Gene_name | Experimentally Verified Resistance Gene Information |
Predicted Resistance Gene Information |
abeM | BacMet ID: BAC0001Code for: Efflux
Family: MATE familySequence: FASTA
Cross-database IDs: Link
Organism: Acinetobacter baumanniLocation: Chromosome
Compound: 4,6-diamidino-2-phenylindole (DAPI) [class: Diamidine], Triclosan [class: Phenolic compounds], Acriflavine [class: Acridine], Hoechst 33342 [class: Bisbenzimide], Rhodamine 6G [class: Xanthene], Ethidium Bromide [class: Phenanthridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)]Description: H-coupled multidrug efflux pump. Confers resistance to Antibiotics such as quinolones and aminoglycosides and antibacterial biocides such as dyes, QACs.
Length (amino acid): 448
Reference: Su et al. 2005; Pubmed- 16189122
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Similar resistance genes in 'BacMet Predicted database' |
abeS | BacMet ID: BAC0002Code for: Efflux
Family: Small multidrug resistance (SMR) familySequence: FASTA
Cross-database IDs: Link
Organism: Acinetobacter baumanniiLocation: Chromosome
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Chlorhexidine [class: Biguanides], Pyronin Y [class: Xanthene], Rhodamine 6G [class: Xanthene], Methyl Viologen [class: Paraquat], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], 4,6-diamidino-2-phenylindole (DAPI) [class: Diamindine], Acridine Orange [class: Acridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Deoxycholate (SDC) [class: Acid], Crystal Violet [class: Triarylmethane], Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Cetylpyridinium Chloride (CPC) [class: Quaternary Ammonium Compounds (QACs)], Dequalinium [class: Quaternary Ammonium Compounds (QACs)]Description: Disinfectant resistance protein abeS. It can confer resistance to antibiotics such as erythromycin, novomycin, amikacin, ciprofloxacin, norfloxacin, tetracycline, trimethoporin and dyes, QACs etc.
Length (amino acid): 109
Reference: Srinivasan et al. 2009; Pubmed- 19770280
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Similar resistance genes in 'BacMet Predicted database' |
acn | BacMet ID: BAC0003Code for: Enzyme
Family: Aconitase familySequence: FASTA
Cross-database IDs: Link
Organism: Mycobacterium tuberculosis H37RvLocation: Chromosome
Compound: Iron (Fe)Description: Aconitate hydratase, Acn
Length (amino acid): 943
Reference: Wong et al. 1999; Pubmed- 9864233
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Similar resistance genes in 'BacMet Predicted database' |
acr3 | BacMet ID: BAC0004Code for: Efflux
Family: Acr3 familySequence: FASTA
Cross-database IDs: Link
Organism: Campylobacter jejuniLocation: Chromosome
Compound: Arsenic (As)Description: Arsenical-resistance membrane transporter; part of the an arsenic (ars) four-gene operon, containing genes encoding a putative membrane permease (ArsP), a transcriptional repressor (ArsR), an arsenate reductase (ArsC) and an arsenical-resistance membrane transporter (Acr3)
Length (amino acid): 347
Reference: Wang et al. 2009; Pubmed- 19502436
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Similar resistance genes in 'BacMet Predicted database' |
acrA | BacMet ID: BAC0005Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Acriflavine [class: Acridine], Phenol [class: Phenolic compounds], Triclosan [class: Phenolic compounds], p-xylene [class: Aromatic hydrocarbons], Cyclohexane [class: Cycloalkane], Pentane [class: Alkane]Description: AcrAB is a drug efflux protein with a broad substrate specificity. It can confer resistant to ampicillin, chloramphenicol as well. It requires TolC outer memberane protein to function and form the AcrAB-TolC efflux operon. AcrAB-TolC is a drug efflux protein complex with broad substrate specificity that uses the proton motive force to export substrates.
Length (amino acid): 397
Reference: Ma et al. 1993; Pubmed- 8407802, Ma et al. 1995; Pubmed- 7651136, White et al. 1997; Pubmed- 9324261, Aono et al. 1998, Pubmed- 9473050, Fralick et al. 1996; Pubmed- 8824631
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Similar resistance genes in 'BacMet Predicted database' |
acrB | BacMet ID: BAC0006Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Acriflavine [class: Acridine], Phenol [class: Phenolic compounds], Triclosan [class: Phenolic compounds], p-xylene [class: Aromatic hydrocarbons], Cyclohexane [class: Cycloalkane], Pentane [class: Alkane]Description: AcrAB is a drug efflux protein with a broad substrate specificity. It can confer resistant to ampicillin, chloramphenicol as well.It requires TolC outer memberane protein to function and form the AcrAB-TolC efflux operon. AcrAB-TolC is a drug efflux protein complex with broad substrate specificity that uses the proton motive force to export substrates.
Length (amino acid): 1049
Reference: Ma et al. 1995; Pubmed- 7651136, White et al. 1997; Pubmed- 9324261, Aono et al. 1998; Pubmed- 9473050, Fralick et al. 1996; Pubmed- 8824631
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Similar resistance genes in 'BacMet Predicted database' |
acrC | BacMet ID: BAC0007Code for: Efflux
Family: RND Superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Acriflavine [class: Acridine]Description: Cation/multidrug efflux system outer membrane porin arcC.
Length (amino acid): 486
Reference: Nakamura et al. 1979; Pubmed- 378962
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Similar resistance genes in 'BacMet Predicted database' |
acrD | BacMet ID: BAC0563Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Salmonella enterica serovar TyphimuriumLocation: Chromosome
Compound: Copper (Cu), Zinc (Zn)Description: Acriflavine resistance protein D; participates in the efflux of aminoglycosides. It confers resistance to a variety of these substances. It contributes to copper and zinc resistance in Salmonella.
Length (amino acid): 1037
Reference: Nishino et al. 2007; Pubmed- 17933888
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Similar resistance genes in 'BacMet Predicted database' |
acrD/yffA | BacMet ID: BAC0008Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Deoxycholate (SDC) [class: Acid]Description: Acriflavine resistance protein D; participates in the efflux of aminoglycosides. It confers resistance to a variety of these substances.
Length (amino acid): 1037
Reference: Nishino et al. 2001; Pubmed- 11566977, Nakamura et al. 1979; Pubmed- 378962
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Similar resistance genes in 'BacMet Predicted database' |
acrE/envC | BacMet ID: BAC0009Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Acriflavine [class: Acridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Deoxycholate (SDC) [class: Acid], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Methyl Viologen [class: Paraquat], Ethidium Bromide [class: Phenanthridine]Description: Acriflavine resistance protein E; May affect specific membrane functions, such as septum formation during cell division, and cell membrane permeability. It can confer resistance to novomycin.
Length (amino acid): 385
Reference: Klein et al. 1991; Pubmed- 1720861, Ma et al. 1993; Pubmed- 8407802, Nishino et al. 2001; Pubmed- 11566977
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Similar resistance genes in 'BacMet Predicted database' |
acrF/envD | BacMet ID: BAC0010Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Acriflavine [class: Acridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Deoxycholate (SDC) [class: Acid], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Methyl Viologen [class: Paraquat], Ethidium Bromide [class: Phenanthridine]Description: Acriflavine resistance protein F; Involved in cell envelope formation. It is produced in extremely low amounts.
Length (amino acid): 1034
Reference: Klein et al. 1991; Pubmed- 1720861, Nishino et al. 2001; Pubmed- 11566977
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Similar resistance genes in 'BacMet Predicted database' |
acrR/ybaH | BacMet ID: BAC0011Code for: Regulator
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Acriflavine [class: Acridine]Description: HTH-type potential regulator protein for the acrAB genes.
Length (amino acid): 215
Reference: Ma et al. 1996; Pubmed- 8821940
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Similar resistance genes in 'BacMet Predicted database' |
actA | BacMet ID: BAC0567Code for: Enzyme
Family: CN hydrolase family. Apolipoprotein N-acyltransferase subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Rhizobium meliloti TG2-6Location: Chromosome
Compound: Copper (Cu), Zinc (Zn), Hydrochloric acid (HCl) [class: Acid]Description: Apolipoprotein N-acyltransferase. Transfers the fatty acyl group on membrane lipoproteins. It has an essential role in acid tolerance of Rhizobium meliloti.
Length (amino acid): 531
Reference: Tiwari et al. 1996; Pubmed- 8868435, Reeve et al. 2002; Pubmed- 11936079
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Similar resistance genes in 'BacMet Predicted database' |
actP | BacMet ID: BAC0012Code for: Enzyme
Family: Cation transport ATPase (P-type) familySequence: FASTA
Cross-database IDs: Link
Organism: Sinorhizobium medicae (strain WSM419) (Ensifer medicae)Location: Plasmid pSMED01 (Sinorhizobium medicae (strain WSM419))
Compound: Copper (Cu), Sodium acetate [class: Acetate]Description: Copper-transporting P-type ATPase; Involved in copper efflux; Transcriptionally regulated by HmrR in response to Cu+ ions.
Length (amino acid): 827
Reference: Reeve et al. 2002; Pubmed- 11936079
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Similar resistance genes in 'BacMet Predicted database' |
actP | BacMet ID: BAC0568Code for: Enzyme
Family: Cation transport ATPase (P-type) familySequence: FASTA
Cross-database IDs: Link
Organism: Rhizobium leguminosarum bv. ViciaeLocation: Chromosome
Compound: Copper (Cu)Description: Copper-transporting P-type ATPase. Involved in copper efflux. Transcriptionally regulated by HmrR in response to Cu+ ions.
Length (amino acid): 841
Reference: Reeve et al. 2002; Pubmed- 11936079
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Similar resistance genes in 'BacMet Predicted database' |
actP | BacMet ID: BAC0570Code for: Membrane transporter/Enzyme
Family: Sodium:solute symporter (SSF) familySequence: FASTA
Cross-database IDs: Link
Organism: Rhodobacter capsulatus B100Location: Chromosome
Compound: Tellurium (Te)Description: Acetate Permease (ActP) is responsible for tellurite uptake and resistance in cells of the facultative phototroph Rhodobacter capsulatus.
Length (amino acid): 551
Reference: Borghese et al. 2010; Pubmed- 19966028
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Similar resistance genes in 'BacMet Predicted database' |
actP/yjcG | BacMet ID: BAC0564Code for: Membrane transporter/Enzyme
Family: Sodium:solute symporter (SSF) familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Sodium Glycocholate [class: Acid], Sodium acetate [class: Acetate]Description: Transports acetate. Also able to transport glycolate.
Length (amino acid): 549
Reference: Gimenez et al. 2003; Pubmed- 14563880
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Similar resistance genes in 'BacMet Predicted database' |
actR | BacMet ID: BAC0565Code for: Regulator
Family: Contains 1 response regulatory domain.Sequence: FASTA
Cross-database IDs: Link
Organism: Rhizobium meliloti strain WSM419Location: Chromosome
Compound: Cadmium (Cd), Zinc (Zn), Hydrochloric acid (HCl) [class: Acid], Sodium azide [class: Azide]Description: Acid tolerance regulatory protein ActR. Member of the two-component regulatory system ActS/ActR acting in acid tolerance. These data implicate that a two-component sensor may be involved in pH sensing and/or response.
Length (amino acid): 194
Reference: Tiwari et al. 1996; Pubmed- 8757734, Glen et al. 1999; Pubmed- 10207916, Reeve et al. 2002; Pubmed- 11936079
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Similar resistance genes in 'BacMet Predicted database' |
actS | BacMet ID: BAC0566Code for: Regulator
Family: Contains histidine kinase domainSequence: FASTA
Cross-database IDs: Link
Organism: Rhizobium meliloti strain WSM419Location: Chromosome
Compound: Cadmium (Cd), Zinc (Zn), Hydrochloric acid (HCl) [class: Acid], Sodium azide [class: Azide]Description: Member of the two-component regulatory system ActS/ActR acting in acid tolerance. These data implicate that a two-component sensor may be involved in pH sensing and/or response.
Length (amino acid): 433
Reference: Tiwari et al. 1996; Pubmed- 8757734, Glen et al. 1999; Pubmed- 10207916, Reeve et al. 2002; Pubmed- 11936079
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Similar resistance genes in 'BacMet Predicted database' |
adeA | BacMet ID: BAC0471Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Acinetobacter baumanniLocation: Chromosome
Compound: Pyronin Y [class: Xanthene], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Acriflavine [class: Acridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], 4,6-diamidino-2-phenylindole (DAPI) [class: Diamindine], Sodium Deoxycholate (SDC) [class: Acid], Ethidium Bromide [class: Phenanthridine], Methyl Viologen [class: Paraquat], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Rhodamine 123 [class: Xanthene], Synergize [class: QAC-Glutaraldehyde], Wex-cide-128 [class: Phenyl]Description: AdeA membrane fusion protein. Part of the AdeABC efflux system. Confers resistance to antibiotics such as aminoglycosides, beta-lactams, chloramphenicol, tetracycline, tigercycline, trimethoprim, fluoroquinolones and other antibacterial compounds such as dyes, diamidines, biguanides, QACs and anionic detergents.
Length (amino acid): 396
Reference: Rajamohan et al. 2010; Pubmed- 20008046, Magnet et al. 2001; Pubmed- 11709311
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Similar resistance genes in 'BacMet Predicted database' |
adeB | BacMet ID: BAC0472Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Acinetobacter baumanniLocation: Chromosome
Compound: Pyronin Y [class: Xanthene], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Acriflavine [class: Acridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], 4,6-diamidino-2-phenylindole (DAPI) [class: Diamindine], Sodium Deoxycholate (SDC) [class: Acid], Ethidium Bromide [class: Phenanthridine], Methyl Viologen [class: Paraquat], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Rhodamine 123 [class: Xanthene], Synergise, Wex-cide-128.Description: AdeB RND protein. Part of the AdeABC efflux system. Confers resistance to antibiotics such as aminoglycosides, beta-lactams, chloramphenicol, tetracycline, tigercycline, trimethoprim, fluoroquinolones and other antibacterial compounds such as dyes, diamidines, biguanides, QACs and anionic detergents.
Length (amino acid): 1035
Reference: Rajamohan et al. 2010; Pubmed- 20008046, Magnet et al. 2001; Pubmed- 11709311
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Similar resistance genes in 'BacMet Predicted database' |
adeC | BacMet ID: BAC0473Code for: Efflux
Family: RND Superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Acinetobacter baumanniLocation: Chromosome
Compound: Pyronin Y [class: Xanthene], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Acriflavine [class: Acridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], 4,6-diamidino-2-phenylindole (DAPI) [class: Diamindine], Sodium Deoxycholate (SDC) [class: Acid], Ethidium Bromide [class: Phenanthridine], Methyl Viologen [class: Paraquat], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Rhodamine 123 [class: Xanthene], Synergize [class: QAC-Glutaraldehyde], Wex-cide-128 [class: Phenyl]Description: AdeC outer membrane protein. Part of the AdeABC efflux system. Confers resistance to antibiotics such as aminoglycosides, beta-lactams, chloramphenicol, tetracycline, tigercycline, trimethoprim, fluoroquinolones and other antibacterial compounds such as dyes, diamidines, biguanides, QACs and anionic detergents.
Length (amino acid): 465
Reference: Rajamohan et al. 2010; Pubmed- 20008046, Magnet et al. 2001; Pubmed- 11709311
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Similar resistance genes in 'BacMet Predicted database' |
adeD | BacMet ID: BAC0474Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Acinetobacter sp. 4365Location: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine]Description: Resistance-nodulation-cell division efflux system AdeDE in Acinetobacter; AdeDE increases the host resistance to ceftazidime and rifampicin. The outer-membrane protein (OMP) for AdeDE has not been identified yet (Oct 2013).
Length (amino acid): 374
Reference: Chau et al. 2004; Pubmed- 15388479
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Similar resistance genes in 'BacMet Predicted database' |
adeE | BacMet ID: BAC0013Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Acinetobacter sp. 4356Location: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine]Description: Resistance-nodulation-cell division efflux system AdeDE in Acinetobacter. AdeDE increases the host resistance to ceftazidime and rifampicin. The outer-membrane protein (OMP) for AdeDE has not been identified yet (Oct 2013).
Length (amino acid): 1036
Reference: Chau et al. 2004; Pubmed- 15388479
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Similar resistance genes in 'BacMet Predicted database' |
adeF | BacMet ID: BAC0014Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Acinetobacter baumanniLocation: Chromosome
Compound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Ethidium Bromide [class: Phenanthridine], Safranin O [class: Azin], Acridine Orange [class: Acridine]Description: Putative RND family drug transporter AdeF; Part of AdeFGH efflux system. Confers resistance to antibiotics such as tetracyclines, chloramphenicol, fluoroquinolones, trimethoprim and other antibacterial biocides such as dyes, anionic detergents.
Length (amino acid): 406
Reference: Coyne et al. 2010; Pubmed- 20696879
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Similar resistance genes in 'BacMet Predicted database' |
adeG | BacMet ID: BAC0015Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Acinetobacter baumannii (strain AB0057)Location: Chromosome
Compound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Ethidium Bromide [class: Phenanthridine], Safranin O [class: Azin], Acridine Orange [class: Acridine]Description: Cation/multidrug efflux pump AdeG; Part of AdeFGH efflux system. Confers resistance to antibiotics such as tetracyclines, chloramphenicol, fluoroquinolones, trimethoprim and other antibacterial biocides such as dyes, anionic detergents.
Length (amino acid): 1059
Reference: Coyne et al. 2010; Pubmed- 20696879
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Similar resistance genes in 'BacMet Predicted database' |
adeH | BacMet ID: BAC0016Code for: Efflux
Family: RND Superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Acinetobacter baumannii (strain AB0057)Location: Chromosome
Compound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Ethidium Bromide [class: Phenanthridine], Safranin O [class: Azin], Acridine Orange [class: Acridine]Description: Putative RND family drug transporter AdeH; Part of AdeFGH efflux system. Confers resistance to antibiotics such as tetracyclines, chloramphenicol, fluoroquinolones, trimethoprim and other antibacterial biocides such as dyes, anionic detergents.
Length (amino acid): 483
Reference: Coyne et al. 2010; Pubmed- 20696879
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Similar resistance genes in 'BacMet Predicted database' |
adeI | BacMet ID: BAC0017Code for: efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Acinetobacter baumannii (strain AB0057)Location: Chromosome
Compound: Acridine Orange [class: Acridine], Safranin O [class: Azin], Pyronin Y [class: Xanthene], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Acriflavine [class: Acridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Crystal Violet [class: Triarylmethane], 4,6-diamidino-2-phenylindole (DAPI) [class: Diamidine], Sodium Deoxycholate (SDC) [class: Acid], Ethidium Bromide [class: Phenanthridine], Methyl Viologen [class: Paraquat], Rhodamine 123 [class: Xanthene], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Synergize [class: QAC-Glutaraldehyde], Virkon S [class: Peroxysulfate], Wex-cide-128 [class: Phenyl]Description: Part of AdeIJK MDR pump. Contributes to resistance to beta-lactams, chloramphenicol, tetracycline, erythromycin, lincosamides, fluoroquinolines, fusidic acid, tigecycline, novobiocin, rifampin, trimethoprim and dyes such as acridine, safranin, pyronin, and anionic detergents such as sodium dodecyl sulfate.
Length (amino acid): 416
Reference: Damier-Piolle et al. 2008; Pubmed- 18086852, Rajamohan et al. 2010; Pubmed- 20008046
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Similar resistance genes in 'BacMet Predicted database' |
adeJ | BacMet ID: BAC0018Code for: efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Acinetobacter baumannii (strain AB0057)Location: Chromosome
Compound: Acridine Orange [class: Acridine], Safranin O [class: Azin], Pyronin Y [class: Xanthene], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate]Description: Part of AdeIJK MDR pump. Contributes to resistance to beta-lactams, chloramphenicol, tetracycline, erythromycin, lincosamides, fluoroquinolines, fusidic acid, tigecycline, novobiocin, rifampin, trimethoprim and dyes such as acridine, safranin, pyronin, and anionic detergents such as sodium dodecyl sulfate.
Length (amino acid): 1058
Reference: Damier-Piolle et al. 2008; Pubmed- 18086852, Rajamohan et al. 2010; Pubmed- 20008046
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Similar resistance genes in 'BacMet Predicted database' |
adeK | BacMet ID: BAC0019Code for: efflux
Family: RND Superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Acinetobacter baumannii (strain AB0057)Location: Chromosome
Compound: Acridine Orange [class: Acridine], Safranin O [class: Azin], Pyronin Y [class: Xanthene], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate]Description: Part of AdeIJK MDR pump. Contributes to resistance to beta-lactams, chloramphenicol, tetracycline, erythromycin, lincosamides, fluoroquinolines, fusidic acid, tigecycline, novobiocin, rifampin, trimethoprim and dyes such as acridine, safranin, pyronin, and anionic detregents such as sodium dodecyl sulfate.
Length (amino acid): 484
Reference: Damier-Piolle et al. 2008; Pubmed- 18086852, Rajamohan et al. 2010; Pubmed- 20008046
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Similar resistance genes in 'BacMet Predicted database' |
adeL | BacMet ID: BAC0508Code for: Regulator
Family: LysR familySequence: FASTA
Cross-database IDs: Link
Organism: Acinetobacter baumanniLocation: Chromosome
Compound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Ethidium Bromide [class: Phenanthridine], Safranin O [class: Azin], Acridine Orange [class: Acridine]Description: Regulator of adeFGH efflux system
Length (amino acid): 337
Reference: Coyne et al. 2010; Pubmed: 20696879
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Similar resistance genes in 'BacMet Predicted database' |
adeN | BacMet ID: BAC0496Code for: Regulator
Family: TetR familySequence: FASTA
Cross-database IDs: Link
Organism: Acinetobacter baumanniLocation: Chromosome
Compound: Safranin O [class: Azin], Acridine Orange [class: Acridine], Pyronin Y [class: Xanthene], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate]Description: Repressor of AdeIJK expression
Length (amino acid): 217
Reference: Rosenfield et al. 2012; Pubmed: 22371895
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Similar resistance genes in 'BacMet Predicted database' |
adeT1 | BacMet ID: BAC0478Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Acinetobacter baumanni AC0037Location: Chromosome
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Acriflavine [class: Acridine], Rhodamine 123 [class: Xanthene], Methyl Viologen [class: Paraquat], 4,6-diamidino-2-phenylindole (DAPI) [class: Diamindine], Acridine Orange [class: Acridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Deoxycholate (SDC) [class: Acid], Synergize [class: QAC-Glutaraldehyde], Wex-cide-128 [class: Phenyl]Description: It can confer resistant to antibiotics such as chloramphenicol, novobiocin, gentamicin, kanamycin, nalidixic acid, tetracycline etc.
Length (amino acid): 304
Reference: Srinivasan et al. 2011; Pubmed- 21212056
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Similar resistance genes in 'BacMet Predicted database' |
adeT2 | BacMet ID: BAC0479Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Acinetobacter baumanniLocation: Chromosome
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Rhodamine 123 [class: Xanthene], Methyl Viologen [class: Paraquat], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], 4,6-diamidino-2-phenylindole (DAPI) [class: Diamindine], Acridine Orange [class: Acridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Deoxycholate (SDC) [class: Acid], Crystal Violet [class: Triarylmethane], Synergize [class: QAC-Glutaraldehyde], Wex-cide-128 [class: Phenyl]Description: It can confer resistant to antibiotics such as chloramphenicol, novobiocin, gentamicin, kanamycin, nalidixic acid, ciprofloxacin, erythromycin etc.
Length (amino acid): 238
Reference: Srinivasan et al. 2011; Pubmed- 21212056
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Similar resistance genes in 'BacMet Predicted database' |
aioA/aoxB | BacMet ID: BAC0020Code for: Enzyme
Family: Prokaryotic molybdopterin-containing oxidoreductase family.Sequence: FASTA
Cross-database IDs: Link
Organism: Herminiimonas arsenicoxydansLocation: Chromosome
Compound: Arsenic (As)Description: It is a structural gene which codes for small subunit of Arsenite oxidase aioAB; Involved in the detoxification of arsenic. Oxidizes As(III)O3- (arsenite) to the somewhat less toxic As(V)O4- (arsenate).
Length (amino acid): 826
Reference: Muller et al. 2003; Pubmed- 12486049, Cai et al. 2009; Pubmed- 19283378, Drewniak et al. 2013 Pubmed- 23454063,
|
Similar resistance genes in 'BacMet Predicted database' |
aioB/aoxA | BacMet ID: BAC0021Code for: Enzyme
Family: Contains 1 Rieske domainSequence: FASTA
Cross-database IDs: Link
Organism: Herminiimonas arsenicoxydansLocation: Chromosome
Compound: Arsenic (As)Description: It is a structural gene which codes for small subunit of Arsenite oxidase, AioAB; Involved in the detoxification of arsenic. Oxidizes As(III)O3- (arsenite) to the somewhat less toxic As(V)O4- (arsenate).
Length (amino acid): 173
Reference: Muller et al. 2003; Pubmed- 12486049, Cai et al. 2009; Pubmed- 19283378, Drewniak et al. 2013 Pubmed- 23454063
|
Similar resistance genes in 'BacMet Predicted database' |
aioR/aoxR | BacMet ID: BAC0022Code for: Regulator
Family: Contains 1 sigma-54 factor interaction and 1 sigma-5factor interaction domainSequence: FASTA
Cross-database IDs: Link
Organism: Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter)Location: Chromosome
Compound: Arsenic (As)Description: Transcriptional regulator. Part of a two-component As(III) responsive system (AioSR)
Length (amino acid): 442
Reference: Kashyap et al. 2006; Pubmed- 16428412; Drewniak et al. 2013 Pubmed- 23454063, Muller et al. 2003; Pubmed- 12486049
|
Similar resistance genes in 'BacMet Predicted database' |
aioS/aoxS | BacMet ID: BAC0023Code for: Regulator
Family: Contains histidine kinase domainSequence: FASTA
Cross-database IDs: Link
Organism: Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter)Location: Chromosome
Compound: Arsenic (As)Description: Sensor histidine kinase; signal transduction protein
Length (amino acid): 488
Reference: Kashyap et al. 2006; Pubmed- 16428412; Drewniak et al. 2013 Pubmed- 23454063, Muller et al. 2003; Pubmed- 12486049
|
Similar resistance genes in 'BacMet Predicted database' |
aioX/aoxX | BacMet ID: BAC0024Code for: Binding protein
Family: ABC transporter superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter)Location: Chromosome
Compound: Arsenic (As)Description: A periplasmic oxyanion-binding protein involved in regulating arsenite oxidation
Length (amino acid): 306
Reference: Liu et al. 2012; Pubmed- 22176720, Cai et al. 2009; Pubmed- 19283378
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Similar resistance genes in 'BacMet Predicted database' |
ALU1-P | BacMet ID: BAC0489Code for: Enzyme
Family: QueC family proteinSequence: FASTA
Cross-database IDs: Link
Organism: Arthrobacter viscosus ALRJJ6Location: Chromosome
Compound: Aluminium (Al)Description: Fragment of the ALU1 resistance gene called ALU1-P but the frament has the potential to confer tolerance to aluminium . It has 65% identity in amino acid level with the protein of YbaX gene in Escherichia coli, and 51.1% identity with YB91 Haein hypothetical protein of HI1191 gene in Haemophilus influenzae.
Length (amino acid): 192
Reference: Jo et al. 1997; Pubmed- 9367855
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Similar resistance genes in 'BacMet Predicted database' |
amvA | BacMet ID: BAC0025Code for: Efflux
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Acinetobacter baumanniiLocation: Chromosome
Compound: Acriflavine [class: Acridine], Chlorhexidine [class: Biguanides], Methyl Viologen [class: Paraquat], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Sodium Deoxycholate (SDC) [class: Acid]Description: MFS efflux pump, AmvA (AedF). Mediates drugs, dyes, detergents, antibiotic and disinfectant resistance
Length (amino acid): 492
Reference: Rajamohan et al. 2010; Pubmed- 20573661
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Similar resistance genes in 'BacMet Predicted database' |
arsA | BacMet ID: BAC0030Code for: Enzyme
Family: ArsA ATPase familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coliLocation: Plasmid IncN R46
Compound: Arsenic (As), Antimony (Sb)Description: Anion-transporting ATPase; Determinants of a membrane-associated oxyanion-stimulated ATPase protein; energizes the arsenite efflux pump by ATP hydrolysis; Catalyzes the extrusion of the oxyanions arsenite, antimonite and arsenate. Maintenance of a low intracellular concentration of oxyanion produces resistance to the toxic agents.
Length (amino acid): 583
Reference: Bruhn et al. 1996; Pubmed- 8674982
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Similar resistance genes in 'BacMet Predicted database' |
arsA | BacMet ID: BAC0571Code for: Enzyme
Family: ArsA ATPase familySequence: FASTA
Cross-database IDs: Link
Organism: Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301)Location: Plasmid pKW301
Compound: Arsenic (As), Antimony (Sb)Description: Anion-transporting ATPase. Catalyzes the extrusion of the oxyanions arsenite, antimonite and arsenate. Maintenance of a low intracellular concentration of oxyanion produces resistance to the toxic agents.
Length (amino acid): 583
Reference: Suzuki et al. 1998; Pubmed- 9464374
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Similar resistance genes in 'BacMet Predicted database' |
arsA | BacMet ID: BAC0572Code for: Enzyme
Family: ArsA ATPase familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coliLocation: Plasmid R773
Compound: Arsenic (As), Antimony (Sb)Description: Anion-transporting ATPase. Catalyzes the extrusion of the oxyanions arsenite, antimonite and arsenate. Maintenance of a low intracellular concentration of oxyanion produces resistance to the toxic agents.
Length (amino acid): 583
Reference: Chen et al. 1986; Pubmed- 3021763
|
Similar resistance genes in 'BacMet Predicted database' |
arsB | BacMet ID: BAC0031Code for: Efflux
Family: ArsB familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coliLocation: Plasmid R773 (E. coli), Plasmid IncN R46 (E. coli), Plasmid R46 (Salmonella typhimurium)
Compound: Arsenic (As), Antimony (Sb)Description: Arsenic pump membrane protein, located in cell inner membrane. Involved in arsenite and antimonite resistance. Thought to form a channel of an arsenite pump.
Length (amino acid): 429
Reference: Tisa et al. 1990; Pubmed- 1688427, Chen et al. 1986; Pubmed- 3021763
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Similar resistance genes in 'BacMet Predicted database' |
arsB | BacMet ID: BAC0573Code for: Regulator
Family: ACR3 familySequence: FASTA
Cross-database IDs: Link
Organism: Bacillus subtilis (strain 168)Location: Chromosome
Compound: Arsenic (As)Description: Seems to confer resistance to arsenite by allowing cells to extrude this compound. Could be part of an arsenite extrusion pump. Deletion of the arsB gene results in both an aresenite- and arsenate-sensitive phenotype in the absence of IPTG.
Length (amino acid): 346
Reference: Sato et al. 1998; Pubmed- 9537360
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Similar resistance genes in 'BacMet Predicted database' |
arsB | BacMet ID: BAC0574Code for: Efflux
Family: ArsB familySequence: FASTA
Cross-database IDs: Link
Organism: Staphylococcus aureusLocation: Plasmid pI258
Compound: Arsenic (As), Antimony (Sb)Description: Involved in arsenical resistance. Thought to form the channel of an arsenite pump.
Length (amino acid): 429
Reference: Ji and Silver 1992; Pubmed- 1534328
|
Similar resistance genes in 'BacMet Predicted database' |
arsB | BacMet ID: BAC0575Code for: Efflux
Family: ArsB familySequence: FASTA
Cross-database IDs: Link
Organism: Staphylococcus xylosusLocation: Plasmid pSX267
Compound: Arsenic (As), Antimony (Sb)Description: Involved in arsenical resistance. Thought to form the channel of an arsenite pump.
Length (amino acid): 429
Reference: Rosenstein et al. 1992; Pubmed- 1534327
|
Similar resistance genes in 'BacMet Predicted database' |
arsB | BacMet ID: BAC0576Code for: Efflux
Family: ArsB familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coliLocation: Plasmid IncN R46
Compound: Arsenic (As), Antimony (Sb)Description: Involved in arsenical resistance. Thought to form the channel of an arsenite pump.
Length (amino acid): 429
Reference: Bruhn et al. 1996; Pubmed- 8674982
|
Similar resistance genes in 'BacMet Predicted database' |
arsB | BacMet ID: BAC0577Code for: Efflux
Family: ArsB familySequence: FASTA
Cross-database IDs: Link
Organism: Yersinia enterocoliticaLocation: Plasmid pYV
Compound: Arsenic (As)Description: Involved in arsenical resistance. Thought to form the channel of an arsenite pump.
Length (amino acid): 429
Reference: Neyt et al. 1997; Pubmed- 9006011
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Similar resistance genes in 'BacMet Predicted database' |
arsB | BacMet ID: BAC0578Code for: Efflux
Family: ArsB familySequence: FASTA
Cross-database IDs: Link
Organism: Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301)Location: Plasmid pKW301
Compound: Arsenic (As), Antimony (Sb)Description: Part of arsenic resistance operon of Acidiphilium multivorum AIU 301 plasmid pKW301.
Length (amino acid): 429
Reference: Suzuki et al. 1998; Pubmed- 9464374
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Similar resistance genes in 'BacMet Predicted database' |
arsB | BacMet ID: BAC0579Code for: Efflux
Family: ACR3 family.Sequence: FASTA
Cross-database IDs: Link
Organism: Synechocystis sp. PCC 6803Location: Chromosome
Compound: Arsenic (As), Antimony (Sb)Description: Able to export both As(III) and Sb(III) and providies a example of convergent evolution between both families of arsenite transporters.
Length (amino acid): 383
Reference: Lopez-Maury et al. 2003; Pubmed- 12949088
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Similar resistance genes in 'BacMet Predicted database' |
arsC | BacMet ID: BAC0032Code for: Enzyme
Family: Low molecular weight phosphotyrosine protein phosphatase superfamily. ArsC family.Sequence: FASTA
Cross-database IDs: Link
Organism: Staphylococcus aureusLocation: Plasmid pI258
Compound: Arsenic (As)Description: Arsenate reductase. Reduces arsenate [As(V)] to arsenite [As(III)] and dephosphorylates tyrosine phosphorylated proteins, low-MW aryl phosphates and natural and synthetic acyl phosphates. Could switch between different functions in different circumstances.
Length (amino acid): 131
Reference: Ji and Silver 1992; Pubmed- 1534328; Chen et al. 1986; Pubmed- 3021763
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Similar resistance genes in 'BacMet Predicted database' |
arsC | BacMet ID: BAC0580Code for: Enzyme
Family: Low molecular weight phosphotyrosine protein phosphatase superfamily. ArsC family.Sequence: FASTA
Cross-database IDs: Link
Organism: Staphylococcus xylosusLocation: Plasmid pSX267
Compound: Arsenic (As)Description: Arsenate reductase. Reduces arsenate [As(V)] to arsenite [As(III)] and dephosphorylates tyrosine phosphorylated proteins, low-MW aryl phosphates and natural and synthetic acyl phosphates. Could switch between different functions in different circumstances.
Length (amino acid): 131
Reference: Rosenstein et al. 1992; Pubmed- 1534327
|
Similar resistance genes in 'BacMet Predicted database' |
arsC | BacMet ID: BAC0581Code for: Enzyme
Family: Low molecular weight phosphotyrosine protein phosphatase superfamily. ArsC family.Sequence: FASTA
Cross-database IDs: Link
Organism: Bacillus subtilis (strain 168)Location: Chromosome
Compound: Arsenic (As)Description: Arsenate reductase. Reduces arsenate [As(V)] to arsenite [As(III)] and dephosphorylates tyrosine phosphorylated proteins, low-MW aryl phosphates and natural and synthetic acyl phosphates. Could switch between different functions in different circumstances.
Length (amino acid): 139
Reference: Sato et al. 1998; Pubmed- 9537360
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Similar resistance genes in 'BacMet Predicted database' |
arsC | BacMet ID: BAC0582Code for: Enzyme
Family: arsC familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coliLocation: Plasmid R773
Compound: Arsenic (As), Antimony (Sb)Description: Reduction of arsenate [As(V)] to arsenite [As(III)]. This protein expands the substrate specificity of ArsAB pump which can extrude arsenite and antimonite to allow for arsenate pumping and resistance.
Length (amino acid): 141
Reference: Tisa et al. 1990; Pubmed- 1688427, Chen et al. 1986; Pubmed- 3021763
|
Similar resistance genes in 'BacMet Predicted database' |
arsC | BacMet ID: BAC0583Code for: Enzyme
Family: arsC familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coliLocation: Plasmid IncN R46
Compound: Arsenic (As), Antimony (Sb)Description: Reduction of arsenate [As(V)] to arsenite [As(III)]. This protein expands the substrate specificity of ArsAB pump which can extrude arsenite and antimonite to allow for arsenate pumping and resistance.
Length (amino acid): 141
Reference: Bruhn et al. 1996; Pubmed- 8674982
|
Similar resistance genes in 'BacMet Predicted database' |
arsC | BacMet ID: BAC0584Code for: Enzyme
Family: arsC familySequence: FASTA
Cross-database IDs: Link
Organism: Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301)Location: Plasmid pKW301
Compound: Arsenic (As), Antimony (Sb)Description: Reduction of arsenate [As(V)] to arsenite [As(III)]. This protein expands the substrate specificity of ArsAB pump which can extrude arsenite and antimonite to allow for arsenate pumping and resistance
Length (amino acid): 141
Reference: Suzuki et al. 1998; Pubmed- 9464374
|
Similar resistance genes in 'BacMet Predicted database' |
arsC | BacMet ID: BAC0585Code for: Enzyme
Family: arsC familySequence: FASTA
Cross-database IDs: Link
Organism: Yersinia enterocoliticaLocation: Plasmid pYV
Compound: Arsenic (As), Antimony (Sb)Description: Reduction of arsenate [As(V)] to arsenite [As(III)]. This protein expands the substrate specificity of ArsAB pump which can extrude arsenite and antimonite to allow for arsenate pumping and resistance.
Length (amino acid): 141
Reference: Neyt et al. 1997; Pubmed- 9006011
|
Similar resistance genes in 'BacMet Predicted database' |
arsC | BacMet ID: BAC0586Code for: Enzyme
Family: arsC familySequence: FASTA
Cross-database IDs: Link
Organism: Synechocystis sp. PCC 6803Location: Chromosome
Compound: Arsenic (As)Description: Arsenate reductase. Reduces arsenate [As(V)] to arsenite [As(III)].
Length (amino acid): 131
Reference: Lopez-Maury et al. 2003; Pubmed- 12949088
|
Similar resistance genes in 'BacMet Predicted database' |
arsD | BacMet ID: BAC0033Code for: Chaperone
Family: ArsD familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coliLocation: Plasmid R773 (E. coli), Plasmid R64 (Salmonella typhimurium)
Compound: Arsenic (As)Description: An arsenic metallochaperone for an arsenic detoxification pump
Length (amino acid): 120
Reference: Wu et al. 1993; Pubmed- 8326869, Lin et al. 2006; Pubmed- 17030823
|
Similar resistance genes in 'BacMet Predicted database' |
arsD | BacMet ID: BAC0587Code for: Regulator
Family: ArsD familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coliLocation: Plasmid IncN R46
Compound: Arsenic (As), Antimony (Sb)Description: Arsenical resistance operon trans-acting repressor ArsD.
Length (amino acid): 120
Reference: Bruhn et al. 1996; Pubmed- 8674982
|
Similar resistance genes in 'BacMet Predicted database' |
arsH | BacMet ID: BAC0034Code for: Enzyme
Family: NADPH-dependent FMN reductases familySequence: FASTA
Cross-database IDs: Link
Organism: Yersinia pestis Java 9Location: Plasmid pKPN-IT (Klebsiella pneumoniae), Plasmid R485 (Morganella morganii (Proteus morganii))
Compound: Arsenic (As)Description: Arsenical resistance protein ArsH; ArsH is not required for arsenate resistance in some systems; arsH encodes an NADPH-flavin mononucleotide oxidoreductase and has been shown to be involved in arsenic resistance in Yersinia enterocolitica and Sinorhizobium meliloti. It is an essential component in a new four gene arsenical resistance transposon associated operon, arsHRBC.
Length (amino acid): 232
Reference: Neyt et al. 1997; Pubmed- 9006011, Eppinger et al. 2012; Pubmed- 22479347
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Similar resistance genes in 'BacMet Predicted database' |
arsH | BacMet ID: BAC0595Code for: Enzyme
Family: NADPH-dependent FMN reductases familySequence: FASTA
Cross-database IDs: Link
Organism: Synechocystis sp. PCC 6803Location: Chromosome
Compound: Menadione [class: Naphthoquinone]Description: ArsH from Synechocystis sp. does not cofer resistance to arsenic (reduction of arsenate) as the arsH of Synechocystis sp. lacks cyestein residues. arsH encodes an NADPH-flavin mononucleotide oxidoreductase. ArsH plays a role in the response to oxidative stress caused by arsenite.
Length (amino acid): 206
Reference: Hervas et al. 2012; Pubmed- 22304305, Lopez-Maury et al. 2003; Pubmed- 12949088
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Similar resistance genes in 'BacMet Predicted database' |
arsM | BacMet ID: BAC0035Code for: Enzyme
Family: Methyltransferase familySequence: FASTA
Cross-database IDs: Link
Organism: Rhodopseudomonas palustris CGA009Location: Chromosome
Compound: Arsenic (As)Description: Arsenite S-adenosylmethyltransferase; involved in arsenite methyltransferase activity; arsM encodes an arsenite S-adenosylmethionine methyltransferase that methylates arsenite to volatile trimethylarsine, contributing to arsenic detoxification in bacteria.
Length (amino acid): 283
Reference: Qin et al. 2006; Pubmed- 16452170
|
Similar resistance genes in 'BacMet Predicted database' |
arsP | BacMet ID: BAC0036Code for: Enzyme
Family: Major Facilitator Protein (MFP) FamilySequence: FASTA
Cross-database IDs: Link
Organism: Campylobacter jejuniLocation: Chromosome
Compound: Arsenic (As)Description: arsenic resistance membrane permease
Length (amino acid): 315
Reference: Wang et al. 2009; Pubmed- 19502436
|
Similar resistance genes in 'BacMet Predicted database' |
arsR | BacMet ID: BAC0588Code for: Regulator
Family: Contains 1 HTH arsR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Yersinia enterocoliticaLocation: Plasmid pYV
Compound: Arsenic (As)Description: Arsenite inducible repressor ArsR
Length (amino acid): 117
Reference: Neyt et al. 1997; Pubmed- 9006011
|
Similar resistance genes in 'BacMet Predicted database' |
arsR | BacMet ID: BAC0589Code for: Regulator
Family: Contains 1 HTH arsR-type DNA-binding domain.Sequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coliLocation: Plasmid R773
Compound: Arsenic (As), Antimony (Sb), Bismuth (Bi)Description: Transcriptional repressor for the ars operon. ArsR is a trans-acting regulatory protein which controls its own expression. The repressive effect of ArsR is alleviated by oxyions of +III oxidation state of arsenic, antimony, and bismuth, as well as arsenate (As(V)).
Length (amino acid): 117
Reference: Wu and Rosen 1991; Pubmed- 1838573
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Similar resistance genes in 'BacMet Predicted database' |
arsR | BacMet ID: BAC0590Code for: Regulator
Family: Contains 1 HTH arsR-type DNA-binding domain.Sequence: FASTA
Cross-database IDs: Link
Organism: Staphylococcus aureusLocation: Plasmid pI258
Compound: Arsenic (As), Antimony (Sb), Bismuth (Bi)Description: Transcriptional repressor for the ars operon. ArsR is a trans-acting regulatory protein which controls its own expression. The repressive effect of ArsR is alleviated by oxyions of +III oxidation state of arsenic, antimony, and bismuth, as well as arsenate (As(V)).
Length (amino acid): 104
Reference: Ji and Silver 1992; Pubmed- 1534328
|
Similar resistance genes in 'BacMet Predicted database' |
arsR | BacMet ID: BAC0591Code for: Regulator
Family: Contains 1 HTH arsR-type DNA-binding domain.Sequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coliLocation: Plasmid IncN R46
Compound: Arsenic (As), Antimony (Sb), Bismuth (Bi)Description: Transcriptional repressor for the ars operon. ArsR is a trans-acting regulatory protein which controls its own expression. The repressive effect of ArsR is alleviated by oxyions of +III oxidation state of arsenic, antimony, and bismuth, as well as arsenate (As(V)).
Length (amino acid): 117
Reference: Bruhn et al. 1996; Pubmed- 8674982
|
Similar resistance genes in 'BacMet Predicted database' |
arsR | BacMet ID: BAC0592Code for: Regulator
Family: Contains 1 HTH arsR-type DNA-binding domain.Sequence: FASTA
Cross-database IDs: Link
Organism: Staphylococcus xylosusLocation: Plasmid pSX267
Compound: Arsenic (As), Antimony (Sb), Bismuth (Bi)Description: Transcriptional repressor for the ars operon. ArsR is a trans-acting regulatory protein which controls its own expression. The repressive effect of ArsR is alleviated by oxyions of +III oxidation state of arsenic, antimony, and bismuth, as well as arsenate (As(V)).
Length (amino acid): 117
Reference: Rosenstein et al. 1992; Pubmed- 1534327
|
Similar resistance genes in 'BacMet Predicted database' |
arsR | BacMet ID: BAC0593Code for: Regulator
Family: Contains 1 HTH arsR-type DNA-binding domain.Sequence: FASTA
Cross-database IDs: Link
Organism: Bacillus subtilis (strain 168)Location: Chromosome
Compound: Arsenic (As)Description: Transcriptional repressor for the ars operon.
Length (amino acid): 105
Reference: Sato et al. 1998; Pubmed- 9537360
|
Similar resistance genes in 'BacMet Predicted database' |
arsR | BacMet ID: BAC0594Code for: Regulator
Family: Contains 1 HTH arsR-type DNA-binding domain.Sequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Arsenic (As)Description: Transcriptional repressor for the arsEFG operon. ArsE is a trans-acting regulatory protein which controls its own expression. The repressive effect of ArsE is alleviated by oxyions of +III oxidation state of arsenic, antimony, and bismuth, as well as arsenate (As(V)).
Length (amino acid): 117
Reference: Diorio et al. 1995; Pubmed- 7721697
|
Similar resistance genes in 'BacMet Predicted database' |
asr | BacMet ID: BAC0038Code for: Unknown
Family: asr familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Hydrochloric acid (HCl) [class: Acid]Description: Acid shock protein Asr; Required for growth and/or survival at acidic conditions (pH 4.5). Needed for the adaptation process at pH 4.5 that enables cells to survive at extremely low pH (pH 2.0).
Length (amino acid): 102
Reference: Seputiene et al. 2003; Pubmed- 12670971
|
Similar resistance genes in 'BacMet Predicted database' |
baeR | BacMet ID: BAC0039Code for: Regulator
Family: Contains 1 response regulatory domainSequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Zinc (Zn), Tungsten (W), Sodium Deoxycholate (SDC) [class: Acid]Description: Member of the two-component regulatory system BaeS/BaeR. Activates the mdtABCD and probably the casABCDE-ygbT-ygbF operons. Overexpression of BaeR increases resistance to novobiocin and deoxycholate. BaeR upregulates the mdtABCD locus and acrD and thereby increases the resistance to deoxycholate, metals and antibiotics.
Length (amino acid): 240
Reference: Baranova et al. 2002; Pubmed- 12107134, Yamamoto et al. 2008; Pubmed- 17884222, Lee et al. 2005; Pubmed- 15659689, Leblanc et al 2011; Pubmed- 21515766
|
Similar resistance genes in 'BacMet Predicted database' |
baeR | BacMet ID: BAC0596Code for: Regulator
Family: Contains 1 response regulatory domainSequence: FASTA
Cross-database IDs: Link
Organism: Salmonella TyphimuriumLocation: Chromosome
Compound: Copper (Cu), Zinc (Zn), Tungsten (W), Sodium Deoxycholate (SDC) [class: Acid]Description: Member of the two-component regulatory system BaeS/BaeR. Activates BaeR by phosphorylation which then activates the mdtABCD and probably the casABCDE-ygbT-ygbF operons.
Length (amino acid): 240
Reference: Nishino et al. 2007; Pubmed- 17933888, Appia-Ayme et al. 2011; Pubmed- 21886814
|
Similar resistance genes in 'BacMet Predicted database' |
baeS | BacMet ID: BAC0040Code for: Regulator
Family: Contains 1 HAMP domain, 1 histidine kinase domain.Sequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Zinc (Zn), Tungsten (W), Sodium Deoxycholate (SDC) [class: Acid]Description: Member of the two-component regulatory system BaeS/BaeR. Activates BaeR by phosphorylation which then activates the mdtABCD and probably the casABCDE-ygbT-ygbF operons.
Length (amino acid): 467
Reference: Baranova et al. 2002; Pubmed- 12107134, Yamamoto et al. 2008; Pubmed- 17884222, Lee et al. 2005; Pubmed- 15659689, Leblanc et al 2011; Pubmed- 21515766
|
Similar resistance genes in 'BacMet Predicted database' |
baeS | BacMet ID: BAC0597Code for: Regulator
Family: Contains 1 HAMP domain, 1 histidine kinase domain.Sequence: FASTA
Cross-database IDs: Link
Organism: Salmonella TyphimuriumLocation: Chromosome
Compound: Copper (Cu), Zinc (Zn), Tungsten (W), Sodium Deoxycholate (SDC) [class: Acid]Description: Member of the two-component regulatory system BaeS/BaeR. Activates BaeR by phosphorylation which then activates the mdtABCD and probably the casABCDE-ygbT-ygbF operons.
Length (amino acid): 467
Reference: Nishino et al. 2007; Pubmed- 17933888, Appia-Ayme et al. 2011; Pubmed- 21886814
|
Similar resistance genes in 'BacMet Predicted database' |
bcr | BacMet ID: BAC0041Code for: Enzyme
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Acriflavine [class: Acridine]Description: Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance. Probable membrane translocase.
Length (amino acid): 396
Reference: Nishino et al. 2001; Pubmed- 11566977
|
Similar resistance genes in 'BacMet Predicted database' |
bepC | BacMet ID: BAC0042Code for: Efflux
Family: RND superfamily, OMP/TolC familySequence: FASTA
Cross-database IDs: Link
Organism: Brucella suis biovar 1 (strain 1330)Location: Chromosome
Compound: Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Acriflavine [class: Acridine], Crystal Violet [class: Triarylmethane], Ethidium Bromide [class: Phenanthridine], Rhodamine 6G [class: Xanthene], Sodium Deoxycholate (SDC) [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate]Description: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host. Probably part of a tripartite efflux pump, which is composed of an outer membrane efflux protein, an inner membrane protein and a protein that expands the periplasmic space. It can form a tripartite pump with BepD and BepE or with BepF and BepG.
Length (amino acid): 456
Reference: Posada et al. 2007; Pubmed- 17088356
|
Similar resistance genes in 'BacMet Predicted database' |
bepD | BacMet ID: BAC0043Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Brucella suis biovar 1 (strain 1330)Location: Chromosome
Compound: Sodium Deoxycholate (SDC) [class: Acid], Ethidium Bromide [class: Phenanthridine], Crystal Violet [class: Triarylmethane]Description: Efflux pump periplasmic linker BepD. Resistance conferred by BepDE is dependent on BepC. Involved in resistance to several unrelated toxic compounds, such as dyes, detergents and antibiotics such as ampicillin, norfloxacin, ciprofloxacin, tetracycline, and doxycycline.
Length (amino acid): 397
Reference: Martin et al. 2009; Pubmed- 19201794
|
Similar resistance genes in 'BacMet Predicted database' |
bepE | BacMet ID: BAC0044Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Brucella suis biovar 1 (strain 1330)Location: Chromosome
Compound: Sodium Deoxycholate (SDC) [class: Acid], Ethidium Bromide [class: Phenanthridine], Crystal Violet [class: Triarylmethane]Description: Efflux pump membrane transporter BepE. Resistance conferred by BepDE is dependent on BepC. Involved in resistance to several unrelated toxic compounds, such as dyes, detergents and antibiotics.
Length (amino acid): 1051
Reference: Martin et al. 2009; Pubmed- 19201794
|
Similar resistance genes in 'BacMet Predicted database' |
bepF | BacMet ID: BAC0045Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Brucella suis biovar 1 (strain 1330)Location: Chromosome
Compound: Sodium Deoxycholate (SDC) [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate]Description: Efflux pump periplasmic linker BepF; Contribute to resistance to some drugs, such as deoxycholate, sodium dodecyl sulfate and nalidixic acid, in the absence of BepD and BepE
Length (amino acid): 411
Reference: Martin et al. 2009; Pubmed- 19201794
|
Similar resistance genes in 'BacMet Predicted database' |
bepG | BacMet ID: BAC0046Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Brucella suis biovar 1 (strain 1330)Location: Chromosome
Compound: Sodium Deoxycholate (SDC) [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate]Description: Efflux pump membrane transporter BepG; Contributes to resistance to some drugs, such as deoxycholate, sodium dodecyl sulfate and nalidixic acid, in the absence of BepD and BepE.
Length (amino acid): 1074
Reference: Martin et al. 2009; Pubmed- 19201794
|
Similar resistance genes in 'BacMet Predicted database' |
bexA | BacMet ID: BAC0047Code for: Efflux
Family: MATE familySequence: FASTA
Cross-database IDs: Link
Organism: Bacteroides thetaiotaomicronLocation: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine]Description: A MATE family multidrug efflux transporter pump bexA; Confers resistance to norfloxacin, ciprofloxacin, and ethidium bromide
Length (amino acid): 443
Reference: Miyamae et al. 2001; Pubmed- 11709306
|
Similar resistance genes in 'BacMet Predicted database' |
bfrA | BacMet ID: BAC0048Code for: Binding protein
Family: Bacterioferritin familySequence: FASTA
Cross-database IDs: Link
Organism: Mycobacterium tuberculosisLocation: Chromosome
Compound: Iron (Fe)Description: Bacterioferritin bfrA; Iron-storage protein, whose ferroxidase center binds Fe2+ ions, oxidizes them by dioxygen to Fe3+, and participates in the subsequent Fe3+ oxide mineral core formation within the central cavity of the protein complex
Length (amino acid): 159
Reference: Gold et al. 2001; Pubmed- 11722747
|
Similar resistance genes in 'BacMet Predicted database' |
bhsA/ycfR/comC | BacMet ID: BAC0049Code for: Regulator
Family: BhsA/McbA familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Copper (Cu)Description: Seems to be involved in the regulation of biofilm formation. May decrease biofilm formation by repressing cell-cell interaction and cell surface interaction
Length (amino acid): 85
Reference: Zhang et al. 2007; Pubmed- 17293424, Mermod et al. 2012; Pubmed- 22089859
|
Similar resistance genes in 'BacMet Predicted database' |
blt | BacMet ID: BAC0050Code for: Efflux
Family: MFS Superfamily (TCR/tet family)Sequence: FASTA
Cross-database IDs: Link
Organism: Bacillus subtilis (strain 168)Location: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Rhodamine 6G [class: Xanthene], Acridine Orange [class: Acridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)]Description: Energy-dependent efflux pump responsible for decreased drug accumulation in multi-drug-resistant cells. Probably uses a transmembrane proton gradient as the energy source. Causes the efflux of a variety of toxic substances, including such structurally diverse compounds as ethidium bromide, rhodamine and acridine dyes, tetraphenylphosphonium, puromycin, chloramphenicol, doxorubicin, and fluoroquinolone antibiotics.
Length (amino acid): 400
Reference: Ahmed et al. 1995; Pubmed- 7608059
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Similar resistance genes in 'BacMet Predicted database' |
bltD | BacMet ID: BAC0051Code for: Enzyme
Family: Contains 1 N-acetyltransferase domainSequence: FASTA
Cross-database IDs: Link
Organism: Bacillus subtilis (strain 168)Location: Chromosome
Compound: Spermidine [class: Polyamines], Spermine [class: Polyamines]Description: Spermine/spermidine acetyltransferase bltD; Acetylates both spermidine and spermine at primary propyl amine moieties, with spermine being the preferred substrate.
Length (amino acid): 152
Reference: Ahmed et al. 1995; Pubmed- 7608059
|
Similar resistance genes in 'BacMet Predicted database' |
bltR | BacMet ID: BAC0052Code for: Regulator
Family: Contains 1 HTH merR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Bacillus subtilis (strain 168)Location: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Rhodamine 6G [class: Xanthene], Acridine Orange [class: Acridine]Description: Multidrug-efflux transporter 2 regulator; Activates transcription of the blt gene in response to structurally dissimilar drugs.
Length (amino acid): 273
Reference: Ahmed et al. 1995; Pubmed- 7608059
|
Similar resistance genes in 'BacMet Predicted database' |
bmr | BacMet ID: BAC0053Code for: Efflux
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Bacillus subtilis (strain 168)Location: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Rhodamine 6G [class: Xanthene], Acridine Orange [class: Acridine], Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)]Description: Energy-dependent efflux pump responsible for decreased drug accumulation in multi-drug-resistant cells. Probably uses a transmembrane proton gradient as the energy source. Causes the efflux of a variety of toxic substances, including such structurally diverse compounds as ethidium bromide, rhodamine and acridine dyes, tetraphenylphosphonium, puromycin, chloramphenicol, doxorubicin, and fluoroquinolone antibiotics.
Length (amino acid): 389
Reference: Neyfakh et al. 1991; Pubmed- 1675788
|
Similar resistance genes in 'BacMet Predicted database' |
bmrR | BacMet ID: BAC0054Code for: Regulator
Family: Contains 1 HTH merR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Bacillus subtilis (strain 168)Location: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Rhodamine 6G [class: Xanthene], Acridine Orange [class: Acridine]Description: Multidrug-efflux transporter 1 regulator; Activates transcription of the bmr gene in response to structurally dissimilar drugs. Binds rhodamine as an inducer.
Length (amino acid): 278
Reference: Ahmed et al. 1994; Pubmed- 7961792
|
Similar resistance genes in 'BacMet Predicted database' |
cadA/yvgW | BacMet ID: BAC0055Code for: Enzyme
Family: Cation transport ATPase (P-type) familySequence: FASTA
Cross-database IDs: Link
Organism: Helicobacter pylori (strain ATCC 700392/26695)(Campylobacter pylori)Location: Plasmids pI258 (S. aureus), Chromosome
Compound: Cadmium (Cd), Zinc (Zn)Description: Cadmium efflux ATPase, has two domains (phosphatase, aspartyl kinase); Cadmium, zinc and cobalt-transporting ATPase; Couples the hydrolysis of ATP with the transport of cadmium, zinc and cobalt out of the cell
Length (amino acid): 686
Reference: Herrman et al. 1999; Pubmed- 10417643, Nucifera et al. 1989; Pubmed- 2524829, Lee et al. 2001; Pubmed- 11282588
|
Similar resistance genes in 'BacMet Predicted database' |
cadC | BacMet ID: BAC0056Code for: Regulator
Family: Contains 1 HTH arsR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Staphylococcus aureusLocation: Plasmid pI258 (Staphylococcus aureus)
Compound: Cadmium (Cd), Bismuth (Bi), Zinc (Zn), Lead (Pb)Description: Found in cad operon; bind to cad operator/promoter, its a repressor protein in the operon; Metal-binding repressor for the cad operon. Involved in resistance to heavy metals, such as cadmium, bismuth, zinc or lead. Binds 2 metal ions per subunit. Metal binding to the N-terminal regulatory site causes the repressor to dissociate from the DNA
Length (amino acid): 122
Reference: Endo et al. 1995; Pubmed- 7543476
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Similar resistance genes in 'BacMet Predicted database' |
cadD | BacMet ID: BAC0057Code for: Enzyme
Family: CadD familySequence: FASTA
Cross-database IDs: Link
Organism: Staphylococcus aureus (strain N315)Location: Plasmid pN315 (Staphylococcus aureus (strain N315)), Plasmid pLUH02 (Staphylococcus aureus (strain ECT-R 2) ), Chromosome
Compound: Cadmium (Cd), Zinc (Zn)Description: Cadmium resistance permease; These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion Export.
Length (amino acid): 205
Reference: Crupper et al. 1999; Pubmed- 10383976, Kuroda et al. 2001; Pubmed- 11418146
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Similar resistance genes in 'BacMet Predicted database' |
cadR | BacMet ID: BAC0058Code for: Regulator
Family: MerR familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putida (Arthrobacter siderocapsulatus)Location: Plasmid pECd1 (uncultured bacterium), Chromosome
Compound: Cadmium (Cd)Description: Transcriptional regulator CadR; Responsible for cadmium resistance
Length (amino acid): 147
Reference: Lee et al. 2001; Pubmed- 11282588
|
Similar resistance genes in 'BacMet Predicted database' |
cadX | BacMet ID: BAC0059Code for: Regulator
Family: Contains 1 HTH arsR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Streptococcus salivariusLocation: Plasmid pLUG10 (Staphylococcus lugdunensis)
Compound: Cadmium (Cd), Zinc (Zn)Description: Cadmium resistance regulatory protein CadX
Length (amino acid): 112
Reference: Chen et al. 2008; Pubmed- 18165364
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Similar resistance genes in 'BacMet Predicted database' |
cdeA | BacMet ID: BAC0060Code for: Efflux
Family: MATE familySequence: FASTA
Cross-database IDs: Link
Organism: Clostridium difficileLocation: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine]Description: A multidrug efflux transporter of the MATE family, CdeA
Length (amino acid): 441
Reference: Dridi et al. 2004; Pubmed- 15383161
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Similar resistance genes in 'BacMet Predicted database' |
cepA | BacMet ID: BAC0061Code for: Efflux
Family: Cation diffusion facilitator (CDF) transporter family (FieF subfamily)Sequence: FASTA
Cross-database IDs: Link
Organism: Klebsiella pneumoniaeLocation: Chromosome
Compound: Chlorhexidine [class: Biguanides]Description: Cation-efflux pump cepA, Cation-efflux transporter that may have a role in detoxification by similarity. Associated with chlorhexidine resistance.
Length (amino acid): 300
Reference: Fang et al. 2002; Pubmed- 12019132
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Similar resistance genes in 'BacMet Predicted database' |
ceuE | BacMet ID: BAC0062Code for: Membrane Transporter
Family: ABC superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Psudomonas aeruginosaLocation: Plasmid pUM505 (pseudomonas aeruginosa), Plasmid pB4 (uncultured bacterium), Plasmid pMOL28 (Ralstonia metallidurans (strain CH34/ATCC 43123/DSM2839))
Compound: Chromium (Cr)Description: Periplasmic iron-binding protein Iron(III) ABC transporter CeuE; Encodes for membrane proteins; This protein reduces chromate (CrO4) accumulation and is essential for chromate resistance.
Length (amino acid): 313
Reference: Cervantes et al. 1990; Pubmed- 2152903, Branco et al. 2008; Pubmed- 18776016
|
Similar resistance genes in 'BacMet Predicted database' |
chrA | BacMet ID: BAC0063Code for: Efflux
Family: Chromate ion transporter (CHR) familySequence: FASTA
Cross-database IDs: Link
Organism: Psudomonas aeruginosaLocation: Plasmid pUM505 (pseudomonas aeruginosa)
Compound: Chromium (Cr)Description: Chromate (CrO4) transport protein ChrA; Responsible for the inducibility of the resistance
Length (amino acid): 416
Reference: Cervantes et al. 1990; Pubmed- 2152903
|
Similar resistance genes in 'BacMet Predicted database' |
chrA | BacMet ID: BAC0026Code for: Efflux
Family: Chromate Ion Transporter (CHR) familySequence: FASTA
Cross-database IDs: Link
Organism: Ochrobactrum triticiLocation: Chromosome (transposon TnOtChr)
Compound: Chromium (Cr)Description: Part of chrBACF operon from the transposable element TnOtChr. It pumps chromate out of the cell.
Length (amino acid): 458
Reference: Branco et al. 2008; Pubmed- 18776016
|
Similar resistance genes in 'BacMet Predicted database' |
chrA1 | BacMet ID: BAC0548Code for: Efflux
Family: Chromate ion transporter (CHR) familySequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM2839)Location: Plasmid pMOL28 (Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)), Plasmid pB4 (uncultured bacterium)
Compound: Chromium (Cr)Description: This protein reduces chromate accumulation and is essential for chromate resistance.
Length (amino acid): 401
Reference: Juhnke et al. 2002; Pubmed- 12471500, Branco et al. 2008; Pubmed- 18776016
|
Similar resistance genes in 'BacMet Predicted database' |
chrB | BacMet ID: BAC0027Code for: Regulator
Family: Contains 1 Chromate resistance exported protein domainSequence: FASTA
Cross-database IDs: Link
Organism: Ochrobactrum triticiLocation: Chromosome (transposon TnOtChr)
Compound: Chromium (Cr), Methyl Viologen [class: Paraquat], Menadione [class: Naphthoquinone]Description: Part of chrBACF operon from the transposable element TnOtChr. Has a regulatory role for expression of the ChrA transporter.
Length (amino acid): 312
Reference: Branco et al. 2013; Pubmed- 24223748, Branco et al. 2008; Pubmed- 18776016
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Similar resistance genes in 'BacMet Predicted database' |
chrB1 | BacMet ID: BAC0064Code for: Regulator
Family: Chromate ion transporter (CHR) familySequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM2839)Location: Plasmid pMOL28 (Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)), Plasmid pB4 (uncultured bacterium)
Compound: Chromium (Cr)Description: Together with ChrA, this protein reduces chromate accumulation and is essential for chromate (CrO4) resistance, possibly as a regulatory protein.
Length (amino acid): 324
Reference: Juhnke et al. 2002; Pubmed- 12471500, Branco et al. 2008; Pubmed- 18776016
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Similar resistance genes in 'BacMet Predicted database' |
chrC | BacMet ID: BAC0547Code for: Enzyme
Family: Iron/manganese superoxide dismutase familySequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM2839)Location: Plasmid pMOL28 (Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)), Plasmid pB4 (uncultured bacterium)
Compound: Chromium (Cr)Description: Fe-dependent Superoxide dismutase. This protein is not essential for chromate resistance, however it may contribute to resistance under certain environmental conditions. Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
Length (amino acid): 197
Reference: Juhnke et al. 2002; Pubmed- 12471500
|
Similar resistance genes in 'BacMet Predicted database' |
chrC | BacMet ID: BAC0028Code for: Enzyme
Family: Iron/manganese superoxide dismutase familySequence: FASTA
Cross-database IDs: Link
Organism: Ochrobactrum triticiLocation: Chromosome (transposon TnOtChr)
Compound: Chromium (Cr), Methyl Viologen [class: Paraquat], Menadione [class: Naphthoquinone]Description: Part of chrBACF operon from the transposable element TnOtChr. ChrC encodes a superoxide dismutase.
Length (amino acid): 202
Reference: Branco et al. 2008; Pubmed- 18776016
|
Similar resistance genes in 'BacMet Predicted database' |
chrE | BacMet ID: BAC0065Code for: Enzyme
Family: Rhodanese familySequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM2839)Location: Plasmid pMOL28 (Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)), Plasmid pB4 (uncultured bacterium)
Compound: Chromium (Cr)Description: ChrE, involved in the processing of chromium-glutathione-complexes
Length (amino acid): 113
Reference: Juhnke et al. 2002; Pubmed- 12471500, Branco et al. 2008; Pubmed- 18776016
|
Similar resistance genes in 'BacMet Predicted database' |
chrF | BacMet ID: BAC0066Code for: Regulator
Family: Chrome_Resist familySequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM2839)Location: Plasmid pMOL28 (Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)), Plasmid pB4 (uncultured bacterium)
Compound: Chromium (Cr)Description: ChrF, regulatory protein, involved in Chromate (CrO4) resistance
Length (amino acid): 140
Reference: Juhnke et al. 2002; Pubmed- 12471500
|
Similar resistance genes in 'BacMet Predicted database' |
chrF | BacMet ID: BAC0029Code for: Unknown
Family: Contains 1 Chromate resistance exported protein domainSequence: FASTA
Cross-database IDs: Link
Organism: Ochrobactrum triticiLocation: Chromosome (transposon TnOtChr)
Compound: Chromium (Cr), Methyl Viologen [class: Paraquat], Menadione [class: Naphthoquinone]Description: Part of chrBACF operon from the transposable element TnOtChr.
Length (amino acid): 150
Reference: Branco et al. 2008; Pubmed- 18776016
|
Similar resistance genes in 'BacMet Predicted database' |
chrI | BacMet ID: BAC0361Code for: Regulator
Family: UnknownSequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM2839)Location: Plasmid pMOL28 (Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)), Plasmid pB4 (uncultured bacterium)
Compound: Chromium (Cr)Description: ChrI, regulatory protein, involved in Chromate resistance.
Length (amino acid): 164
Reference: Juhnke et al. 2002; Pubmed- 12471500
|
Similar resistance genes in 'BacMet Predicted database' |
chrR | BacMet ID: BAC0538Code for: Enzyme
Family: NADH_dh2 familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putidaLocation: Chromosome
Compound: Chromium (Cr), Iron (Fe), Hydrogen Peroxide (H2O2) [class: Peroxides], 2,6-dichloroindophenol [class: Phenolic Compounds]Description: A soluble quinone reductase of Pseudomonas putida that defends against H2O2. ChrR is a dimeric flavin mononucleotide-binding flavoprotein that is able to catalyze a full reduction of Cr(VI) to Cr(III). ChrR may also contribute to the survival of P. putida in the environment by preventing redox cycling of soluble quinones. Confers resistance to Pottasium Ferricyanide (Fe++ salt) as well.
Length (amino acid): 186
Reference: Gonzalez et al. 2005; Pubmed- 15840577, Ackerley et al. 2004; Pubmed- 14766567, Park et al. 2000; Pubmed- 10788340
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Similar resistance genes in 'BacMet Predicted database' |
chrR | BacMet ID: BAC0539Code for: Enzyme
Family: NADH_dh2 familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas sp. (strain G-1)Location: Chromosome
Compound: Chromium (Cr)Description: Cr(VI) reductase. Absent in P. putida.
Length (amino acid): 243
Reference: Suzuki et al. Pubmed- 1992; Pubmed- 1322884
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Similar resistance genes in 'BacMet Predicted database' |
cinA | BacMet ID: BAC0067Code for: unknown
Family: Azurin-plastocyanin familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosa PAO1Location: Chromosome
Compound: Copper (Cu)Description: Copper-containing azurin-like protein cinA; CinA is similar to the P. fluorescens DF57 Cot protein which is involved in copper tolerance; cinA Influences the ability of Pseudomonas aeruginosa PAO1 to resist the bactericidal effect of copper
Length (amino acid): 205
Reference: Elquindi et al. 2009; Pubmed- 19239551, Quaranta et al. 2007; Pubmed- 17483220
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Similar resistance genes in 'BacMet Predicted database' |
cmeA | BacMet ID: BAC0068Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Campylobacter jejuniLocation: Chromosome
Compound: Copper (Cu), Cobalt (Co), Sodium Chenodeoxycholate [class: Acid], Sodium Deoxycholate [class: Acid], Sodium Cholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Ethidium Bromide [class: Phenanthridine]Description: RND efflux system, a periplasmic fusion protein CmeA. Part of the CmeABC multidrug efflux system in Campylobacter jejuni.
Length (amino acid): 367
Reference: Lin et al. 2002; Pubmed- 12069964
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Similar resistance genes in 'BacMet Predicted database' |
cmeB | BacMet ID: BAC0613Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Campylobacter jejuniLocation: Chromosome
Compound: Copper (Cu), Cobalt (Co), Sodium Chenodeoxycholate [class: Acid], Sodium Deoxycholate [class: Acid], Sodium Cholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Ethidium Bromide [class: Phenanthridine], Acridine orange [class: Acridine]Description: An inner membrane efflux transporter. Part of the CmeABC multidrug efflux system in Campylobacter jejuni.
Length (amino acid): 1040
Reference: Lin et al. 2002; Pubmed- 12069965, Pumbwe et al. 2004; Pubmed- 15201231
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Similar resistance genes in 'BacMet Predicted database' |
cmeC | BacMet ID: BAC0614Code for: Efflux
Family: RND superfamily, OMF familySequence: FASTA
Cross-database IDs: Link
Organism: Campylobacter jejuniLocation: Chromosome
Compound: Copper (Cu), Cobalt (Co), Sodium Chenodeoxycholate [class: Acid], Sodium Deoxycholate [class: Acid], Sodium Cholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Ethidium Bromide [class: Phenanthridine] Description: An outer membrane protein (CmeC). Part of the CmeABC multidrug efflux system in Campylobacter jejuni.
Length (amino acid): 492
Reference: Lin et al. 2002; Pubmed- 12069966
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Similar resistance genes in 'BacMet Predicted database' |
cmeD | BacMet ID: BAC0615Code for: Efflux
Family: RND superfamily, OMF familySequence: FASTA
Cross-database IDs: Link
Organism: Campylobacter jejuniLocation: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Triton X-100 [class: Polyethylene glycol], Tween 20 [class: Polyoxyethylene], Empigen [class: Amine betaine], Sodium Cholate [class: Acid], Sodium Glycocholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Chenodeoxycholate [class: Acid]Description: CmeD is the outer membrane protein.
Length (amino acid): 424
Reference: Akiba et al. 2006, Pubmed- 16303882
|
Similar resistance genes in 'BacMet Predicted database' |
cmeE | BacMet ID: BAC0616Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Campylobacter jejuniLocation: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Triton X-100 [class: Polyethylene glycol], Tween 20 [class: Polyoxyethylene], Empigen [class: Amine betaine], Sodium Cholate [class: Acid], Sodium Glycocholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Chenodeoxycholate [class: Acid]Description: CmeE is a periplasmic fusion protein
Length (amino acid): 246
Reference: Akiba et al. 2006, Pubmed- 16303882
|
Similar resistance genes in 'BacMet Predicted database' |
cmeF | BacMet ID: BAC0069Code for: Efflux
Family: RND superfamily; AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Campylobacter jejuniLocation: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Triton X-100 [class: Polyethylene glycol], Tween 20 [class: Polyoxyethylene], Empigen [class: Amine betaine], Sodium Cholate [class: Acid], Sodium Glycocholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Chenodeoxycholate [class: Acid]Description: Integral membrane component of efflux system (Multidrug efflux system CmeDEF)
Length (amino acid): 1005
Reference: Akiba et al. 2006, Pubmed- 16303882
|
Similar resistance genes in 'BacMet Predicted database' |
cmeR | BacMet ID: BAC0070Code for: Regulator
Family: TetR familySequence: FASTA
Cross-database IDs: Link
Organism: Campylobacter jejuni 81-176Location: Chromosome
Compound: Sodium Cholate [class: Acid]Description: Transcriptional repressor. CmeABC is controlled by CmeR, a transcriptional repressor encoded by a gene located immediately upstream of cmeABC. CmeR binds to the inverted repeat in the promoter region of cmeABC and inhibits the expression of the efflux operon.
Length (amino acid): 210
Reference: Lin et al. 2005; Pubmed- 15728904
|
Similar resistance genes in 'BacMet Predicted database' |
cmtR | BacMet ID: BAC0071Code for: Regulator
Family: Contains 1 HTH arsR-type DNA-binding domain.Sequence: FASTA
Cross-database IDs: Link
Organism: Mycobacterium tuberculosisLocation: Chromosome
Compound: Cobalt (Co), Nickel (Ni)Description: Metal-responsive transcriptional repressor for the cmt operon. Binding of cadmium or lead causes the repressor to dissociate from the DNA.
Length (amino acid): 118
Reference: Cavet et al. 2003; Pubmed- 12939264
|
Similar resistance genes in 'BacMet Predicted database' |
cnrA | BacMet ID: BAC0203Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839)Location: Plasmid pMOL28 (Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839))
Compound: Cobalt (Co), Nickel (Ni)Description: Nickel and cobalt resistance protein CnrA. The products of the genes cnrA, cnrB, and cnrC are likely to form a membrane-bound protein complex catalyzing an energy-dependent efflux of Ni2+ and Co2+. The mechanism of action of the CnrCBA complex may be that of a proton/cation antiporter.
Length (amino acid): 1076
Reference: Liesegang et al. 1993; Pubmed- 8380802, Grass et al. 2000; Pubmed- 10671463
|
Similar resistance genes in 'BacMet Predicted database' |
cnrA | BacMet ID: BAC0542Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Bradyrhizobium sp. STM 2465Location: Chromosome
Compound: Cobalt (Co), Nickel (Ni)Description: Fragment of nccA-like protein
Length (amino acid): 304
Reference: Chaintreuil et al. 2007; Pubmed- 17951443
|
Similar resistance genes in 'BacMet Predicted database' |
cnrA | BacMet ID: BAC0543Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Bradyrhizobium sp. STM 2464Location: Chromosome
Compound: Cobalt (Co), Nickel (Ni)Description: Fragment of nccA-like protein
Length (amino acid): 304
Reference: Chaintreuil et al. 2007; Pubmed- 17951443
|
Similar resistance genes in 'BacMet Predicted database' |
cnrA | BacMet ID: BAC0544Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Bradyrhizobium sp. STM 2457Location: Chromosome
Compound: Cobalt (Co), Nickel (Ni)Description: Fragment of nccA-like protein
Length (amino acid): 304
Reference: Chaintreuil et al. 2007; Pubmed- 17951443
|
Similar resistance genes in 'BacMet Predicted database' |
cnrA | BacMet ID: BAC0545Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Bradyrhizobium sp. STM 2460Location: Chromosome
Compound: Cobalt (Co), Nickel (Ni)Description: Fragment of nccA-like protein
Length (amino acid): 304
Reference: Chaintreuil et al. 2007; Pubmed- 17951443
|
Similar resistance genes in 'BacMet Predicted database' |
cnrA | BacMet ID: BAC0546Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Bradyrhizobium sp. STM 2458Location: Chromosome
Compound: Cobalt (Co), Nickel (Ni)Description: Fragment of nccA-like protein
Length (amino acid): 304
Reference: Chaintreuil et al. 2007; Pubmed- 17951443
|
Similar resistance genes in 'BacMet Predicted database' |
cnrB | BacMet ID: BAC0204Code for: Efflux
Family: Membrane Fusion Protein (MFP) familySequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839)Location: Plasmid pMOL28 (Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839))
Compound: Cobalt (Co), Nickel (Ni)Description: Nickel and cobalt resistance protein CnrB. The products of the genes cnrA, cnrB, and cnrC are likely to form a membrane-bound protein complex catalyzing an energy-dependent efflux of Ni2+ and Co2+. The mechanism of action of the CnrCBA complex may be that of a proton/cation antiporter.
Length (amino acid): 395
Reference: Liesegang et al. 1993; Pubmed- 8380802, Grass et al. 2000; Pubmed- 10671463
|
Similar resistance genes in 'BacMet Predicted database' |
cnrC | BacMet ID: BAC0072Code for: Efflux
Family: RND Superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839)Location: Plasmid pMOL28 (Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839))
Compound: Cobalt (Co), Nickel (Ni)Description: Nickel and cobalt resistance protein CnrC; The products of the genes cnrA, cnrB, and cnrC are likely to form a membrane-bound protein complex catalyzing an energy-dependent efflux of Ni2+ and Co2+. The mechanism of action of the CnrCBA complex may be that of a proton/cation antiporter.
Length (amino acid): 418
Reference: Liesegang et al. 1993; Pubmed- 8380802, Grass et al. 2000; Pubmed- 10671463
|
Similar resistance genes in 'BacMet Predicted database' |
cnrH | BacMet ID: BAC0073Code for: Regulator
Family: Sigma-70 factor familySequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839)Location: Plasmid pMOL28 (Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839))
Compound: Cobalt (Co), Nickel (Ni)Description: RNA polymerase sigma factor CnrH; CnrH alone is able to activate cnr Expression, and both CnrY and CrnX are needed for nickel induction of CnrH. In the absence of wild-type CnrY (due either to a frameshift or absence of the transcript, nickel and cobalt resistance is constitutive, indicating that CrnY may act as a repressor or an anti-sigma factor.
Length (amino acid): 191
Reference: Liesegang et al. 1993; Pubmed- 8380802, Grass et al. 2000; Pubmed- 10671463
|
Similar resistance genes in 'BacMet Predicted database' |
cnrR/cnrX | BacMet ID: BAC0291Code for: Regulator
Family: UnknownSequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839)Location: Plasmid pMOL28 (Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839))
Compound: Cobalt (Co), Nickel (Ni)Description: Nickel and cobalt resistance operon regulator CnrR. CnrH alone is able to activate cnr expression, while both CnrY and CnrR (CnrX) are needed for nickel induction of CnrH. Has been suggested to bind nickel.
Length (amino acid): 148
Reference: Liesegang et al. 1993; Pubmed- 8380802, Grass et al. 2000; Pubmed- 10671463, Tibazarwa et al. 2000; Pubmed- 10671464
|
Similar resistance genes in 'BacMet Predicted database' |
cnrT | BacMet ID: BAC0074Code for: Membrane Transporter
Family: EamA-like transporter familySequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839)Location: Plasmid pMOL28 (Cupriavidus metallidurans)
Compound: Cobalt (Co), Nickel (Ni)Description: CnrT, Cation Diffusion Facilitator, involved in Co(II), Ni(II) resistance
Length (amino acid): 351
Reference: Grass et al. 2000; Pubmed- 10671463
|
Similar resistance genes in 'BacMet Predicted database' |
cnrY | BacMet ID: BAC0075Code for: Regulator
Family: UnknownSequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839)Location: Plasmid pMOL28 (Cupriavidus metallidurans)
Compound: Cobalt (Co), Nickel (Ni)Description: Nickel and cobalt resistance protein CnrY; CnrY and CnrX are needed for nickel induction of CnrH. In the absence of wild-type CnrY (due either to a frameshift) or absence of the transcript, nickel and cobalt resistance is constitutive, indicating that CrnY may act as a repressor or an anti-sigma factor.
Length (amino acid): 95
Reference: Liesegang et al. 1993; Pubmed- 8380802, Grass et al. 2000; Pubmed- 10671463
|
Similar resistance genes in 'BacMet Predicted database' |
comR/ycfQ | BacMet ID: BAC0076Code for: Regulator
Family: TetR familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Copper (Cu)Description: Represses expression of BhsA/ComC by binding to its promoter region in the absence of copper.
Length (amino acid): 210
Reference: Deng et al. 2011; Pubmed- 21498759
|
Similar resistance genes in 'BacMet Predicted database' |
copA | BacMet ID: BAC0077Code for: Enzyme
Family: Multicopper oxidase (mco) familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas syringae pv. TomatoLocation: Plasmid pPT23D (Pseudomonas syringae pv. Tomato), Plasmid pRJ1004 (E. coli)
Compound: Copper (Cu), Silver (Ag)Description: Encode for copper uptake ATPases; also resistant to Ag+ ; periplasmic protein; Probably involved in copper and silver Export. Mediates copper resistance by sequestration of copper in the periplasm along with the copper-binding protein CopC. May have oxidase activity.
Length (amino acid): 609
Reference: Cha and Cooksey 1991; Pubmed- 1924351, Outten et al. 2001; Pubmed- 11399769
|
Similar resistance genes in 'BacMet Predicted database' |
copA | BacMet ID: BAC0078Code for: Enzyme
Family: Cation transport ATPase (P-type) familySequence: FASTA
Cross-database IDs: Link
Organism: Bacillus subtilis (strain 168)Location: Chromosome
Compound: Copper (Cu)Description: Involved in copper export; The copZA operon is activated by CueR and indirectly repressed by YfmP
Length (amino acid): 802
Reference: Banci et al. 2003; Pubmed- 14514665, Outten et al. 2001; Pubmed- 11399769
|
Similar resistance genes in 'BacMet Predicted database' |
copA | BacMet ID: BAC0619Code for: Enzyme
Family: Cation transport ATPase (P-type) family, Type IB subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putida PNL-MK25Location: Chromosome
Compound: Copper (Cu)Description: Part of copABCD operon, that encodes copper-binding and sequestering proteins for copper homeostasis in the copper-sensitive strain Pseudomonas putida PNL-MK25.
Length (amino acid): 564
Reference: Adaikkalam et al. 2005; Pubmed- 15920618
|
Similar resistance genes in 'BacMet Predicted database' |
copA | BacMet ID: BAC0620Code for: Enzyme
Family: Cation transport ATPase (P-type) family, Type IB subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258)Location: Chromosome
Compound: Copper (Cu)Description: Probably involved in copper import under copper limiting conditions.
Length (amino acid): 727
Reference: Odermatt et al. 1994; Pubmed- 8037745, Solioz et al. 1995; Pubmed- 7721839
|
Similar resistance genes in 'BacMet Predicted database' |
copA | BacMet ID: BAC0621Code for: Enzyme
Family: Cation transport ATPase (P-type) family, Type IB subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Xanthomonas citri subsp. CitriLocation: Chromosome
Compound: Copper (Cu)Description: Copper resistance protein A.
Length (amino acid): 623
Reference: Behlau et al. 2011; Pubmed- 21515725
|
Similar resistance genes in 'BacMet Predicted database' |
copA | BacMet ID: BAC0622Code for: Enzyme
Family: Cation transport ATPase (P-type) family, Type IB subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)Location: Chromosome
Compound: Copper (Cu), Silver (Ag)Description: Involved in copper and silver export.
Length (amino acid): 804
Reference: Mandal et al. 2002; Pubmed- 11756450
|
Similar resistance genes in 'BacMet Predicted database' |
copA | BacMet ID: BAC0623Code for: Enzyme
Family: Cation transport ATPase (P-type) family. Type IB subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Helicobacter pylori (Campylobacter pylori)Location: Chromosome
Compound: Copper (Cu)Description: Probably involved in copper export. Part of copAP operons of Helicobacter pylori and Helicobacter felis.
Length (amino acid): 741
Reference: Bayle et al. 1998; Pubmed- 9440521
|
Similar resistance genes in 'BacMet Predicted database' |
copA | BacMet ID: BAC0624Code for: Enzyme
Family: Cation transport ATPase (P-type) family. Type IB subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Helicobacter felis (strain ATCC 49179 / NCTC 12436 / CS1)Location: Chromosome
Compound: Copper (Cu)Description: Copper-transporting ATPase. part of copAP operon.
Length (amino acid): 732
Reference: Bayle et al. 1998; Pubmed- 9440521
|
Similar resistance genes in 'BacMet Predicted database' |
copA | BacMet ID: BAC0625Code for: Enzyme
Family: Cation transport ATPase (P-type) family. Type IB subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Xanthomonas alfalfae subsp. CitrumelonisLocation: Chromosome
Compound: Copper (Cu)Description: Copper resistance protein A. Required for the copper-inducible expression of copper resistance; part of the copper resistance determinant system.
Length (amino acid): 622
Reference: Bayle et al. 1998; Pubmed- 9440521
|
Similar resistance genes in 'BacMet Predicted database' |
copB | BacMet ID: BAC0626Code for: Enzyme
Family: Cation transport ATPase (P-type) family. Type IB subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas syringae pv. TomatoLocation: Plasmid pPT23D
Compound: Copper (Cu)Description: Copper resistance protein B. It mediates copper resistance by its sequestration in the outer membrane. Required for the copper-inducible expression of copper resistance; part of the copper resistance determinant system.
Length (amino acid): 328
Reference: Mellano et al. 1988; Pubmed- 3372485, Cha et al. 1991; Pubmed- 1924351
|
Similar resistance genes in 'BacMet Predicted database' |
copB | BacMet ID: BAC0627Code for: Enzyme
Family: Cation transport ATPase (P-type) family. Type IB subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Xanthomonas alfalfae subsp. CitrumelonisLocation: Chromosome
Compound: Copper (Cu)Description: Copper resistance protein B.
Length (amino acid): 422
Reference: Behlau et al. 2011; Pubmed- 21515725
|
Similar resistance genes in 'BacMet Predicted database' |
copB | BacMet ID: BAC0628Code for: Enzyme
Family: Cation transport ATPase (P-type) family. Type IB subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Xanthomonas citri subsp. CitriLocation: Chromosome
Compound: Copper (Cu)Description: Copper resistance protein B. Required for the copper-inducible expression of copper resistance; part of the copper resistance determinant system.
Length (amino acid): 422
Reference: Behlau et al. 2011; Pubmed- 21515725
|
Similar resistance genes in 'BacMet Predicted database' |
copB | BacMet ID: BAC0629Code for: Enzyme
Family: Cation transport ATPase (P-type) family. Type IB subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)Location: Chromosome
Compound: Copper (Cu)Description: It is a thermophilic Cu2+-ATPase in Archaeoglobus fulgidus. Required for the copper-inducible expression of copper resistance; part of the copper resistance determinant system.
Length (amino acid): 690
Reference: Mana-Capelli et al. 2003; Pubmed- 12876283,
|
Similar resistance genes in 'BacMet Predicted database' |
copB | BacMet ID: BAC0079Code for: Enzyme
Family: Cation transport ATPase (P-type) family. Type IB subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258)Location: Chromosome
Compound: Copper (Cu), Silver (Ag)Description: Efflux ATPases, located in same operone with copA; outer membrane protein, have 4 impefect repeats of octapeptide Asp-His-Ser-Gln/Lys-Met-Gln-Met; Required for the copper-inducible Expression of copper resistance. It is a pump for the extrusion of monovalent copper and silver ions, with copper probably being the natural substrate.
Length (amino acid): 745
Reference: Odermatt et al. 1994; Pubmed- 8037745, Solioz et al. 1995; Pubmed- 7721839
|
Similar resistance genes in 'BacMet Predicted database' |
copC | BacMet ID: BAC0630Code for: Binding protein
Family: CopC familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas syringae pv. TomatoLocation: Plasmid pPT23D
Compound: Copper (Cu)Description: Mediates copper resistance by sequestration of copper in the periplasm along with the copper-binding protein CopA. Required for the copper-inducible expression of copper resistance; part of the copper resistance determinant system.
Length (amino acid): 126
Reference: Cha et al. 1991; Pubmed- 1924351
|
Similar resistance genes in 'BacMet Predicted database' |
copC | BacMet ID: BAC0631Code for: Binding protein
Family: CopC familySequence: FASTA
Cross-database IDs: Link
Organism: Xanthomonas citri subsp. CitriLocation: Chromosome
Compound: Copper (Cu)Description: Copper resistance protein C.
Length (amino acid): 127
Reference: Behlau et al. 2011; Pubmed- 21515725
|
Similar resistance genes in 'BacMet Predicted database' |
copC | BacMet ID: BAC0639Code for: Binding protein
Family: CopC familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas fluorescensLocation: Chromosome
Compound: Copper (Cu)Description: Copper ion binding protein copC. Part of the copRSCD cluster required for full copper resistance and regulated at the transcription level by Cu in Pseudomonas fluorescens. Expression of copCD is regulated directly by the two-component response regulator CopR, which also regulates its own expression in Pseudomonas fluorescens.
Length (amino acid): 127
Reference: Hu et al. 2009; Pubmed- 19557345
|
Similar resistance genes in 'BacMet Predicted database' |
copD | BacMet ID: BAC0632Code for: Membrane Transporter
Family: CopD familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas syringae pv. TomatoLocation: Plasmid pPT23D
Compound: Copper (Cu)Description: Involved in copper resistance. Appears to be involved in copper uptake in conjunction with CopC. Required for the copper-inducible expression of copper resistance; part of the copper resistance determinant system.
Length (amino acid): 310
Reference: Mellano et al. 1988; Pubmed- 3372485, Bender et al. 1987; Pubmed- 3027030
|
Similar resistance genes in 'BacMet Predicted database' |
copD | BacMet ID: BAC0633Code for: Membrane Transporter
Family: CopD familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putida PNL-MK25Location: Chromosome
Compound: Copper (Cu)Description: Copper resistance protein D; Required for the copper-inducible expression of copper resistance; part of the copper resistance determinant system.
Length (amino acid): 291
Reference: Adaikkalam et al. 2005; Pubmed- 15920618
|
Similar resistance genes in 'BacMet Predicted database' |
copD | BacMet ID: BAC0640Code for: Membrane transpoter
Family: CopD familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas fluorescensLocation: Chromosome
Compound: Copper (Cu)Description: Part of the copRSCD cluster required for full copper resistance and regulated at the transcription level by Cu in Pseudomonas fluorescens. Expression of copCD is regulated directly by the two-component response regulator CopR, which also regulates its own expression in Pseudomonas fluorescens.
Length (amino acid): 312
Reference: Hu et al. 2009; Pubmed- 19557345
|
Similar resistance genes in 'BacMet Predicted database' |
copJ | BacMet ID: BAC0080Code for: Enzyme
Family: Cytochrome C familySequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839)Location: Plasmid pMOL30 (Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) ),
Compound: Copper (Cu)Description: CopJ cytochrome c protein involved in Cu(II)/Cu(I) resistance; Structural genes like copA and copB; periplasmic protein; Mediates copper resistance by sequestration of copper in the periplasm along with the copper-binding protein CopA
Length (amino acid): 174
Reference: Cha et al. 1991; Pubmed- 1924351
|
Similar resistance genes in 'BacMet Predicted database' |
copK | BacMet ID: BAC0081Code for: Binding protein
Family: CopK familySequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839)Location: Plasmid pMOL30 (Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) )
Compound: Copper (Cu)Description: Copper resistance protein K; Involved in resistance to copper. Can bind up to 2 copper ions. Has higher affinity for Cu+ than for Cu2+
Length (amino acid): 94
Reference: Bersch et al 2008; Pubmed- 18533181
|
Similar resistance genes in 'BacMet Predicted database' |
copL | BacMet ID: BAC0082Code for: Regulator
Family: UnknownSequence: FASTA
Cross-database IDs: Link
Organism: Xanthomonas perforansLocation: Chromosome
Compound: Copper (Cu)Description: Involved in resistance to copper. Can bind up to 2 copper ions. Has higher affinity for Cu+ than for Cu2+.
Length (amino acid): 122
Reference: Behlau et al. 2011; Pubmed- 21515725, Voloudakis et al. 2005; Pubmed- 15691931
|
Similar resistance genes in 'BacMet Predicted database' |
copP | BacMet ID: BAC0634Code for: Binding protein
Family: Contains Heavy-metal-associated (HMA) domainSequence: FASTA
Cross-database IDs: Link
Organism: Helicobacter felis (strain ATCC 49179 / NCTC 12436 / CS1)Location: Chromosome
Compound: Copper (Cu)Description: Copper ion-binding protein. Part of a cation-transporting system which is associated with copper export out of the cells.
Length (amino acid): 66
Reference: Bayle et al. 1998; Pubmed- 9440521
|
Similar resistance genes in 'BacMet Predicted database' |
copP | BacMet ID: BAC0635Code for: Binding protein
Family: Contains Heavy-metal-associated (HMA) domainSequence: FASTA
Cross-database IDs: Link
Organism: Helicobacter pylori (strain J99 / ATCC 700824) (Campylobacter pylori J99)Location: Chromosome
Compound: Copper (Cu)Description: Copper ion-binding protein. Part of a cation-transporting system which is associated with copper export out of the H. pylori cells.
Length (amino acid): 66
Reference: Bayle et al. 1998; Pubmed- 9440521
|
Similar resistance genes in 'BacMet Predicted database' |
copR | BacMet ID: BAC0083Code for: Regulator
Family: Contains 1 response regulatory domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas syringae pv. TomatoLocation: Plasmid pPT23D (Pseudomonas syringae pv. Tomato), Plasmid pPaCu1 (Pseudomonas syringae)
Compound: Copper (Cu)Description: Transcriptional activator protein CopR; Member of the two-component regulatory system CopS/CopR. Involved in the activation of copper resistance gene operon CopABCD. Phosphorylation of CopR by CopS would convert it into an active state to induce Expression of the cop operon by binding to a specific site on the cop operon promoter (cop box) and possibly by facilitating the binding of RNA polymerase to the cop promoter. CopR also binds to the chromosomally encoded cop operon promoter. May also be involved in basic copper metabolism.
Length (amino acid): 227
Reference: Mills et al. 1993; Pubmed- 8449873
|
Similar resistance genes in 'BacMet Predicted database' |
copR | BacMet ID: BAC0638Code for: Regulator
Family: Contains response regulatory domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas fluorescensLocation: Chromosome
Compound: Copper (Cu)Description: Member of the two-component regulatory system CopS/CopR. May also be involved in basic copper metabolism. Expression of copCD is regulated directly by the two-component response regulator CopR, which also regulates its own expression in Pseudomonas fluorescens.
Length (amino acid): 231
Reference: Hu et al. 2009; Pubmed- 19557345
|
Similar resistance genes in 'BacMet Predicted database' |
copS | BacMet ID: BAC0637Code for: Regulator
Family: Contains histidine kinase domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas fluorescensLocation: Chromosome
Compound: Copper (Cu)Description: Member of the two-component regulatory system CopS/CopR. May also be involved in basic copper metabolism.
Length (amino acid): 462
Reference: Hu et al. 2009; Pubmed- 19557345
|
Similar resistance genes in 'BacMet Predicted database' |
copS | BacMet ID: BAC0537Code for: Regulator
Family: Contains 1 histidine kinase domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas syringaeLocation: Plasmid pPT23D (Pseudomonas syringae pv. Tomato), Plasmid pPaCu1 (Pseudomonas syringae)
Compound: Copper (Cu)Description: Sensor protein CopS. Member of the two-component regulatory system CopS/CopR. Involved in the activation of copper resistance gene operon copABCD. Specifically recognizes or transduces a signal only in response to copper. This would lead to phosphorylation of CopR in the cytoplasm. CopS/CopR may also regulate chromosomally encoded genes. May also be involved in basic copper metabolism.
Length (amino acid): 487
Reference: Mills et al. 1993; Pubmed- 8449873
|
Similar resistance genes in 'BacMet Predicted database' |
copY/tcrY | BacMet ID: BAC0084Code for: Regulator
Family: BlaI transcriptional regulatory familySequence: FASTA
Cross-database IDs: Link
Organism: Enterococcus hiraeLocation: Chromosome
Compound: Copper (Cu)Description: CopA and CopB upstream repressor CopY, regulates the cop operon; Binds to DNA in complex with Zn2+, repressing the transcription of the CopYZAB operon. Exchange of the bound zinc by two copper ions delivered by CopZ Cu1+-bound form causes release of CopY from the promoter, leading to the transcription of the operon
Length (amino acid): 145
Reference: Strusak et al. 1997; Pubmed- 9083014, Wunderli-Ye et al. 1999; Pubmed- 10362527
|
Similar resistance genes in 'BacMet Predicted database' |
copZ | BacMet ID: BAC0085Code for: Chaperone
Family: HMA (Heavy metal Associated) familySequence: FASTA
Cross-database IDs: Link
Organism: Enterococcus hiraeLocation: Chromosome
Compound: Copper (Cu)Description: Copper chaperone CopZ; copA and copB anti-repressor, regulates the cop operon
Length (amino acid): 69
Reference: Cobine et al. 1999; Pubmed- 10069368
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Similar resistance genes in 'BacMet Predicted database' |
corA | BacMet ID: BAC0086Code for: Membrane Transporter
Family: CorA metal ion transporter (MIT) familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Magnesium (Mg), Cobalt (Co), Nickel (Ni), Manganese (Mn)Description: Mediates influx of magnesium ions. Can also mediate cobalt and manganese uptake, albeit only at extracellular concentrations that are toxic to the cell. Does not transport iron.
Length (amino acid): 316
Reference: Park et al. 1976; Pubmed- 780341
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Similar resistance genes in 'BacMet Predicted database' |
corA | BacMet ID: BAC0641Code for: Membrane Transporter
Family: CorA metal ion transporter (MIT) familySequence: FASTA
Cross-database IDs: Link
Organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)Location: Chromosome
Compound: Magnesium (Mg), Cobalt (Co), Nickel (Ni), Manganese (Mn)Description: Mediates both influx and efflux of magnesium ions. Can also mediate cobalt and nickel uptake, albeit only at extracellular concentrations that are toxic to the cell. Does not transport iron.
Length (amino acid): 316
Reference: Smith et al. 1998; Pubmed- 9786860, Gibson et al. 1991; Pubmed- 1779764, Hmiel et al. 1989; Pubmed- 2548998
|
Similar resistance genes in 'BacMet Predicted database' |
corB | BacMet ID: BAC0643Code for: Enzyme
Family: Cation transport ATPase (P-type) familySequence: FASTA
Cross-database IDs: Link
Organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)Location: Chromosome
Compound: Cobalt (Co), Magnesium (Mg)Description: Magnesium-transporting ATPase, P-type 1; Mediates magnesium influx to the cytosol.
Length (amino acid): 227
Reference: Gibson et al. 1991; Pubmed- 1779764, Hmiel et al. 1989; Pubmed- 2548998
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Similar resistance genes in 'BacMet Predicted database' |
corC | BacMet ID: BAC0088Code for: Efflux
Family: UPF0053 family. Contains 2 CBS domains.Sequence: FASTA
Cross-database IDs: Link
Organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)Location: Chromosome
Compound: Cobalt (Co), Magnesium (Mg)Description: Magnesium and cobalt efflux protein CorC; Plays a role in the transport of magnesium and cobalt ions
Length (amino acid): 292
Reference: Gibson et al. 1991; Pubmed- 1779764, Hmiel et al. 1989; Pubmed- 2548998
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Similar resistance genes in 'BacMet Predicted database' |
corD | BacMet ID: BAC0644Code for: Unknown
Family: Contains 1 apaG domainSequence: FASTA
Cross-database IDs: Link
Organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)Location: Chromosome
Compound: Cobalt (Co), Magnesium (Mg)Description: mutations in apaG/corD give a phenotype of low-level Co2+ resistance. They also decrease Mg2+ efflux but not influx via the CorA Mg2+ transport system.
Length (amino acid): 125
Reference: Gibson et al. 1991; Pubmed- 1779764, Hmiel et al. 1989; Pubmed- 2548998
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Similar resistance genes in 'BacMet Predicted database' |
corR | BacMet ID: BAC0089Code for: Regulator
Family: Contains 1 sigma-54 factor interaction domainSequence: FASTA
Cross-database IDs: Link
Organism: Myxococcus xanthus (strain DK 1622)Location: Chromosome
Compound: Copper (Cu)Description: Sigma-54 dependent DNA-binding response regulator CorR; corSR copper-responsive two component system that induces carotenoid production. It also regulates three multicopper oxidases: cuoA, cuoB, cuoC, and two P-type ATPases: copA and copB.
Length (amino acid): 466
Reference: Sanchez-Sutil et al. 2013; Pubmed- 23874560
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Similar resistance genes in 'BacMet Predicted database' |
corR/coaR | BacMet ID: BAC0090Code for: Regulator
Family: MerR familySequence: FASTA
Cross-database IDs: Link
Organism: Synechocystis sp. PCC 6803 substr. GT-ILocation: Chromosome
Compound: Cobalt (Co), Magnesium (Mg)Description: Cobalt-dependent transcriptional regulator, CorR
Length (amino acid): 370
Reference: Rutherford et al. 1999; Pubmed- 10464323, Garcia-Dominquez et al. 2000; Pubmed- 10692354
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Similar resistance genes in 'BacMet Predicted database' |
corS | BacMet ID: BAC0091Code for: Regulator
Family: Contains histidine kinase domainSequence: FASTA
Cross-database IDs: Link
Organism: Myxococcus xanthus (strain DK 1622)Location: Chromosome
Compound: Copper (Cu)Description: Sensor histidine kinase CorS; corSR copper-responsive two component system that induces carotenoid production. It also regulates three multicopper oxidases: cuoA, cuoB, cuoC, and two P-type ATPases: copA and copB.
Length (amino acid): 491
Reference: Sanchez-Sutil et al. 2013; Pubmed- 23874560
|
Similar resistance genes in 'BacMet Predicted database' |
corT/coaT | BacMet ID: BAC0092Code for: Enzyme
Family: Cation transport ATPase (P-type) familySequence: FASTA
Cross-database IDs: Link
Organism: Synechocystis sp. PCC 6803 substr. GT-ILocation: Chromosome
Compound: Cobalt (Co)Description: Cation-transporting ATPase E1-E2 ATPase, CorT
Length (amino acid): 642
Reference: Rutherford et al. 1999; Pubmed- 10464323, Garcia-Dominquez et al. 2000; Pubmed- 10692354
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Similar resistance genes in 'BacMet Predicted database' |
cpxA | BacMet ID: BAC0532Code for: Regulator
Family: Contains 1 histidine kinase domainSequence: FASTA
Cross-database IDs: Link
Organism: Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044Location: Chromosome
Compound: Hydrogen Peroxide (H2O2) [class: Peroxides], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides]Description: Sensor protein of stress-related two-component regulatory system of CpxAR. It has role in oxidative stress tolerance. It has a regulatory role on MDR efflux pumps. It can confer resistance to cefepime, cefotaxime, ceftazidime and chloramphenicol which possibly are the preferred substrates of the resistance determinants for e.g. efflux pumps perhaps regulated by the Cpx regulon.
Length (amino acid): 457
Reference: Srinivasan et al. 2012; Pubmed- 22496764
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Similar resistance genes in 'BacMet Predicted database' |
cpxR | BacMet ID: BAC0533Code for: Regulator
Family: Contains 1 response regulator domainSequence: FASTA
Cross-database IDs: Link
Organism: Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044Location: Chromosome
Compound: Hydrogen Peroxide (H2O2) [class: Peroxides], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides]Description: Response regulator of stress-related two-component regulatory system. It has role in oxidative stress tolerance. It has a regulatory role on MDR efflux pumps. It can confer resistance to cefepime, cefotaxime, ceftazidime and chloramphenicol which possibly are the preferred substrates of the resistance determinants for e.g. efflux pumps perhaps regulated by the Cpx regulon.
Length (amino acid): 232
Reference: Srinivasan et al. 2012; Pubmed- 22496764
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Similar resistance genes in 'BacMet Predicted database' |
crdA | BacMet ID: BAC0093Code for: Efflux
Family: Contains a YtkA domainSequence: FASTA
Cross-database IDs: Link
Organism: Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)Location: Chromosome
Compound: Copper (Cu)Description: Copper resistance determinant, CrdA. It is required for adaptation to copper-rich environmental conditions.
Length (amino acid): 125
Reference: Waidner et al. 2002; Pubmed- 12426358
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Similar resistance genes in 'BacMet Predicted database' |
crdB | BacMet ID: BAC0094Code for: Efflux
Family: RND superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)Location: Chromosome
Compound: Copper (Cu)Description: Putative copper resistance determinant, CrdC. It is required for adaptation to copper-rich environmental conditions.
Length (amino acid): 412
Reference: Waidner et al. 2002; Pubmed- 12426358
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Similar resistance genes in 'BacMet Predicted database' |
crdR | BacMet ID: BAC0095Code for: Regulator
Family: Contains 1 Response_reg domain, 1 Trans_reg_C domainSequence: FASTA
Cross-database IDs: Link
Organism: Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)Location: Chromosome
Compound: Copper (Cu)Description: Response regulator; part of two-component regulatory system crdR/crdS
Length (amino acid): 213
Reference: Waidner et al. 2005; Pubmed- 15968080
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Similar resistance genes in 'BacMet Predicted database' |
crdS | BacMet ID: BAC0096Code for: Regulator
Family: Contains 1 histidine kinase domainSequence: FASTA
Cross-database IDs: Link
Organism: Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)Location: Chromosome
Compound: Copper (Cu)Description: Histidine kinase sensor protein; part of two-component regulatory system crdR/crdS
Length (amino acid): 397
Reference: Waidner et al. 2005; Pubmed- 15968080
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Similar resistance genes in 'BacMet Predicted database' |
csoR | BacMet ID: BAC0558Code for: Regulator
Family: CsoR familySequence: FASTA
Cross-database IDs: Link
Organism: Bacillus subtilis 168Location: Chromosome
Compound: Copper (Cu)Description: Copper-sensing transcriptional repressor CsoR. Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the presence of copper ions, CsoR binds Cu1+, which significantly decreases its DNA binding affinity and leads to the transcription of the genes. Cells lacking this gene display a slightly enhanced ability to grow into medium containing high levels of copper.
Length (amino acid): 101
Reference: Chillappagari et al. 2009; Pubmed- 19168619
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Similar resistance genes in 'BacMet Predicted database' |
ctpC | BacMet ID: BAC0098Code for: Enzyme
Family: Cation transport ATPase (P-type)family. Type IB subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Mycobacterium tuberculosisLocation: Chromosome
Compound: Manganese (Mn), Zinc (Zn)Description: Probable manganese/zinc-exporting P-type ATPase
Length (amino acid): 718
Reference: Padilla-Benavides et al. 2013; Pubmed- 23482562
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Similar resistance genes in 'BacMet Predicted database' |
ctpD | BacMet ID: BAC0099Code for: Enzyme
Family: Cation transport ATPase (P-type)family. Type IB subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Mycobacterium smegmatisLocation: Chromosome
Compound: Cobalt (Co), Nickel (Ni)Description: Probable cobalt/nickel-exporting P-type ATPase; Involved in heavy metal homeostasis. Probably exports nickel and cobalt ions out of the cell.
Length (amino acid): 657
Reference: Raimunda et al. 2012; Pubmed- 22591178
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Similar resistance genes in 'BacMet Predicted database' |
ctpG | BacMet ID: BAC0100Code for: Enzyme
Family: Cation transport ATPase (P-type)Sequence: FASTA
Cross-database IDs: Link
Organism: Mycobacterium tuberculosisLocation: Chromosome
Compound: Copper (Cu)Description: Cation-transporting ATPase G; Response to copper ion
Length (amino acid): 771
Reference: Liu et al. 2007; Pubmed- 17143269, Sakamoto et al. 2010; Pubmed- 20395270
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Similar resistance genes in 'BacMet Predicted database' |
ctpV | BacMet ID: BAC0101Code for: Enzyme
Family: Cation transport ATPase (P-type)Sequence: FASTA
Cross-database IDs: Link
Organism: Mycobacterium tuberculosisLocation: Chromosome
Compound: Copper (Cu)Description: Copper-exporting P-type ATPase V; Necessary for copper homeostasis and likely functions as a copper exporter. Also required for full virulence.
Length (amino acid): 770
Reference: Ward et al. 2010; Pubmed- 20624225
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Similar resistance genes in 'BacMet Predicted database' |
cueA | BacMet ID: BAC0102Code for: Enzyme
Family: Cation transport ATPase (P-type)Sequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putida (Arthrobacter siderocapsulatus)Location: Chromosome
Compound: Copper (Cu), Silver (Ag)Description: Copper transporter CueA; Periplasmic protein
Length (amino acid): 797
Reference: Adaikkalam et al. 2002; Pubmed- 12213931
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Similar resistance genes in 'BacMet Predicted database' |
cueO | BacMet ID: BAC0103Code for: Enzyme
Family: Multicopper oxidase (mco)Sequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Copper (Cu)Description: Copper efflux oxidase (blue copper oxidase); Involved in periplasmic detoxification of copper by oxidizing Cu+ to Cu2+ and thus preventing its uptake into the cytoplasm. Possesses phenoloxidase and ferroxidase activities and might be involved in the production of polyphenolic compounds and the prevention of oxidative damage in the periplasm.
Length (amino acid): 516
Reference: Grass et al. 2001; Pubmed- 11222619, Outten et al. 2001; Pubmed- 11399769
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Similar resistance genes in 'BacMet Predicted database' |
cueP | BacMet ID: BAC0104Code for: Binding protein
Family: unknownSequence: FASTA
Cross-database IDs: Link
Organism: Salmonella enterica serovar TyphimuriumLocation: Chromosome
Compound: Copper (Cu)Description: Periplasmic copper-binding protein and has been implicated in the transfer of copper ions to SodCII in the periplasm; evolved to survive in the phagosomes of macrophages in Salmonella enterica serovar Typhimurium; CueP can functionally replace the Cus complex for periplasmic copper resistance, in particular under anaerobic conditions; CueP does not confer silver or gold resistance to Salmonella
Length (amino acid): 179
Reference: Pontel et al. 2009; Pubmed- 19538445, Osman et al. 2010; Pubmed- 20534583
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Similar resistance genes in 'BacMet Predicted database' |
cueR/ybbI | BacMet ID: BAC0105Code for: Regulator
Family: MerR familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Copper (Cu)Description: Regulates the transcription of the copA and cueO genes. It detects cytoplasmic copper stress and activates transcription in response to increasing copper concentrations. CueR is a direct regulator of copZA transcription that mediates copper induction
Length (amino acid): 135
Reference: Stoyanov et al. 2001; Pubmed- 11136469, Gaballa et al. 2003; Pubmed- 14663075
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Similar resistance genes in 'BacMet Predicted database' |
cuiD | BacMet ID: BAC0106Code for: Enzyme
Family: Multicopper oxidase (MCO) familySequence: FASTA
Cross-database IDs: Link
Organism: Salmonella enterica serovar TyphimuriumLocation: Chromosome
Compound: Copper (Cu), Hydrogen Peroxide (H2O2) [class: Peroxides]Description: A multi-copper oxidase gene code for Cu-inducible periplasmic protein; CuiD is required for both copper homeostasis and the copper resistance response in the presence and in the absence of oxygen; Probably involved in periplasmic detoxification of copper by oxidizing Cu+ to Cu2+ and thus preventing its uptake into the cytoplasm; cuiD may be involved in oxidative stress response
Length (amino acid): 536
Reference: Lim et al 2002; Pubmed- 12442888
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Similar resistance genes in 'BacMet Predicted database' |
cusA/ybdE | BacMet ID: BAC0107Code for: Efflux
Family: RND superfamily; AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Plasmid megaplasmid CH34 (Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)),
Compound: Copper (Cu), Silver (Ag)Description: Part of a cation efflux system (CusA, CusB, CusC and CusF) that mediates resistance to copper and silver; located in cell inner membrane; Belongs to the AcrB/AcrD/AcrF family
Length (amino acid): 1047
Reference: Franke et al. 2003; Pubmed- 12813074
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Similar resistance genes in 'BacMet Predicted database' |
cusB | BacMet ID: BAC0108Code for: Efflux
Family: Membrane fusion protein(MFP) familySequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)Location: Plasmid megaplasmid CH34 (Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)),
Compound: Copper (Cu), Silver (Ag)Description: Part of a cation efflux system (CusA, CusB, CusC and CusF) that mediates resistance to copper and silver; Belongs to the membrane fusion protein (MFP) family
Length (amino acid): 407
Reference: Franke et al. 2003; Pubmed- 12813074
|
Similar resistance genes in 'BacMet Predicted database' |
cusC/ylcB | BacMet ID: BAC0109Code for: Efflux
Family: RND Superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Plasmid megaplasmid CH34 (Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839))
Compound: Copper (Cu), Silver (Ag)Description: Part of a cation efflux system (CusA, CusB, CusC and CusF) that mediates resistance to copper and silver
Length (amino acid): 457
Reference: Franke et al. 2003; Pubmed- 12813074
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Similar resistance genes in 'BacMet Predicted database' |
cusF/cusX | BacMet ID: BAC0110Code for: Efflux
Family: Contains 1 CusF_Ec domainSequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Plasmid pkPN3 (Klebsiella pneumoniae subsp. pneumoniae MGH 78578), Plasmid pAPEC-O2-R
Compound: Copper (Cu), Silver (Ag)Description: Cation efflux system periplasmic protein CusF; Part of a cation efflux system (CusA, CusB, CusC and CusF) that mediates resistance to copper and silver. Binds one copper per polypeptide ; located in Periplasm
Length (amino acid): 110
Reference: Franke et al. 2003; Pubmed- 12813074
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Similar resistance genes in 'BacMet Predicted database' |
cusR/ylcA | BacMet ID: BAC0111Code for: Regulator
Family: Contains 1 response regulatory domainSequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Plasmid pECL_A (Enterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCDC 279-56))
Compound: Copper (Cu), Silver (Ag)Description: Member of the two-component regulatory system CusS/CusR. Activates the Expression of cusCFBA and plasmid pRJ1004 gene pcoE in response to increasing levels of copper ions, and probably silver ions. Can also increase the basal-level Expression of copper resistance gene operon pcoABCD; located in cytoplasm
Length (amino acid): 227
Reference: Munson et al. 2000; Pubmed- 11004187
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Similar resistance genes in 'BacMet Predicted database' |
cusS | BacMet ID: BAC0112Code for: Regulator
Family: Contains 1 HAMP domain and 1 histidine kinase domainSequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Copper (Cu), Silver (Ag)Description: Sensor kinase CusS; Member of the two-component regulatory system CusS/CusR. Copper ion sensor. Could also be a silver ion sensor. Activates CusR by phosphorylation; located in inner cell membrane
Length (amino acid): 480
Reference: Munson et al. 2000; Pubmed- 11004187
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Similar resistance genes in 'BacMet Predicted database' |
cutA | BacMet ID: BAC0113Code for: Binding protein
Family: CutA familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Copper (Cu)Description: Divalent-cation tolerance protein CutA; Involved in resistance toward heavy metals
Length (amino acid): 112
Reference: Fong et al. 1995; Pubmed- 7623666
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Similar resistance genes in 'BacMet Predicted database' |
cutC | BacMet ID: BAC0114Code for: Binding protein
Family: CutC familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Copper (Cu)Description: Copper homeostasis protein CutC; Involved in copper homeostasis; Located in cytoplasm
Length (amino acid): 248
Reference: Gupta et al. 1995; Pubmed- 7635807
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Similar resistance genes in 'BacMet Predicted database' |
cutE/lnt | BacMet ID: BAC0115Code for: Enzyme
Family: CN hydrolase (Apolipoprotein N-acyltransferase subfamily)Sequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Copper (Cu)Description: Apolipoprotein N-acyltransferas, it attaches a fatty acid to apo-nlpE (cutF)
Length (amino acid): 512
Reference: Rogers et al. 1991; Pubmed- 1938881
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Similar resistance genes in 'BacMet Predicted database' |
cutF/nlpE | BacMet ID: BAC0116Code for: Outer membrane lipoprotein
Family: Contains 1 NlpE domainSequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Copper (Cu)Description: Copper homeostasis protein CutF, encodes for outer membrane lipoprotein might affect on copper permeability; Involved in copper homeostasis. Could be involved in both copper efflux and the delivery of copper to copper-dependent enzymes. When overproduced induces degP through the activation of the two-component system CpxA/CpxR
Length (amino acid): 236
Reference: Gupta et al. 1995; Pubmed- 7635807
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Similar resistance genes in 'BacMet Predicted database' |
cutO | BacMet ID: BAC0117Code for: Enzyme
Family: Multocopper oxidase (mco) familySequence: FASTA
Cross-database IDs: Link
Organism: Rhodobacter capsulatusLocation: Chromosome
Compound: Copper (Cu)Description: Multi copper oxidase CutO; Involved in copper resistance; CutO confers copper tolerance not only under aerobic conditions, as described for the well-characterized E. coli multicopper oxidase CueO, but also under anaerobic conditions.
Length (amino acid): 491
Reference: Wiethaus et al. 2006; Pubmed- 16487321
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Similar resistance genes in 'BacMet Predicted database' |
cutR | BacMet ID: BAC0118Code for: Regulator
Family: Contains 1 response regulatory domain.Sequence: FASTA
Cross-database IDs: Link
Organism: Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)Location: Chromosome
Compound: Copper (Cu)Description: CutR acts as a repressor of cutO Expression under low copper concentrations; Member of the two-component regulatory system CutS/CutR, involved in the regulation of copper metabolism.
Length (amino acid): 118
Reference: Wiethaus et al. 2006; Pubmed- 16487321
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Similar resistance genes in 'BacMet Predicted database' |
czcA | BacMet ID: BAC0119Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839)Location: Plasmid pMOL30 (Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) ),
Compound: Cadmium (Cd), Zinc (Zn), Cobalt (Co)Description: Cobalt-zinc-cadmium resistance protein; the basic inner membrane transport protein; Has a low cation transport activity for cobalt, it is essential for the expression of cobalt, zinc, and cadmium resistance. CzcA and CzcB together would act in zinc efflux nearly as effectively as the complete CZC efflux system (CzcABC).
Length (amino acid): 1063
Reference: Nies et al. 1989; Pubmed- 2678100
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Similar resistance genes in 'BacMet Predicted database' |
czcB | BacMet ID: BAC0120Code for: Efflux
Family: Membrane fusion protein (MFP) familySequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839)Location: Plasmid pMOL30 (Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) ),
Compound: Cadmium (Cd), Zinc (Zn), Cobalt (Co)Description: Cobalt-zinc-cadmium resistance protein CzcB; Membrane fusion protein bridges inner and outer cell membranes (in periplasm); CzcA and CzcB together would act in zinc efflux nearly as effectively as the complete czc efflux system (CzcABC). The CzcB protein is thought to funnel zinc cations to the CzcA transport protein.
Length (amino acid): 520
Reference: Nies et al. 1989; Pubmed- 2678100, Waidner et al. 2002; Pubmed- 12426358
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Similar resistance genes in 'BacMet Predicted database' |
czcC | BacMet ID: BAC0121Code for: Efflux
Family: RND Superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839)Location: Plasmid pMOL30 (Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) ),
Compound: Cadmium (Cd), Zinc (Zn), Cobalt (Co)Description: Muter membrane protein; CzcC protein appears to modify the specificity of the system, perhaps by acting on the CzcB protein. When the CzcC protein is added to CzcA and CzcB, the efflux system gains specificity for cadmium and cobalt.
Length (amino acid): 418
Reference: Nies et al. 1989; Pubmed- 2678100
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Similar resistance genes in 'BacMet Predicted database' |
czcD | BacMet ID: BAC0122Code for: Efflux
Family: Cation diffusion facilitator (CDF) transporter familySequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839)Location: Plasmid pMOL30 (Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) ),
Compound: Cadmium (Cd), Zinc (Zn), Cobalt (Co)Description: Transporter gene influence Zn++ and Cd++ resistance; Necessary for activation of the czc determinant; may function as a membrane-bound sensor protein or as a metal ion transporter.
Length (amino acid): 316
Reference: Nies et al. 1989; Pubmed- 2678100
|
Similar resistance genes in 'BacMet Predicted database' |
czcE | BacMet ID: BAC0123Code for: Binding protein
Family: Cation efflux familySequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839)Location: Plasmid pMOL30 (Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) ),
Compound: Cadmium (Cd), Zinc (Zn), Cobalt (Co)Description: CzcE, involved in Cd(II), Zn(II), Co(II) resistance; copH like protein; Co/Zn/Cd efflux system transmembrane protein
Length (amino acid): 133
Reference: Zoropogui et al. 2007; Pubmed- 18029263
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Similar resistance genes in 'BacMet Predicted database' |
czcP | BacMet ID: BAC0124Code for: Enzyme
Family: Cation transport ATPase (P-type) familySequence: FASTA
Cross-database IDs: Link
Organism: Cupriavidus metallidurans CH34Location: Plasmid pMOL30 (Cupriavidus metallidurans CH34)
Compound: Cadmium (Cd), Zinc (Zn), Cobalt (Co)Description: P(IB4)-type ATPases; CzcP seemed to enhance metal resistance but relies on the action of the P(IB2)-type ATPases such as zntA, cadA, pbrA etc.
Length (amino acid): 829
Reference: Scherer et al. 2009; Pubmed- 19602147
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Similar resistance genes in 'BacMet Predicted database' |
czcR | BacMet ID: BAC0125Code for: Regulator
Family: Contains 1 response regulatory domainSequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839)Location: Plasmid pMOL30 (Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) ),
Compound: Cadmium (Cd), Zinc (Zn), Cobalt (Co)Description: Transcriptional activator protein CzcR; Member of the two-component regulatory system CzcS/CzcR involved in the control of cobalt, zinc and cadmium homeostasis
Length (amino acid): 225
Reference: Nies et al. 1992; Pubmed- 1459958
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Similar resistance genes in 'BacMet Predicted database' |
czcS | BacMet ID: BAC0126Code for: Regulator
Family: Contains 1 HAMP domain, 1 histidine kinase domainSequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839)Location: Plasmid pMOL30 (Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) )
Compound: Cadmium (Cd), Zinc (Zn), Cobalt (Co)Description: Sensor protein CzcS; Member of the two-component regulatory system CzcS/CzcR involved in the control of cobalt, zinc and cadmium homeostasis. Probably activates CzcR by phosphorylation.
Length (amino acid): 476
Reference: Van der Lelie et al. 1997; Pubmed- 9044283
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Similar resistance genes in 'BacMet Predicted database' |
cznA | BacMet ID: BAC0127Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Helicobacter mustelae (strain ATCC 43772/LMG 18044/NCTC 12198/12198)(Campylobacter mustelae)Location: Chromosome
Compound: Cadmium (Cd), Zinc (Zn), Nickel (Ni)Description: Cadmium-zinc-nickel resistance protein cznA
Length (amino acid): 1019
Reference: Stahler et al. 2006; Pubmed- 16790756
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Similar resistance genes in 'BacMet Predicted database' |
cznB | BacMet ID: BAC0128Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Helicobacter mustelae (strain ATCC 43772/LMG 18044/NCTC 12198/12198)(Campylobacter mustelae)Location: Chromosome
Compound: Cadmium (Cd), Zinc (Zn), Nickel (Ni)Description: Cadmium-zinc-nickel resistance protein cznB
Length (amino acid): 351
Reference: Stahler et al. 2006; Pubmed- 16790756
|
Similar resistance genes in 'BacMet Predicted database' |
cznC | BacMet ID: BAC0129Code for: Efflux
Family: RND Superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Helicobacter mustelae (strain ATCC 43772/LMG 18044/NCTC 12198/12198) (Campylobacter mustelae)Location: Chromosome
Compound: Cadmium (Cd), Zinc (Zn), Nickel (Ni)Description: Cadmium-zinc-nickel outer membrane efflux protein cznC
Length (amino acid): 424
Reference: Stahler et al. 2006; Pubmed- 16790756
|
Similar resistance genes in 'BacMet Predicted database' |
czrA | BacMet ID: BAC0130Code for: Regulator
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosaLocation: Chromosome
Compound: Zinc (Zn), Cadmium (Cd)Description: A repressor for thr czr operon; part of the czrSRCBA resistance operon
Length (amino acid): 1051
Reference: Valencia et al. 2013; Pubmed- 23578014; Hassan et al. 1999; Pubmed- 10570969, Kuroda et al. 1999; Pubmed- 10229265
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Similar resistance genes in 'BacMet Predicted database' |
czrB | BacMet ID: BAC0131Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosaLocation: Chromosome
Compound: Zinc (Zn), Cadmium (Cd)Description: czrB involved in cadmium and zinc resistance; part of the czrSRCBA resistance operon
Length (amino acid): 405
Reference: Hassan et al. 1999; Pubmed- 10570969, Kuroda et al. 1999; Pubmed- 10229265
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Similar resistance genes in 'BacMet Predicted database' |
dmeF | BacMet ID: BAC0132Code for: Efflux
Family: Cation diffusion facilitator (CDF) transporter familySequence: FASTA
Cross-database IDs: Link
Organism: Wautersia metallidurans CH34Location: Plasmid pMOL28 (Wautersia metallidurans CH34)
Compound: Cobalt (Co), Cadmium (Cd), Nickel (Ni)Description: DmeF is a broad-range metal ion transporter that functions in E. coli and W. metallidurans. dmeF plays the central role in cobalt homeostasis in Wautersia metallidurans CH34.
Length (amino acid): 382
Reference: Scherer et al. 2009; Pubmed- 19602147, Munkelt et al. 2004; Pubmed- 15547276
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Similar resistance genes in 'BacMet Predicted database' |
dmeF | BacMet ID: BAC0482Code for: Efflux
Family: Cation Diffusion Facilitator (CDF) familySequence: FASTA
Cross-database IDs: Link
Organism: Rhizobium leguminosarum bv. viciae UPM791Location: Chromosome
Compound: Cobalt (Co), Nickel (Ni)Description: Member of the dmeRF efflux system which is a metal responsive efflux system acts as a key element for metal homeostasis in Rhizobium leguminosarum under free-living and symbiotic conditions.
Length (amino acid): 323
Reference: Rubio-Sanz et al. 2013; Pubmed- 23934501
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Similar resistance genes in 'BacMet Predicted database' |
dmeR | BacMet ID: BAC0475Code for: Efflux
Family: Cation Diffusion Facilitator (CDF) familySequence: FASTA
Cross-database IDs: Link
Organism: Rhizobium leguminosarum bv. viciae UPM791Location: Chromosome
Compound: Cobalt (Co), Nickel (Ni)Description: Member of the dmeRF efflux system which is a metal responsive efflux system acts as a key element for metal homeostasis in Rhizobium leguminosarum under free-living and symbiotic conditions.
Length (amino acid): 90
Reference: Rubio-Sanz et al. 2013; Pubmed- 23934501
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Similar resistance genes in 'BacMet Predicted database' |
dnaK | BacMet ID: BAC0133Code for: Chaperone
Family: Heat shock protein 70 familySequence: FASTA
Cross-database IDs: Link
Organism: Mycobacterium tuberculosisLocation: Chromosome
Compound: Copper (Cu)Description: Chaperone protein DnaK
Length (amino acid): 625
Reference: Graubner et al. 2007; Pubmed- 17215254
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Similar resistance genes in 'BacMet Predicted database' |
dpr/dps | BacMet ID: BAC0134Code for: Binding protein
Family: Dps famailySequence: FASTA
Cross-database IDs: Link
Organism: Streptococcus suisLocation: Chromosome
Compound: Iron (Fe), Hydrogen Peroxide (H2O2) [class: Peroxides]Description: DNA protection during starvation protein; Protects DNA from oxidative damage by sequestering intracellular Fe2+ ion and storing it in the form of Fe3+ oxyhydroxide mineral. One hydrogen peroxide oxidizes two Fe2+ ions, which prevents hydroxyl radical production by the Fenton reaction. It binds and incorporates Fe2+ iron. Is responsible for hydrogen peroxide resistance. Does not bind DNA.
Length (amino acid): 172
Reference: Pulliainen et al. 2005; Pubmed- 16091046
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Similar resistance genes in 'BacMet Predicted database' |
dpsA | BacMet ID: BAC0135Code for: Binding protein
Family: Dps famailySequence: FASTA
Cross-database IDs: Link
Organism: Burkholderia pseudomallei 1710bLocation: Chromosome
Compound: Iron (Fe), Hydrogen Peroxide (H2O2) [class: Peroxides]Description: dpsA respsonses to stress, iron-binding protein; has role in iron ion homeostasis
Length (amino acid): 162
Reference: Loprasert et al. 2004; Pubmed- 15241582
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Similar resistance genes in 'BacMet Predicted database' |
dsbA | BacMet ID: BAC0136Code for: Enzyme
Family: Thioredoxin family. DsbA subfamily.Sequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Cadmium (Cd), Zinc (Zn), Mercury (Hg)Description: Disulfide oxidoreductase; Required for disulfide bond formation in some periplasmic proteins such as PhoA or OmpA. Acts by transferring its disulfide bond to other proteins and is reduced in the process. DsbA is reoxidized by DsbB. It is required for pilus biogenesis
Length (amino acid): 208
Reference: Rensing et al. 1997; Pubmed- 9098080, Bardwell et al. 1991; Pubmed- 1934062; Stafford et al. 1999; Pubmed- 10234837
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Similar resistance genes in 'BacMet Predicted database' |
dsbB | BacMet ID: BAC0137Code for: Enzyme
Family: DsbB familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Cadmium (Cd), Mercury (Hg)Description: Disulfide oxidoreductase; The dsbB gene codes for a transmembrane protein that is responsible for reoxidizing the periplasmic dsbA-encoded disulfide oxidoreductase; Required for disulfide bond formation in some periplasmic proteins such as PhoA or OmpA
Length (amino acid): 176
Reference: Stafford et al. 1999; Pubmed- 10234837
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Similar resistance genes in 'BacMet Predicted database' |
dsbC | BacMet ID: BAC0138Code for: Enzyme
Family: Thioredoxin family. DsbC subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Copper (Cu)Description: Disulfide isomerase; DsbC rearranges incorrect disulfide bonds formed by dsbA during oxidative protein folding under non-stress conditions. DsbC, a periplasmic thiol-disulfide oxidoreductase, appears to function as a disulfide isomerase both in vitro and in vivo. In vitro, DsbC has been shown to rearrange non-native disulfides in well studied isomerization substrates such as BPTI and RNase A. In vivo, DsbC is required for full activity of a handful of proteins containing at least one non-consecutive disulfide bond.
Length (amino acid): 236
Reference: Hiniker et al. 2005; Pubmed- 16087673
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Similar resistance genes in 'BacMet Predicted database' |
ebrA | BacMet ID: BAC0139Code for: Efflux
Family: SMR superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Bacillus subtilisLocation: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Pyronin Y [class: Xanthene], Safranin O [class: Azin]Description: Part of a multidrug efflux pump. Confers resistance to cationic lipophilic dyes such as ethidium bromide, Acriflavine, pyronin Y and safranin O. The efflux is probably coupled to an influx of proton
Length (amino acid): 105
Reference: Masaoka et al. 2000; Pubmed- 10735876, Kikukawa et al. 2006; Pubmed- 16750162, Zhang et al. 2007; Pubmed- 17417881
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Similar resistance genes in 'BacMet Predicted database' |
ebrB | BacMet ID: BAC0140Code for: Efflux
Family: SMR superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Bacillus subtilisLocation: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Pyronin Y [class: Xanthene], Safranin O [class: Azin]Description: Part of a multidrug efflux pump. Confers resistance to cationic lipophilic dyes such as ethidium bromide, Acriflavine, pyronin Y and safranin O. The efflux is probably coupled to an influx of protons
Length (amino acid): 117
Reference: Masaoka et al. 2000; Pubmed- 10735876, Kikukawa et al. 2006; Pubmed- 16750162, Zhang et al. 2007; Pubmed- 17417881
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Similar resistance genes in 'BacMet Predicted database' |
eefA | BacMet ID: BAC0494Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Klebsiella pneumoniae LM21Location: Chromosome
Compound: Hydrochloric acid (HCl) [class: Acid]Description: A periplasmic intermediate, EefA. Part of the EefXABC operon. The tripartite efflux system confers measurable ecological benefits in K. pneumoniae with high competition potential on surviving in inorganic acid environments.
Length (amino acid): 374
Reference: Coudeyras et al. 2008; Pubmed- 18644883
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Similar resistance genes in 'BacMet Predicted database' |
eefX | BacMet ID: BAC0495Code for: Unknown
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Klebsiella pneumoniae LM21Location: Chromosome
Compound: Hydrochloric acid (HCl) [class: Acid]Description: Part of eefXABC operon in K. pneumoniae. This gene is absent in the similar efflux system eefABC in other bacteria (such as Enterobacter aerogenes). Comaparative study suggests that it could be a regulator of the EefABC tripartite efflux system. The tripartite efflux system confers measurable ecological benefits in K. pneumoniae with high competition potential on surviving in inorganic acid environments.
Length (amino acid): 61
Reference: Coudeyras et al. 2008; Pubmed- 18644883
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Similar resistance genes in 'BacMet Predicted database' |
emeA | BacMet ID: BAC0141Code for: Efflux
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Only gram -ve, Enterococcus faecalis (Streptococcus faecalis)Location: Chromosome
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)]Description: Multidrug efflux pump emeA
Length (amino acid): 393
Reference: Lee et al. 2003 ; Pubmed- 12576692
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Similar resistance genes in 'BacMet Predicted database' |
emhA | BacMet ID: BAC0142Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)Location: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Crystal Violet [class: Triarylmethane], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate]Description: Efflux transporter, membrane fusion protein subunit EmhA
Length (amino acid): 385
Reference: Tian et al. 2010; Pubmed- 19833777, Hearn et al. 2003; Pubmed- 14563857
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Similar resistance genes in 'BacMet Predicted database' |
emhB | BacMet ID: BAC0143Code for: Efflux
Family: Hydrophobe/amphiphile efflux-1 (HAE1) familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)Location: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Crystal Violet [class: Triarylmethane], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate]Description: Protein export membrane protein emhB
Length (amino acid): 1054
Reference: Tian et al. 2010; Pubmed- 19833777, Hearn et al. 2003; Pubmed- 14563857
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Similar resistance genes in 'BacMet Predicted database' |
emhC | BacMet ID: BAC0144Code for: Efflux
Family: RND Superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)Location: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Crystal Violet [class: Triarylmethane], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate]Description: Efflux transporter, outer membrane factor lipoprotein EmhC
Length (amino acid): 486
Reference: Tian et al. 2010; Pubmed- 19833777, Hearn et al. 2003; Pubmed- 14563857
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Similar resistance genes in 'BacMet Predicted database' |
emhR | BacMet ID: BAC0145Code for: Regulator
Family: Contains 1 HTH tetR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477)Location: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Crystal Violet [class: Triarylmethane], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate]Description: Regulator of emhABC efflux system, EmhR
Length (amino acid): 210
Reference: Tian et al. 2010; Pubmed- 19833777, Hearn et al. 2003; Pubmed- 14563857
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Similar resistance genes in 'BacMet Predicted database' |
emmdR | BacMet ID: BAC0146Code for: Efflux
Family: MATE familySequence: FASTA
Cross-database IDs: Link
Organism: Enterobacter cloacaeLocation: Chromosome
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Rhodamine 6G [class: Xanthene]Description: MATE efflux family protein; EmmdR is an H+-drug antiporter but not a Na+ driven efflux pump
Length (amino acid): 462
Reference: He et al. 2011; Pubmed- 21822795
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Similar resistance genes in 'BacMet Predicted database' |
emrA | BacMet ID: BAC0147Code for: Efflux
Family: Membrane Fusion Protein (MFP)Sequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Phenylmercury Acetate [class: Organo-mercury], 2-Chlorophenylhydrazine [class: Hydrazine], Carbonylcyanide m-chlorophenyl hydrazone (CCCP) [class: Hydrazone], Tetrachlorosalicylanilide (TCS) [class: Salicylanilide]Description: The emr locus confers resistance to substances of high hydrophobicity. EmrA probably participate in a transport system to extrude toxins and drugs from the cell.
Length (amino acid): 390
Reference: Lomovskaya et al. 1992; Pubmed- 1409590
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Similar resistance genes in 'BacMet Predicted database' |
emrAsm | BacMet ID: BAC0499Code for: Efflux
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Stenotrophomonas maltophilia (strain K279a)Location: Chromosome
Compound: Carbonyl cyanide 3-chlorophenylhydrazone (CCCP) [class: Hydrazone], Tetrachlorosalicylanilide (TCS) [class: Salicylanilide]Description: Part of EmrCABsm efflux pump which is a similar pump found in E. coli (EmrCAB) with below 50% amino acid identities. EmrCsm and EmrAB are essential for the function of the EmrCABsm pump. EmrCABsm pump may have a physiological role in evading naturally produced molecules from the environment or host-derived compounds, rather than in antimicrobial extrusion, allowing S. maltophilia to survive in its ecological niche. It can confer resistance to hydrophobic antibiotics nalidixic acid and erythromycin.
Length (amino acid): 393
Reference: Huang et al. 2013; Pubmed- 23794602
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Similar resistance genes in 'BacMet Predicted database' |
emrB | BacMet ID: BAC0148Code for: Enzyme
Family: Major facilitator superfamily (MFS)-EmrB familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Phenylmercury Acetate [class: Organo-mercury], 2-Chlorophenylhydrazine [class: Hydrazine], Carbonylcyanide m-chlorophenyl hydrazone (CCCP) [class: Hydrazone]Description: Multidrug resistance protein B, Located in cell inner membrane, Translocase that confers resistance to substances of high hydrophobicity
Length (amino acid): 512
Reference: Lomovskaya et al. 1992; Pubmed- 1409590
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Similar resistance genes in 'BacMet Predicted database' |
emrBsm | BacMet ID: BAC0500Code for: Efflux
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Stenotrophomonas maltophilia (strain K279a)Location: Chromosome
Compound: Carbonyl cyanide 3-chlorophenylhydrazone (CCCP) [class: Hydrazone], Tetrachlorosalicylanilide (TCS) [class: Salicylanilide]Description: Part of EmrCABsm efflux pump which is a similar pump found in E. coli (EmrCAB) with below 50% amino acid identities. EmrCsm and EmrAB are essential for the function of the EmrCABsm pump. EmrCABsm pump may have a physiological role in evading naturally produced molecules from the environment or host-derived compounds, rather than in antimicrobial extrusion, allowing S. maltophilia to survive in its ecological niche. It can confer resistance to hydrophobic antibiotics nalidixic acid and erythromycin.
Length (amino acid): 528
Reference: Huang et al. 2013; Pubmed- 23794602
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Similar resistance genes in 'BacMet Predicted database' |
emrCsm | BacMet ID: BAC0501Code for: Efflux
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Stenotrophomonas maltophilia (strain K279a)Location: Chromosome
Compound: Carbonyl cyanide 3-chlorophenylhydrazone (CCCP) [class: Hydrazone], Tetrachlorosalicylanilide (TCS) [class: Salicylanilide]Description: Outer membrane protein EmrCsm. Part of EmrCABsm efflux pump which is a similar pump found in E. coli (EmrCAB) with below 50% amino acid identities. EmrCsm and EmrAB are essential for the function of the EmrCABsm pump. EmrCABsm pump may have a physiological role in evading naturally produced molecules from the environment or host-derived compounds, rather than in antimicrobial extrusion, allowing S. maltophilia to survive in its ecological niche. It can confer resistance to hydrophobic antibiotics nalidixic acid and erythromycin.
Length (amino acid): 497
Reference: Huang et al. 2013; Pubmed- 23794602
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Similar resistance genes in 'BacMet Predicted database' |
emrD | BacMet ID: BAC0149Code for: Efflux
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate]Description: Multidrug resistance pump that participates in a low energy shock adaptative response
Length (amino acid): 394
Reference: Naroditskaya et al. 1993; Pubmed- 8240355, Nishino et al. 2001; Pubmed- 11566977
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Similar resistance genes in 'BacMet Predicted database' |
emrD-3 | BacMet ID: BAC0534Code for: Efflux
Family: MFS superfamiy, Bcr/CflA subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio cholerae O395Location: Chromosome
Compound: Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Rhodamine 6G [class: Xanthene], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate]Description: It is an intrinsic membrane protein. Multidrug resistance protein D. EmrD-3-mediated efflux is potentiated by a proton gradient across the membrane. It can confer resistance to antibiotics such as linezolid, rifampin, minocycline etc.
Length (amino acid): 379
Reference: Smith et al. 2009; Pubmed- 19876617
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Similar resistance genes in 'BacMet Predicted database' |
emrE/mvrC | BacMet ID: BAC0150Code for: Efflux/Membrane protein
Family: Small multidrug resistance (SMR) familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (Strain K12)Location: Chromosome
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Methyl Viologen [class: Paraquat], Ethidium Bromide [class: Phenanthridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)]Description: It codes for a membrane protein emrE/MvrC, exhibits resistance to methyl viologen by reducing permeability. Overexoression of MvrC protein induces or activates the MvrA protein, which reduces the toxic species produced by metyl viologen. It doesn’t confer resistance to plumbagin dye. It expels positively charged hydrophobic drugs across the inner membrane of E. coli., thereby conferring resistance to a wide range of toxic compounds. The drug efflux is coupled to an influx of protons. It is involved in the resistance of E. coli cells to methyl viologen, ethidium bromide and acriflavine. Is also able to transport tetraphenylphosphonium (TPP+) and benzylkonium.
Length (amino acid): 110
Reference: Morimyo et al. 1992; Pubmed- 1320256, Yerushalmi et al. 1995; Pubmed- 7896833, Yerushalmi et al. 2000; Pubmed- 10681497, Rotem et al. 2004; Pumed- 15371426
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Similar resistance genes in 'BacMet Predicted database' |
emrK | BacMet ID: BAC0151Code for: Efflux
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Crystal Violet [class: Triarylmethane], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Sodium Deoxycholate (SDC) [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate]Description: EmrKY-TolC multidrug resistance efflux pump, membrane fusion protein; overexpression resistance to deoxycholate
Length (amino acid): 387
Reference: Tanabe et al. 1997; Pubmed- 12501312, Kato et al. 2000; Pubmed- 10923791
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Similar resistance genes in 'BacMet Predicted database' |
emrR | BacMet ID: BAC0559Code for: Regulator
Family: MarR familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Carbonyl cyanide 3-chlorophenylhydrazone (CCCP) [class: Hydrazone]Description: Negative regulator of the multidrug operon emrAB.
Length (amino acid): 176
Reference: Lomovskaya et al. 1995; Pubmed- 7730261
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Similar resistance genes in 'BacMet Predicted database' |
emrRsm | BacMet ID: BAC0502Code for: Regulator
Family: MarR familySequence: FASTA
Cross-database IDs: Link
Organism: Stenotrophomonas maltophilia (strain K279a)Location: Chromosome
Compound: Carbonyl cyanide 3-chlorophenylhydrazone (CCCP) [class: Hydrazone], Tetrachlorosalicylanilide (TCS) [class: Salicylanilide]Description: EmrRCABsm operon is negatively regulated by a MarR-type regulator EmrRsm.
Length (amino acid): 147
Reference: Huang et al. 2013; Pubmed- 23794602
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Similar resistance genes in 'BacMet Predicted database' |
emrY | BacMet ID: BAC0153Code for: Efflux
Family: MFS superfamily (EmrB family)Sequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Ethidium Bromide [class: Phenanthridine]Description: Multidrug resistance protein Y
Length (amino acid): 512
Reference: Tanabe et al. 1997; Pubmed- 12501312, Kato et al. 2000; Pubmed- 10923791, Han et al. 2010; Pubmed- 20128927
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Similar resistance genes in 'BacMet Predicted database' |
evgA | BacMet ID: BAC0154Code for: Regulator
Family: Contains 1 HTH luxR-type DNA-binding domain, Contains 1 response regulatory domainSequence: FASTA
Cross-database IDs: Link
Organism: Only gram -ve, Escherichia coli (Strain K12)Location: Chromosome
Compound: Sodium Deoxycholate (SDC) [class: Acid]Description: Member of the two-component regulatory system EvgS/EvgA. Regulates the expression of emrKY operon and yfdX. Seems also to control expression of at least one other multidrug efflux operon.
Length (amino acid): 204
Reference: Kato et al. 2000; Pubmed- 10923791, Nishino et al. 2001; Pubmed- 11157960
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Similar resistance genes in 'BacMet Predicted database' |
evgS | BacMet ID: BAC0155Code for: Regulator
Family: Contains 1 histidine kinase domain, 1 response regulatory domain, 1 HPt domainSequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Sodium Deoxycholate (SDC) [class: Acid]Description: Sensor protein EvgS; Member of the two-component regulatory system EvgS/EvgA. Phosphorylates EvgA via a four-step phosphorelay in response to environmental signals
Length (amino acid): 1197
Reference: Kato et al. 2000; Pubmed- 10923791, Nishino et al. 2001; Pubmed- 11157960
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Similar resistance genes in 'BacMet Predicted database' |
fabI | BacMet ID: BAC0156Code for: Enzyme
Family: short-chain dehydrogenases/reductases (SDR) family.Sequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Triclosan [class: Phenolic compounds]Description: Enoyl-[acyl-carrier-protein] reductase [NADH] FabI; Catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP). Involved in the elongation cycle of fatty acid which are used in the lipid metabolism and in the biotin biosynthesis; enoyl-ACP reductase is the FabI protein of Escherichia coli that is the target of the antibacterial compound, triclosan; some Gram-positive bacteria are naturally resistant to triclosan due to the presence of the triclosan-resistant enoyl-ACP reductase isoforms, FabK, FabV and FabL.
Length (amino acid): 262
Reference: McMurry et al. 1998; Pubmed- 9707111
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Similar resistance genes in 'BacMet Predicted database' |
fabK | BacMet ID: BAC0157Code for: Enzyme
Family: Nitronate monooxygenase (NMO) familySequence: FASTA
Cross-database IDs: Link
Organism: Streptococcus pneumoniaeLocation: Chromosome
Compound: Triclosan [class: Phenolic compounds]Description: Trans-2-enoyl-ACP reductase II; a TIM barrel triclosan-resistannt flavoprotein; It is one of the taret sites for antibacterial triclosan; expression of FabK confers triclosan resistance.
Length (amino acid): 324
Reference: Heath et al. 2000; Pubmed- 10910344
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Similar resistance genes in 'BacMet Predicted database' |
fabL/ygaA | BacMet ID: BAC0158Code for: Enzyme
Family: short-chain dehydrogenases/reductases (SDR) family.Sequence: FASTA
Cross-database IDs: Link
Organism: Bacillus subtilis (strain 168)Location: Chromosome
Compound: Triclosan [class: Phenolic compounds]Description: Enoyl-(acyl-carrier-protein) reductase (NADPH) FabL; It catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP). It confers resistance to triclosan. It is an alternative target site where fabI is absent for antibacterial compound triclosan.
Length (amino acid): 250
Reference: Heath et al. 2000; Pubmed- 11007778
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Similar resistance genes in 'BacMet Predicted database' |
fabV | BacMet ID: BAC0159Code for: Enzyme
Family: short-chain dehydrogenases/reductases (SDR) family.Sequence: FASTA
Cross-database IDs: Link
Organism: Vibrio chloerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)Location: Chromosome
Compound: Triclosan [class: Phenolic compounds]Description: Enoyl-(acyl-carrier-protein) (ACP) reductase is a key enzyme in type II fatty-acid synthases that catalyzes the last step in each elongation cycle; Predominately found in Vibrio species and closely related organisms where it seems to be the sole enoyl-ACP reductase. It is a antibacterial target site for triclosan where fabI and other isoforms such as fabL, fabI or fabK are absent. Triclosan expression of FabV in organism results in markedly increased resistance to triclosan. There may be bacteria that have both FabV and FabK such as various of the Clostridia such as Clostridium tetani.
Length (amino acid): 401
Reference: Massengo-Tiasse et al. 2008; Pubmed- 18032386, Zhu et al. 2010; Pubmed- 19933806,
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Similar resistance genes in 'BacMet Predicted database' |
farA | BacMet ID: BAC0503Code for: Efflux
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Neisseria gonorrhoeae F19Location: Chromosome
Compound: Phenylmercury Acetate [class: Organo-mercury], Carbonyl cyanide 3-chlorophenylhydrazone (CCCP) [class: Hydrazone], Oleic acid [class: Free Fatty Acids], Linoleic acid [class: Free Fatty Acids], Palmitic acid [class: Free Fatty Acids], Triton X-100 [class: Polyethylene glycol]Description: A membrane fusion protein. The farAB operon of Neisseria gonorrhoeae encodes an efflux pump which mediates gonococcal resistance to antibacterial fatty acids. This efflux pump requires the MtrE protein as the outer membrane channel to export antibacterial FAs from inside the cell.
Length (amino acid): 394
Reference: Lee et al. 1999; Pubmed- 10447892
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Similar resistance genes in 'BacMet Predicted database' |
farB | BacMet ID: BAC0504Code for: Efflux
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Neisseria gonorrhoeae F19Location: Chromosome
Compound: Phenylmercury Acetate [class: Organo-mercury], Carbonyl cyanide 3-chlorophenylhydrazone (CCCP) [class: Hydrazone], Oleic acid [class: Free Fatty Acids], Linoleic acid [class: Free Fatty Acids], Palmitic acid [class: Free Fatty Acids], Triton X-100 [class: Polyethylene glycol]Description: A cytoplasmic transporter protein. The farAB operon of Neisseria gonorrhoeae encodes an efflux pump which mediates gonococcal resistance to antibacterial fatty acids. This efflux pump requires the MtrE protein as the outer membrane channel to export antibacterial FAs from inside the cell.
Length (amino acid): 507
Reference: Lee et al. 1999; Pubmed- 10447892
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Similar resistance genes in 'BacMet Predicted database' |
farR | BacMet ID: BAC0505Code for: Regulator
Family: MarR familySequence: FASTA
Cross-database IDs: Link
Organism: Neisseria gonorrhoeae, Neisseria meningitidis serogroup B (strain MC58)Location: Chromosome
Compound: Palmitic acid [class: Free Fatty Acids]Description: FarR negatively controls expression of farAB by directly binding to the farAB promoter. MtrR binds to the farR promoter, thereby repressing farR expression. MtrR regulates farAB in a positive fashion by modulating farR expression.
Length (amino acid): 146
Reference: Lee et al. 2003; Pubmed- 14645274
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Similar resistance genes in 'BacMet Predicted database' |
fbpA | BacMet ID: BAC0160Code for: Binding protein
Family: ATP-binding Cassette (ABC)-type ATPase superfamily. Bacterial solute-binding protein 1 familySequence: FASTA
Cross-database IDs: Link
Organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)Location: Chromosome
Compound: Iron (Fe), Gallium (Ga)Description: Fe(3+)-binding/Iron-utilization periplasmic protein FbpA; Part of the ABC transporter complex FbpABC involved in Fe3+ ions import. This protein specifically binds Fe3+ and is involved in its transmembrane transport
Length (amino acid): 332
Reference: Anderson et al. 2004; Pubmed- 15342592
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Similar resistance genes in 'BacMet Predicted database' |
fbpB | BacMet ID: BAC0161Code for: Binding protein
Family: ATP-binding Cassette (ABC)-type ATPase superfamily. Binding-protein-dependent transport system permease family. FbpB subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)Location: Chromosome
Compound: Iron (Fe), Gallium (Ga)Description: Fe(3+)-transport system permease protein FbpB; Part of the ABC transporter complex FbpABC involved in Fe3+ ions import. This protein specifically binds Fe3+ and is involved in its transmembrane transport
Length (amino acid): 506
Reference: Anderson et al. 2004; Pubmed- 15342592
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Similar resistance genes in 'BacMet Predicted database' |
fbpC | BacMet ID: BAC0162Code for: Binding protein
Family: ATP-binding Cassette (ABC)-type ATPase superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)Location: Chromosome
Compound: Iron (Fe), Gallium (Ga)Description: Fe(3+) ions import ATP-binding protein FbpC; Part of the ABC transporter complex FbpABC involved in Fe3+ ions import. Responsible for energy coupling to the transport system
Length (amino acid): 356
Reference: Anderson et al. 2004; Pubmed- 15342592
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Similar resistance genes in 'BacMet Predicted database' |
fecD | BacMet ID: BAC0163Code for: Enzyme
Family: Binding-protein-dependent transport system permease family. FecCD subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Nickel (Ni), Cobalt (Co)Description: Fe(3+) dicitrate transport system permease protein FecD; Part of the binding-protein-dependent transport system for citrate-dependent Fe3+. Probably responsible for the translocation of the substrate across the membrane.
Length (amino acid): 318
Reference: Stoof et al. 2010; Pubmed- 20643857
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Similar resistance genes in 'BacMet Predicted database' |
fecE | BacMet ID: BAC0164Code for: Membrane Transporter
Family: ABC transporter superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Nickel (Ni), Cobalt (Co)Description: Fe(3+) dicitrate transport ATP-binding protein FecE; Part of the binding-protein-dependent transport system for citrate-dependent Fe3+. Probably responsible for energy coupling to the transport system
Length (amino acid): 255
Reference: Stoof et al. 2010; Pubmed- 20643857
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Similar resistance genes in 'BacMet Predicted database' |
fetA/ybbL | BacMet ID: BAC0165Code for: Binding protein
Family: ABC transporter superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Iron (Fe), Hydrogen Peroxide (H2O2) [class: Peroxides]Description: FetA, the ATP binding component subunit; FetAB allows for increased resistance to oxidative stress in the presence of iron
Length (amino acid): 225
Reference: Nicolaou et al. 2013; Pubmed- 24038693
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Similar resistance genes in 'BacMet Predicted database' |
fetB/ybbM | BacMet ID: BAC0166Code for: Membrane protein
Family: ABC transporter superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Iron (Fe), Hydrogen Peroxide (H2O2) [class: Peroxides]Description: FetB/YbbM is a membrane protein. FetAB allows for increased resistance to oxidative stress in the presence of iron
Length (amino acid): 259
Reference: Nicolaou et al. 2013; Pubmed- 24038693
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Similar resistance genes in 'BacMet Predicted database' |
fieF/yiip | BacMet ID: BAC0167Code for: Efflux
Family: Cation diffusion facilitator (CDF) transporter familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Iron (Fe), Zinc (Zn), Cobalt (Co), Cadmium (Cd), Nickel (Ni)Description: Iron-efflux transporter responsible for iron detoxification. Also able to transport Zn2+ in a proton-dependent manner. The CDF protein, FieF, is mainly a ferrous iron detoxifying protein but also mediated some resistance against other divalent metal cations such as Zn(II), Co(II), Cd(II), and Ni(II) in W. metallidurans or Escherichia coli.
Length (amino acid): 300
Reference: Grass et al. 2005; Pubmed- 15549269, Munkelt et al. 2004; Pubmed- 15547276
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Similar resistance genes in 'BacMet Predicted database' |
fptA | BacMet ID: BAC0168Code for: Porin
Family: General Bacterial Porin family (GBP) superfamily. TonB-dependent receptor familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)Location: Chromosome
Compound: Iron (Fe), Cobalt (Co), Nickel (Ni), Gallium (Ga)Description: Fe(3+)-pyochelin receptor FptA; High-affinity outer membrane receptor required for the transport of Fe3+-pyochelin
Length (amino acid): 720
Reference: Braud et al. 2009; Pubmed- 19329644
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Similar resistance genes in 'BacMet Predicted database' |
fpvA | BacMet ID: BAC0169Code for: Porin
Family: General Bacterial Porin family (GBP) superfamily. TonB-dependent receptor familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)Location: Chromosome
Compound: Manganese (Mn), Iron (Fe), Cobalt (Co), Zinc (Zn), Nickel (Ni), Copper (Cu), Cadmium (Cd), Gallium (Ga)Description: Ferripyoverdine receptor A (fpvA); Receptor for the siderophore ferripyoverdine; Located in cell outer membrane
Length (amino acid): 815
Reference: Hannauer et al. 2012; Pubmed- 22187978, Braud et al. 2009; Pubmed- 19207567
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Similar resistance genes in 'BacMet Predicted database' |
frnE | BacMet ID: BAC0170Code for: Enzyme
Family: Cation diffusion facilitator (CDF) transporter familySequence: FASTA
Cross-database IDs: Link
Organism: Deinococcus radioduransLocation: Chromosome
Compound: Cadmium (Cd), Hydrogen Peroxide (H2O2) [class: Peroxides]Description: Disulfide Isomerase Chaperone; It is a protein disulfide isomerase in vitro and has a role in oxidative stress tolerance of D. radiodurans possibly by protecting the damaged cellular proteins from inactivation; is a protein disulfide isomerase in vitro and has a role in oxidative stress tolerance of D. radiodurans possibly by protecting the damaged cellular proteins from inactivation
Length (amino acid): 252
Reference: Khairnar et al. 2013; Pubmed- 23603741
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Similar resistance genes in 'BacMet Predicted database' |
furA | BacMet ID: BAC0171Code for: Regulator
Family: Fur familySequence: FASTA
Cross-database IDs: Link
Organism: Mycobacterium tuberculosisLocation: Chromosome
Compound: Iron (Fe)Description: Transcriptional regulator FurA; Represses transcription of the catalase-peroxidase gene katG and its own transcription by binding to the promoter region in a redox-dependent manner
Length (amino acid): 147
Reference: Wong et al. 1999; Pubmed- 9864233
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Similar resistance genes in 'BacMet Predicted database' |
G2alt | BacMet ID: BAC0490Code for: Enzyme
Family: PP-loop ATPase superfamily/QueC familySequence: FASTA
Cross-database IDs: Link
Organism: Anoxybacillus gonensis G2Location: Chromosome
Compound: Aluminium (Al)Description: The ATPase activity of G2alt requires Mg2+ and Na+ ions, while Zn2+ and Al3+ stimulate the activity, Cd2+ and Ag+ reduces the activity and Li+, Cu2+ and Co2+ inhibits the activity.
Length (amino acid): 221
Reference: Beris et al. 2011; Pubmed- 21887649
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Similar resistance genes in 'BacMet Predicted database' |
gadA | BacMet ID: BAC0172Code for: Enzyme
Family: Group II decarboxylase familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Hydrochloric acid (HCl) [class: Acid]Description: TolC is required for expression of glutamate decarboxylase (GadA, GadB), a key component of glutamate-dependent acid resistance (Gad); Converts glutamate to gamma-aminobutyrate (GABA), consuming one intracellular proton in the reaction. The gad system helps to maintain a near-neutral intracellular pH when cells are exposed to extremely acidic conditions. The ability to survive transit through the acidic conditions of the stomach is essential for successful colonization of the mammalian host by commensal and pathogenic bacteria.
Length (amino acid): 466
Reference: De Biase et al. 1996; Pubmed- 8954890, De Biase et al. 1999; Pubmed- 10383761
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Similar resistance genes in 'BacMet Predicted database' |
gadB | BacMet ID: BAC0173Code for: Enzyme
Family: Group II decarboxylase familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Hydrochloric acid (HCl) [class: Acid]Description: TolC is required for expression of glutamate decarboxylase (GadA, GadB), a key component of glutamate-dependent acid resistance (Gad); Converts glutamate to gamma-aminobutyrate (GABA), consuming one intracellular proton in the reaction. The gad system helps to maintain a near-neutral intracellular pH when cells are exposed to extremely acidic conditions. The ability to survive transit through the acidic conditions of the stomach is essential for successful colonization of the mammalian host by commensal and pathogenic bacteria.
Length (amino acid): 466
Reference: De Biase et al. 1996; Pubmed- 8954890, De Biase et al. 1999; Pubmed- 10383761
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Similar resistance genes in 'BacMet Predicted database' |
gadC/xasA | BacMet ID: BAC0174Code for: Enzyme
Family: Amino acid-polyamine-organocation (APC) superfamily. Glutamate:GABA antiporter (GGA) familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Hydrochloric acid (HCl) [class: Acid]Description: GadC functions as a transporter for the product of glutamate decarboxylase, g-aminobutyrate
Length (amino acid): 511
Reference: Hersh et al. 1996; Pubmed- 8682809, Waterman et al. 1996; Pubmed- 8885264
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Similar resistance genes in 'BacMet Predicted database' |
gadE/yhiE | BacMet ID: BAC0175Code for: Regulator
Family: Contains 1 HTH luxR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Hydrochloric acid (HCl) [class: Acid]Description: Regulates the expression of several genes involved in acid resistance. Required for the expression of gadA and gadBC, among others, regardless of media or growth conditions. Binds directly to the 20 bp GAD box found in the control regions of both loci.
Length (amino acid): 175
Reference: Ma et al. 2003; Pubmed- 12940989, Hommais et al. 2004; Pubmed- 14702398
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Similar resistance genes in 'BacMet Predicted database' |
gadW/yhiW | BacMet ID: BAC0176Code for: Regulator
Family: AraC familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Hydrochloric acid (HCl) [class: Acid]Description: Depending on the conditions (growth phase and medium), acts as a positive or negative regulator of gadA and gadBC. Repression occurs directly or via the repression of the expression of gadX. Activation occurs directly by the binding of GadW to the gadA and gadBC promoters.
Length (amino acid): 242
Reference: Ma et al. 2002; Pubmed- 12446650
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Similar resistance genes in 'BacMet Predicted database' |
gadX | BacMet ID: BAC0177Code for: Regulator
Family: AraC familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Hydrochloric acid (HCl) [class: Acid], Rhodamine 6G [class: Xanthene], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate]Description: Role in acid resistance, increases multidrug resistance in E. coli by activating the MdtEF multidrug efflux pump; Positively regulates the expression of about fifteen genes involved in acid resistance such as gadA, gadB and gadC. Depending on the conditions (growth phase and medium), can repress gadW. It can confer resistance to antibiotics such as oxacillin, cloxacillin, nafcillin, erythromycin etc.
Length (amino acid): 274
Reference: Nishino et al. 2008; Pubmed- 18297445, Shin et al. 2001; Pubmed- 11555293
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Similar resistance genes in 'BacMet Predicted database' |
gesA | BacMet ID: BAC0178Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)Location: Chromosome
Compound: Gold (Au), Methylene Blue [class: Thiazinium], Crystal Violet [class: Triarylmethane]Description: The gold (Au2+) resistance efflux pump, GesABC (induced by GolS in the presence of Au2+; also mediates drug resistance when induced by Au2+. Also exports a variety of organic chemicals including chloramphenicol.
Length (amino acid): 408
Reference: Pontel et al. 2007; Pubmed- 17919284, Conroy et al. 2010; Pubmed- 20497225
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Similar resistance genes in 'BacMet Predicted database' |
gesB | BacMet ID: BAC0179Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)Location: Chromosome
Compound: Gold (Au), Methylene Blue [class: Thiazinium], Crystal Violet [class: Triarylmethane]Description: The gold (Au2+) resistance efflux pump, GesABC (induced by GolS in the presence of Au2+; also mediates drug resistance when induced by Au2+. Also exports a variety of organic chemicals including chloramphenicol.
Length (amino acid): 1055
Reference: Pontel et al. 2007; Pubmed- 17919284, Conroy et al. 2010; Pubmed- 20497225
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Similar resistance genes in 'BacMet Predicted database' |
gesC | BacMet ID: BAC0180Code for: Efflux
Family: RND Superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)Location: Chromosome
Compound: Gold (Au), Methylene Blue [class: Thiazinium], Crystal Violet [class: Triarylmethane]Description: The gold (Au2+) resistance efflux pump, GesABC (induced by GolS in the presence of Au2+; also mediates drug resistance when induced by Au2+. Also exports a variety of organic chemicals including chloramphenicol.
Length (amino acid): 503
Reference: Pontel et al. 2007; Pubmed- 17919284, Conroy et al. 2010; Pubmed- 20497225
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Similar resistance genes in 'BacMet Predicted database' |
glpF | BacMet ID: BAC0181Code for: Channel
Family: Major Intrinsic protein (MIP) superfamily. MIP/aquaporin familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Antimony (Sb), Arsenic (As), Glycerol [class: Alcohol]Description: Glycerol uptake facilitator protein GlpF; Transporter of glycerol across the cytoplasmic membrane, with limited permeability to water and small uncharged compounds such as polyols
Length (amino acid): 281
Reference: Sanders et al. 1997; Pubmed- 9150238, Meng et al. 2004; Pubmed- 14970228
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Similar resistance genes in 'BacMet Predicted database' |
golS | BacMet ID: BAC0182Code for: Regulator
Family: Contains 1 HTH merR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)Location: Chromosome
Compound: Gold (Au)Description: merR-type regulator; GolS directly controls the expression of golT and golB; Each component of the GolS regulon, i.e. the P-type ATPase GolT; and the metal-binding polypeptide GolB, are required for full gold-tolerance
Length (amino acid): 154
Reference: Checa et al. 2007, Pubmed- 17244194, Espariz et al. 2007, Pubmed- 17768242
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Similar resistance genes in 'BacMet Predicted database' |
golT | BacMet ID: BAC0183Code for: Enzyme
Family: Cation transport ATPase (P-type) familySequence: FASTA
Cross-database IDs: Link
Organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)Location: Chromosome
Compound: Copper (Cu), Gold (Au)Description: Cation transporting P-type ATPase; belongs to the gold-responsive, gol regulon; In the absence of CopA, GolS becomes responsive to copper, inducing the expression of golT, which functionally substitutes CopA for cytosolic copper export
Length (amino acid): 762
Reference: Espariz et al. 2007, Pubmed- 17768242
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Similar resistance genes in 'BacMet Predicted database' |
hasF | BacMet ID: BAC0184Code for: Efflux
Family: RND Superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Serratia marcescensLocation: Chromosome
Compound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Ethidium Bromide [class: Phenanthridine]Description: TolC-homologue hasF involved in energy-dependent efflux
Length (amino acid): 505
Reference: Kumar et al. 2005; Pubmed- 16121228
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Similar resistance genes in 'BacMet Predicted database' |
hdeA/yhiB | BacMet ID: BAC0185Code for: Chaperone
Family: HdeA familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Hydrochloric acid (HCl) [class: Acid]Description: Acid stress chaperone HdeA; Required for optimal acid stress protection. Exhibits a chaperone-like activity only at pH below 3 by suppressing non-specifically the aggregation of denaturated periplasmic proteins. Important for survival of enteric bacteria in the acidic environment of the host stomach. Also promotes the solubilization at neutral pH of proteins that had aggregated in their presence at acidic pHs. May cooperate with other periplasmic chaperones such as DegP and SurA
Length (amino acid): 110
Reference: Hong et al. 2005; Pubmed- 15911614
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Similar resistance genes in 'BacMet Predicted database' |
hdeB/yhiC | BacMet ID: BAC0186Code for: Chaperone
Family: HdeB familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Hydrochloric acid (HCl) [class: Acid]Description: Acid stress chaperone HdeB; Required for optimal acid stress protection, which is important for survival of enteric bacteria in the acidic environment of the host stomach. Exhibits a chaperone-like activity at acidic pH by preventing the aggregation of many different periplasmic proteins.
Length (amino acid): 108
Reference: Kern et al. 2007; Pubmed- 17085547
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Similar resistance genes in 'BacMet Predicted database' |
hefA | BacMet ID: BAC0187Code for: Efflux
Family: RND Superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Helicobacter pylori (strain P12)Location: Chromosome
Compound: Hydrochloric acid (HCl) [class: Acid]Description: Outer-membrane protein of the HefABC efflux system HefA; Required for optimal acid stress protection, which is important for survival of enteric bacteria in the acidic environment. Exhibits a chaperone-like activity only at pH below 3 by suppressing non-specifically the aggregation of denaturated periplasmic proteins. Also promotes the solubilization at neutral pH of proteins that had aggregated in their presence at acidic pHs. May cooperate with other periplasmic chaperones such as DegP and SurA
Length (amino acid): 477
Reference: Liu et al. 2008; Pubmed- 18777600
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Similar resistance genes in 'BacMet Predicted database' |
hefC | BacMet ID: BAC0188Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Helicobacter pylori (strain P12)Location: Chromosome
Compound: Hydrochloric acid (HCl) [class: Acid]Description: Cytoplasmic pump protein of the HefABC efflux system HefC
Length (amino acid): 1028
Reference: Kutschke et al. 2005; Pubmed- 15980386
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Similar resistance genes in 'BacMet Predicted database' |
hmrM | BacMet ID: BAC0189Code for: Efflux
Family: MATE familySequence: FASTA
Cross-database IDs: Link
Organism: Haemophilus influenzaeLocation: Chromosome
Compound: Acriflavine [class: Acridine], 4,6-diamidino-2-phenylindole (DAPI) [class: Diamidine], Ethidium Bromide [class: Phenanthridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Sodium Deoxycholate (SDC) [class: Acid], Hoechst 33342 [class: Bisbenzimide]Description: Multidrug efflux pump that functions as a Na+/drug antiporter. Confers resistance to norfloxacin, Acriflavine, doxorubicin, ethidium bromide, tetraphenylphosphonium chloride, daunomycin, berberine and sodium deoxycholate
Length (amino acid): 464
Reference: Xu et al. 2003; Pubmed- 14695443
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Similar resistance genes in 'BacMet Predicted database' |
hmrR | BacMet ID: BAC0569Code for: Regulator
Family: Contains response regulatory domainSequence: FASTA
Cross-database IDs: Link
Organism: Rhizobium leguminosarum bv. ViciaeLocation: Chromosome
Compound: Copper (Cu), Hydrochloric acid (HCl) [class: Acid]Description: Regulates the transcription of actP. It detects cytoplasmic copper stress and activates transcription in response to increasing copper concentrations. In the absence of copper, it negatively regulates the transcription of actP
Length (amino acid): 129
Reference: Reeve et al. 2002; Pubmed- 11936079
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Similar resistance genes in 'BacMet Predicted database' |
hmrR | BacMet ID: BAC0190Code for: Regulator
Family: Contains 1 HTH merR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Sinorhizobium medicae (strain WSM419) (Ensifer medicae), Plasmid pSymA (Rhizobium meliloti (strain 1021) (Ensifer meliloti) (Sinorhizobium meliloti))Location: Plasmid pSMED01
Compound: Copper (Cu), Hydrochloric acid (HCl) [class: Acid]Description: Regulates the transcription of actP. It detects cytoplasmic copper stress and activates transcription in response to increasing copper concentrations. In the absence of copper, it negatively regulates the transcription of actP
Length (amino acid): 147
Reference: Reeve et al. 2002; Pubmed- 11936079
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Similar resistance genes in 'BacMet Predicted database' |
hoxN | BacMet ID: BAC0191Code for: Enzyme
Family: NiCo transporter familySequence: FASTA
Cross-database IDs: Link
Organism: Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha)Location: Plasmid megaplasmid pHG1 (Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) (Ralstonia eutropha)),
Compound: Nickel (Ni)Description: High-affinity nickel transporter hoxN responsible for nickel uptake. Necessary for high levels of activity of hydrogenase and urease.
Length (amino acid): 351
Reference: Eitinger et al. 1991; Pubmed- 1847142, Wolfram et al. 1995; Pubmed- 7896709
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Similar resistance genes in 'BacMet Predicted database' |
hpcopA | BacMet ID: BAC0617Code for: Enzyme
Family: Cation transport ATPase (P-type) family, Type IB subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Helicobacter pylori (Campylobacter pylori)Location: Chromosome
Compound: Copper (Cu)Description: Involved in copper export.
Length (amino acid): 745
Reference: Ge et al. 1995; Pubmed- 7752900, Ge et al. 1996; Pubmed- 8961555
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Similar resistance genes in 'BacMet Predicted database' |
hpcopP | BacMet ID: BAC0618Code for: Enzyme
Family: Contains Heavy-matal-associated (HMA) domainSequence: FASTA
Cross-database IDs: Link
Organism: Helicobacter pylori (Campylobacter pylori)Location: Chromosome
Compound: Copper (Cu)Description: Copper ion-binding protein. Part of a cation-transporting system which is associated with copper export out of the H.pylori cells.
Length (amino acid): 66
Reference: Ge et al. 1995; Pubmed- 7752900, Ge et al. 1996; Pubmed- 8961555
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Similar resistance genes in 'BacMet Predicted database' |
hsmR | BacMet ID: BAC0192Code for: Efflux
Family: SMR superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)Location: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)]Description: Small multidrug export protein HsmR
Length (amino acid): 112
Reference: Ninio et al. 2003; Pubmed- 12551892
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Similar resistance genes in 'BacMet Predicted database' |
hupE | BacMet ID: BAC0483Code for: Enzyme
Family: HupE/UreJ familySequence: FASTA
Cross-database IDs: Link
Organism: Rhizobium leguminosarum bv. ViciaeLocation: Plasmid pSym (Rhizobium leguminosarum bv. viciae)
Compound: Nickel (Ni)Description: It is a metal permease. hupE gene, part of a highly conserved hup cluster and evolutionarily related to hydrogenase genes. It has a potential role as a nickel permease. It encodes a nickel transporter required for hydrogenase activity.
Length (amino acid): 191
Reference: Brito et al. 2010; Pubmed- 20023036
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Similar resistance genes in 'BacMet Predicted database' |
hupE2 | BacMet ID: BAC0484Code for: Enzyme
Family: HupE/UreJ familySequence: FASTA
Cross-database IDs: Link
Organism: Rhizobium leguminosarum bv. viciae UPM791Location: Plasmid pRLUPM791b (Rhizobium leguminosarum bv. viciae UPM791b)
Compound: Nickel (Ni)Description: A hupE-homolog. It is a metal permease. There is a low level of amino acid sequence identity between hupE and hupE2. It is involved in hydrogen oxidation in R. leguminosarum bv. Viciae.
Length (amino acid): 199
Reference: Brito et al. 2010; Pubmed- 20023036
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Similar resistance genes in 'BacMet Predicted database' |
hupN | BacMet ID: BAC0193Code for: Enzyme
Family: HupF/HypC familySequence: FASTA
Cross-database IDs: Link
Organism: Azotobacter chroococcum mcd 1Location: Chromosome
Compound: Nickel (Ni)Description: Hydrogenase nickel incorporation protein HupN
Length (amino acid): 108
Reference: Fu et al. 1994; Pubmed- 8197192
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Similar resistance genes in 'BacMet Predicted database' |
ibpA | BacMet ID: BAC0194Code for: Heat shock protein
Family: Small heat shock protein (HSP20)Sequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Hydrogen Peroxide (H2O2) [class: Peroxides]Description: Small heat shock protein IbpA; Associates with aggregated proteins, together with IbpB, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; Its activity is ATP-independent
Length (amino acid): 137
Reference: Kitagawa et al. 2000; Pubmed- 10713416
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Similar resistance genes in 'BacMet Predicted database' |
ibpB | BacMet ID: BAC0195Code for: Heat shock protein
Family: Small heat shock protein (HSP20)Sequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Hydrogen Peroxide (H2O2) [class: Peroxides]Description: Small heat shock protein IbpA; Associates with aggregated proteins, together with IbpA, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress. Its activity is ATP-independent.
Length (amino acid): 142
Reference: Kitagawa et al. 2000; Pubmed- 10713416
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Similar resistance genes in 'BacMet Predicted database' |
iclR | BacMet ID: BAC0196Code for: Regulator
Family: Contains 1 HTH iclR-type DNA-binding domain, 1 iclR-ED (iclR effector binding) domainSequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Sodium acetate [class: Acetate]Description: Acetate operon repressor; Regulation of the glyoxylate bypass operon (aceBAK), which encodes isocitrate lyase, malate synthase as well as isocitrate dehydrogenase kinase/phosphorylase. Glyoxylate disrupts the interaction with the promoter by favoring the inactive dimeric form. Pyruvate enhances promoter binding by stabilizing the tetrameric form.
Length (amino acid): 274
Reference: Spencer et al. 2007; Pubmed- 17238290, Sunnarborg et al. 1990; Pubmed- 2185227
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Similar resistance genes in 'BacMet Predicted database' |
ideR | BacMet ID: BAC0498Code for: Regulator
Family: Contains 1 HTH dtxR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Mycobacterium tuberculosisLocation: Chromosome
Compound: Iron (Fe), Hydrogen Peroxide (H2O2) [class: Peroxides], Plumbagin [class: Naphthoquinone]Description: Metal-dependent DNA-binding protein that controls transcription of many genes involved in iron metabolism. Acts as a repressor of siderophore biosynthesis and as a Positive modulator of iron storage. Also regulates expression of transporters, proteins involved in siderophore synthesis, iron storage and transcriptional regulators. Has a role in oxidative streee tolerance.
Length (amino acid): 230
Reference: Rodriguez et al. 2002; Pubmed- 12065475
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Similar resistance genes in 'BacMet Predicted database' |
irlR | BacMet ID: BAC0197Code for: Regulator
Family: Contains 1 response regulatory domainSequence: FASTA
Cross-database IDs: Link
Organism: Burkholderia pseudomallei (strain K96243)Location: Chromosome
Compound: Cadmium (Cd), Zinc (Zn)Description: Transcriptional activator protein IrlR; Member of the two-component regulatory system IrlR/IrlS. May be involved in invasion of eukaryotic cells and heavy-metal resistance
Length (amino acid): 229
Reference: Jones et al. 1997; Pubmed- 9393784
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Similar resistance genes in 'BacMet Predicted database' |
irlS | BacMet ID: BAC0198Code for: Regulator
Family: Contains 1 histidine kinase domain, 1 HAMP domainSequence: FASTA
Cross-database IDs: Link
Organism: Burkholderia pseudomallei (strain K96243)Location: Chromosome
Compound: Cadmium (Cd), Zinc (Zn)Description: Sensor protein IrlS; Member of the two-component regulatory system IrlR/IrlS. May be involved in invasion of eukaryotic cells and heavy-metal resistance. Probably activates IrlR by phosphorylation.
Length (amino acid): 464
Reference: Jones et al. 1997; Pubmed- 9393784
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Similar resistance genes in 'BacMet Predicted database' |
kdeA | BacMet ID: BAC0491Code for: Efflux
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Klebsiella pneumoniae (strain MGH 78578)Location: Chromosome
Compound: Acriflavine [class: Acridine], Ethidium Bromide [class: Phenanthridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate]Description: It can confer resistance to antibiotics such as chloramphenicol, Kanamycin, norfloxacin, puromycin, daunomycin etc.
Length (amino acid): 410
Reference: Ping et al. 2007; Pubmed- 17917272
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Similar resistance genes in 'BacMet Predicted database' |
kexD | BacMet ID: BAC0492Code for: Effflux
Family: Restriction Nodulation Division (RND) superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Klebsiella pneumoniaeLocation: Chromosome
Compound: Rhodamine 6G [class: Xanthene], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid] Description: KexD was shown to function with AcrAEc and TolC from E. coli and AcrAKp and KocC from K. pneumoniae, like AcrD from E. coli
Length (amino acid): 1038
Reference: Ogawa et al. 2012; Pubmed- 22391093
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Similar resistance genes in 'BacMet Predicted database' |
klaB/telA/kilB | BacMet ID: BAC0199Code for: Unknown
Family: TelA familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coliLocation: Plasmid IncP-alpha RK2 (E. coli), Plasmid pBS228 (Pseudomonas aeruginosa)
Compound: Tellurium (Te)Description: Protein KlaB; Belongs to the kla operon, which is associated with cryptic tellurite resistance, and IncW plasmid fertility inhibition.
Length (amino acid): 378
Reference: Goncharoff et al. 1991; Pubmed- 2045366
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Similar resistance genes in 'BacMet Predicted database' |
klaC/telB | BacMet ID: BAC0200Code for: Unknown
Family: TrbC/VIRB2 familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coliLocation: Plasmid IncP-alpha RK2 (E. coli), Plasmid pBS228 (Pseudomonas aeruginosa)
Compound: Tellurium (Te)Description: Protein KlaC; Belongs to the kla operon, which is associated with cryptic tellurite resistance, and IncW plasmid fertility inhibition.
Length (amino acid): 317
Reference: Goncharoff et al. 1991; Pubmed- 2045366
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Similar resistance genes in 'BacMet Predicted database' |
kmrA | BacMet ID: BAC0493Code for: Efflux
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Klebsiella pneumoniaeLocation: Chromosome
Compound: Acriflavine [class: Acridine], 4,6-diamidino-2-phenylindole (DAPI) [class: Diamindine], Hoechst 33342 [class: Bisbenzimide], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Methyl Viologen [class: Paraquat], Ethidium Bromide [class: Phenanthridine], Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)]Description: It can confer resistance to Antibiotics such as kanamycin, gentamycin, erythromycin etc.
Length (amino acid): 499
Reference: Ogawa et al. 2006; Pubmed- 16508165
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Similar resistance genes in 'BacMet Predicted database' |
kmtR | BacMet ID: BAC0201Code for: Regulator
Family: Contains 1 HTH arsR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Mycobacterium tuberculosisLocation: Chromosome
Compound: Nickel (Ni), Cobalt (Co)Description: HTH-type transcriptional regulator KmtR; response to cobalt and nickel ions; Negatively auto-regulated
Length (amino acid): 130
Reference: Campbell et al. 2007; Pubmed- 17726022
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Similar resistance genes in 'BacMet Predicted database' |
kpnE | BacMet ID: BAC0476Code for: Efflux
Family: Small multidrug resistance (SMR) familySequence: FASTA
Cross-database IDs: Link
Organism: Klebsiella pneumoniae NTUH-K2044Location: Chromosome
Compound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Deoxycholate (SDC) [class: Acid], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Triclosan [class: Phenolic compounds], Methyl Viologen [class: Paraquat], Hydrogen Peroxide (H2O2) [class: Peroxides]Description: KpnEF is a EbrAB homolog. kpnEF is involved in oxidative stress tolerance, nitrosative stress tolerance, heat stress tolerance, osmotic stress toerance etc. in Klebsiella pneumoniae. It can confer resistance to antibiotics such as cefepime, ceftriaxone, colistin, erythromycin, rifamycin, tetracycline and streptomycin.
Length (amino acid): 120
Reference: Srinivasan et al. 2013; Pubmed- 23836167
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Similar resistance genes in 'BacMet Predicted database' |
kpnF | BacMet ID: BAC0477Code for: Efflux
Family: Small multidrug resistance (SMR) familySequence: FASTA
Cross-database IDs: Link
Organism: Klebsiella pneumoniae NTUH-K2044Location: Chromosome
Compound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Deoxycholate (SDC) [class: Acid], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Triclosan [class: Phenolic compounds], Methyl Viologen [class: Paraquat], Hydrogen Peroxide (H2O2) [class: Peroxides]Description: KpnEF is a EbrAB homolog. kpnEF is involved in oxidative stress tolerance, nitrosative stress tolerance, heat stress tolerance, osmotic stress toerance etc. in Klebsiella pneumoniae. It can confer resistance to antibiotics such as cefepime, ceftriaxone, colistin, erythromycin, rifamycin, tetracycline and streptomycin
Length (amino acid): 109
Reference: Srinivasan et al. 2013; Pubmed- 23836167
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Similar resistance genes in 'BacMet Predicted database' |
kpnO | BacMet ID: BAC0529Code for: Porin
Family: RND superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Klebsiella pneumoniae NTUH-K2044Location: Chromosome
Compound: Hydrogen Peroxide (H2O2) [class: Peroxides], Carbonyl cyanide 3-chlorophenylhydrazone (CCCP) [class: Hydrazone], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Sodium Nitrite (NaNo2) [class: Nitrites]Description: KpnO codes for a outer membrane porin. kpnO mediates antibiotic resistance via efflux mechanism and contributes towards disinfectant tolerance. It has a role in oxidative stress tolerance and nitrostative stress tolernace. KpnO also contributes to growth and gastrointestinal stress tolerance in K. pneumoniae.
Length (amino acid): 365
Reference: Srinivasan et al. 2012; Pubmed- 22848515
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Similar resistance genes in 'BacMet Predicted database' |
lde | BacMet ID: BAC0202Code for: Efflux
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Listeria monocytogenesLocation: Chromosome
Compound: Acridine Orange [class: Acridine], Ethidium Bromide [class: Phenanthridine]Description: Efflux pump Lde
Length (amino acid): 402
Reference: Godreuil et al. 2003; Pubmed- 12543681
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Similar resistance genes in 'BacMet Predicted database' |
lmrS | BacMet ID: BAC0535Code for: Efflux
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Staphylococcus aureus subsp. aureus COLLocation: Chromosome
Compound: Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Ethidium Bromide [class: Phenanthridine], Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)]Description: LmrS is an efflux protein capable of extruding multiple and structurally unrelated antimicrobial compounds. It can confer resistance to antobiotics such as linezolid, trimethoprim, chloramphenicol etc.
Length (amino acid): 480
Reference: Floyd et al 2010; Pubmed- 20855745
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Similar resistance genes in 'BacMet Predicted database' |
marA | BacMet ID: BAC0560Code for: Regulator
Family: Contains 1 HTH araC/xylS-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Cyclohexane [class: Cycloalkane], Diphenyl Ether [class: Phenyl], n-hexane [class: Alkane]Description: A transcriptional activator (MarA) of genes involved in the multiple antibiotic resistance (Mar) phenotype. It can also activate genes such as sodA, zwf and micF. Organic solvent tolerance and antibiotic resistance increased by overexpression of marA in Escherichia coli. High copy number of MarA and MarR also increases the tolerance level of bacteria to organic solvents.
Length (amino acid): 127
Reference: Asako et al. 1997; Pubmed- 9097440
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Similar resistance genes in 'BacMet Predicted database' |
marR | BacMet ID: BAC0561Code for: Regulator
Family: Contains 1 HTH marR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Cyclohexane [class: Cycloalkane], Diphenyl Ether [class: Phenyl], n-hexane [class: Alkane]Description: Multiple antibiotic resistance protein MarR; Repressor of the marRAB operon which is involved in the activation of both antibiotic resistance and oxidative stress genes. Binds to the marO operator/promoter site. Overexpression of MarR decreases organic solvent tolerance in E. coli. High copy number of MarA and MarR also increases the tolerance level of bacteria to organic solvents.
Length (amino acid): 144
Reference: Asako et al. 1997; Pubmed- 9097440
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Similar resistance genes in 'BacMet Predicted database' |
mco | BacMet ID: BAC0205Code for: Enzyme
Family: Multicopper oxidase (mco) familySequence: FASTA
Cross-database IDs: Link
Organism: Staphylococcus aureusLocation: Chromosome
Compound: Copper (Cu), Cobalt (Co)Description: Multicopper oxidase Mco; Involved in copper homeostasis and oxidative stress response. Oxidizes the substrate 3,3'-dimethoxybenzidine in vitro. Also possesses low levels of phenoloxidase and ferroxidase activities. A transposon-induced mutant showed copper and cobalt sensitivity and H2O2 tolerance.
Length (amino acid): 447
Reference: Sitthisak et al. 2005; Pubmed- 16151171
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Similar resistance genes in 'BacMet Predicted database' |
mctB | BacMet ID: BAC0206Code for: Efflux
Family: MctB familySequence: FASTA
Cross-database IDs: Link
Organism: Mycobacterium tuberculosisLocation: Chromosome
Compound: Copper (Cu)Description: Pore-forming protein MctB, which is involved in efflux of copper across the outer membrane. Essential for copper resistance and maintenance of a low intracellular copper concentration. Required for virulence.
Length (amino acid): 314
Reference: Wolschendorf et al. 2010; Pubmed- 21205886
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Similar resistance genes in 'BacMet Predicted database' |
mdeA | BacMet ID: BAC0207Code for: Enzyme
Family: Trans-sulfuration enzymes familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putida (Arthrobacter siderocapsulatus)Location: Chromosome
Compound: Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Hoechst 33342 [class: Bisbenzimide], Ethidium Bromide [class: Phenanthridine], Rhodamine 6G [class: Xanthene], Acriflavine [class: Acridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Crystal Violet [class: Triarylmethane], Dequalinium [class: Quaternary Ammonium Compounds (QACs)], Pentamidine [class: Diamidine], Pyronin Y [class: Xanthene]Description: Methionine gamma-lyase (MdeA)
Length (amino acid): 398
Reference: Huang et al. 2004; Pubmed- 14982783, Yamada et al. 2006; Pubmed- 16595922, Huet et al. 2008; Pubmed- 18832320
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Similar resistance genes in 'BacMet Predicted database' |
mdfA/cmr | BacMet ID: BAC0208Code for: Effux
Family: Major facilitator Superfamily (MdfA family)Sequence: FASTA
Cross-database IDs: Link
Organism: Only gram -ve, E. coli (Strain K12)Location: Chromosome
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Sodium Hydroxide (NaOH) [class: Base], Rhodamine 6G [class: Xanthene]Description: Multidrug transporter MdfA, Efflux pump driven by the proton motive force. Confers resistance to a broad spectrum of chemically unrelated drugs. Confers resistance to a diverse group of cationic or zwitterionic lipophilic compounds such as ethidium bromide, tetraphenylphosphonium, rhodamine, daunomycin, benzylkonium, rifampicin, tetracycline, puromycin, and to chemically unrelated, clinically important antibiotics such as chloramphenicol, erythromycin, and certain aminoglycosides and fluoroquinolones. OverExpression results in isopropyl-beta-D-thiogalactopyranoside (IPTG) exclusion and spectinomycin sensitivity. Transport of neutral substrates is electrogenic, whereas transport of cationic substrates is electroneutral. In addition to its role in multidrug resistance, confers extreme alkaline pH resistance, allowing the growth under conditions that are close to those used normally by alkaliphiles. This activity requires Na+ or K+; also known as Chloramphenicol resistance pump Cmr
Length (amino acid): 410
Reference: Edgar et al. 1997; Pubmed- 9079913, Nishino et al. 2001; Pubmed- 11566977, Sulavik et al 2001; Pubmed- 11257026
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Similar resistance genes in 'BacMet Predicted database' |
mdrL/yfmO | BacMet ID: BAC0209Code for: Efflux
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Listeria monocytogenesLocation: Chromosome
Compound: Zinc (Zn), Cobalt (Cobalt), Chromium (Cr), Ethidium Bromide [class: Phenanthridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)]Description: Multidrug resistance transporter mdrL/YfmO. It can confer resistance to antibiotics such as erythromycin, josamycin, clindamycin etc.
Length (amino acid): 397
Reference: Mata et al. 2000; Pubmed- 10856655
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Similar resistance genes in 'BacMet Predicted database' |
mdtA | BacMet ID: BAC0645Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Salmonella enterica serovar TyphimuriumLocation: Chromosome
Compound: Zinc (Zn)Description: Multidrug resistance protein MdtA. Part of a tripartite efflux system composed of MdtA, MdtB and MdtC. MdtB forms a heteromultimer with MdtC. MdtABC multidrug efflux systems has a role in metal resistance.
Length (amino acid): 413
Reference: Nishino et al. 2007; Pubmed- 17933888
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Similar resistance genes in 'BacMet Predicted database' |
mdtA/yegM | BacMet ID: BAC0210Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Sodium Deoxycholate (SDC) [class: Acid]Description: Multidrug resistance protein MdtA; The MdtABC tripartite complex confers resistance against novobiocin and deoxycholate; MdtABC requires TolC for its function
Length (amino acid): 415
Reference: Baranova et al. 2002; Pubmed- 12107134,
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Similar resistance genes in 'BacMet Predicted database' |
mdtB | BacMet ID: BAC0646Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Salmonella enterica serovar TyphimuriumLocation: Chromosome
Compound: Zinc (Zn)Description: Multidrug resistance protein MdtB. Part of a tripartite efflux system composed of MdtA, MdtB and MdtC. MdtB forms a heteromultimer with MdtC. MdtABC multidrug efflux systems has a role in metal resistance.
Length (amino acid): 1040
Reference: Nishino et al. 2007; Pubmed- 17933888
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Similar resistance genes in 'BacMet Predicted database' |
mdtB/yegN | BacMet ID: BAC0211Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Sodium Deoxycholate (SDC) [class: Acid], Hydrochloric acid (HCl) [class: Acid]Description: Multidrug resistance protein MdtB; The MdtABC tripartite complex confers resistance against novobiocin and deoxycholate. MdtABC requires TolC for its function.
Length (amino acid): 1040
Reference: Deininger et al. 2011; Pubmed- 21541325
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Similar resistance genes in 'BacMet Predicted database' |
mdtC | BacMet ID: BAC0647Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Salmonella enterica serovar TyphimuriumLocation: Chromosome
Compound: Zinc (Zn)Description: Multidrug resistance protein MdtC. Part of a tripartite efflux system composed of MdtA, MdtB and MdtC. MdtB forms a heteromultimer with MdtC. MdtABC multidrug efflux systems has a role in metal resistance.
Length (amino acid): 1026
Reference: Nishino et al. 2007; Pubmed- 17933888
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Similar resistance genes in 'BacMet Predicted database' |
mdtC/yegO | BacMet ID: BAC0212Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Sodium Deoxycholate (SDC) [class: Acid]Description: Multidrug resistance protein MdtC; The MdtABC tripartite complex confers resistance against novobiocin and deoxycholate. MdABC requires TolC for its function.
Length (amino acid): 1025
Reference: Nishino et al. 2001; Pubmed- 11566977, Nagakubo et al. 2002; Pubmed- 12107133
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Similar resistance genes in 'BacMet Predicted database' |
mdtE/yhiU | BacMet ID: BAC0213Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Crystal Violet [class: Triarylmethane], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Sodium Deoxycholate (SDC) [class: Acid], Rhodamine 6G [class: Xanthene], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)]Description: Multidrug resistance protein MdtE; Part of a multidrug resistance efflux system (mdtEF-TolC) that confers resistance to compounds such as rhodamine 6G, erythromycin, doxorubicin, ethidium bromide, TPP, SDS, deoxycholate, crystal violet and benzylkonium. Part of a tripartite efflux system composed of MdtE, MdtF and TolC. It has a role in biofilm formation of E. coli K12.
Length (amino acid): 385
Reference: Masuda et al. 2002; Pubmed- 12399493
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Similar resistance genes in 'BacMet Predicted database' |
mdtF/yhiV | BacMet ID: BAC0214Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Crystal Violet [class: Triarylmethane], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Sodium Deoxycholate (SDC) [class: Acid], Rhodamine 6G [class: Xanthene], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)]Description: Multidrug resistance protein MdtF; Part of a multidrug resistance efflux system that confers resistance to compounds such as rhodamine 6G, erythromycin, doxorubicin, ethidium bromide, TPP, SDS, deoxycholate, crystal violet and benzylkonium. Part of a tripartite efflux system composed of MdtE, MdtF and TolC.
Length (amino acid): 1037
Reference: Masuda et al. 2002; Pubmed- 12399493
|
Similar resistance genes in 'BacMet Predicted database' |
mdtG/yceE | BacMet ID: BAC0215Code for: Membrane Transporter
Family: MFS superfamily, DHA1 family, MdtG subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Sodium Deoxycholate (SDC) [class: Acid]Description: Multidrug resistance protein MdtG; Confers resistance to fosfomycin and deoxycholate
Length (amino acid): 408
Reference: Nishino et al. 2001; Pubmed- 11566977
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Similar resistance genes in 'BacMet Predicted database' |
mdtI/ydgE | BacMet ID: BAC0216Code for: Enzyme
Family: SMR superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Sodium Deoxycholate (SDC) [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Spermidine [class: Polyamines]Description: Spermidine export protein MdtI; Catalyzes the excretion of spermidine. Can also confer resistance to deoxycholate and SDS
Length (amino acid): 109
Reference: Nishino et al. 2001; Pubmed- 11566977, Higashi et al. 2008; Pubmed- 18039771
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Similar resistance genes in 'BacMet Predicted database' |
mdtJ/ebrB/ydgF | BacMet ID: BAC0217Code for: Enzyme
Family: SMR superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Shigella sonnei (strain Ss046)Location: Chromosome
Compound: Spermidine [class: Polyamines]Description: Spermidine export protein MdtJ; Catalyzes the excretion of spermidine
Length (amino acid): 121
Reference: Nishino et al. 2001; Pubmed- 11566977, Higashi et al. 2008; Pubmed- 18039771
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Similar resistance genes in 'BacMet Predicted database' |
mdtK/ydhE | BacMet ID: BAC0218Code for: Efflux
Family: MATE family, MdtK subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Sodium Deoxycholate (SDC) [class: Acid], Ethidium Bromide [class: Phenanthridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Acriflavine [class: Acridine]Description: Multidrug resistance protein MdtK; It functions as a Na+/drug antiporter. Confers resistance to many drugs such as fluoroquinolones (norfloxacin, ciprofloxacin, enoxacin), tetraphenylphosphonium ion (TPP), deoxycholate, doxorubicin, trimethoprim, chloramphenicol, fosfomycin, Acriflavine, ethidium bromide and benzylkonium
Length (amino acid): 457
Reference: Nishino et al. 2001; Pubmed- 11566977
|
Similar resistance genes in 'BacMet Predicted database' |
mdtM/yjiO | BacMet ID: BAC0219Code for: Efflux
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Tetraphenylarsonium (TPA) [class: Quaternary Ammonium Compounds (QACs)]Description: Multidrug resistance protein MdtM; Confers resistance to Acriflavine, chloramphenicol, norfloxacin, ethidium bromide and TPP, tetraphenylarsonium chloride ; part of a tripartite efflux system composed of MdtN, MdtO and MdtP
Length (amino acid): 410
Reference: Nishino et al. 2001; Pubmed- 11566977
|
Similar resistance genes in 'BacMet Predicted database' |
mdtN/yjcR | BacMet ID: BAC0220Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Acriflavine [class: Acridine], Tetraphenylarsonium (TPA) [class: Quaternary Ammonium Compounds (QACs)]Description: Multidrug resistance protein MdtN; Involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride; Could be part of a tripartite efflux system composed of MdtN, MdtO and MdtP
Length (amino acid): 343
Reference: Nishino et al. 2001; Pubmed- 11566977
|
Similar resistance genes in 'BacMet Predicted database' |
mepA | BacMet ID: BAC0221Code for: Efflux
Family: Multi antimicrobial extrusion (MATE) family (MepA subfamily)Sequence: FASTA
Cross-database IDs: Link
Organism: Only gram +ve, Staphylococcus aureusLocation: Chromosome
Compound: Chlorhexidine [class: Biguanides], Ethidium Bromide [class: Phenanthridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Acriflavine [class: Acridine], Rhodamine 6G [class: Xanthene], Dequalinium [class: Quaternary Ammonium Compounds (QACs)], Pentadiamine [class: Diamidine], Trimethylamine-diphenylhexatriene (TMA-DPH) [class: Diphenylhexatriene], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Crystal Violet [class: Triarylmethane], Pyronin Y [class: Xanthene]Description: Multidrug Export protein, Multidrug resistance efflux protein By similarity. Contributes to resistance to the glycylcycline antibiotic tigecycline, ciprofloxacin, norfloxacin etc.
Length (amino acid): 451
Reference: McAleese et al. 2005; Pubmed- 15855508, Kaatz et al. 2005; Pubmed- 15855507, Huet et al. 2008; Pubmed- 18832320
|
Similar resistance genes in 'BacMet Predicted database' |
mepB | BacMet ID: BAC0222Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putidaLocation: Chromosome
Compound: Toluene [class: Aromatic hydrocarbons], n-hexane [class: Alkane]Description: Multidrug/solvent efflux pump membrane transporter MepB; the inner membrane transporter component of an organic solvent and antibiotic efflux pump; confers resistance to toluene, hexane, p-xylene, ampicillin, penicillin G, erythromycin, novobiocin and tetracycline.
Length (amino acid): 1050
Reference: Fukumori et al. 1998; Pubmed- 9827328
|
Similar resistance genes in 'BacMet Predicted database' |
mepC | BacMet ID: BAC0223Code for: Efflux
Family: RND Superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putidaLocation: Chromosome
Compound: Toluene [class: Aromatic hydrocarbons] [class: Aromatic hydrocarbons], n-hexane [class: Alkane]Description: Multidrug/solvent efflux pump outer membrane protein MepC; the outer membrane component of an organic solvent and antibiotic efflux pump; confers resistance to toluene, hexane, p-xylene, ampicillin, penicillin G, erythromycin, novobiocin and tetracycline.
Length (amino acid): 484
Reference: Fukumori et al. 1998; Pubmed- 9827328
|
Similar resistance genes in 'BacMet Predicted database' |
merA | BacMet ID: BAC0224Code for: Enzyme
Family: Class-I pyridine nucleotide-disulfide oxidoreductase familySequence: FASTA
Cross-database IDs: Link
Organism: Bacillus cereus R6007Location: Chromosome
Compound: Mercury (Hg), Phenylmercury Acetate [class: Organo-mercury]Description: Mercury reductase enzyme, merA; resistance to Hg2+ in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg0.
Length (amino acid): 631
Reference: Gupta et al. 1999; Pubmed- 10559175
|
Similar resistance genes in 'BacMet Predicted database' |
merA | BacMet ID: BAC0648Code for: Enzyme
Family: Class-I pyridine nucleotide-disulfide oxidoreductase familySequence: FASTA
Cross-database IDs: Link
Organism: Serratia marcescensLocation: Plasmid pDU1358
Compound: Mercury (Hg), Phenylmercury Acetate [class: Organo-mercury]Description: Mercury reductase enzyme, merA; resistance to Hg2+ in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg0.
Length (amino acid): 460
Reference: Griffin et al. 1987; Pubmed- 3033633
|
Similar resistance genes in 'BacMet Predicted database' |
merA | BacMet ID: BAC0649Code for: Enzyme
Family: Class-I pyridine nucleotide-disulfide oxidoreductase familySequence: FASTA
Cross-database IDs: Link
Organism: Tenacibaculum discolor 9A5Location: Chromosome
Compound: Mercury (Hg)Description: Mercury reductase enzyme, merA; resistance to Hg2+ in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg0.
Length (amino acid): 568
Reference: Allen et al. 2013; Pubmed- 22816663
|
Similar resistance genes in 'BacMet Predicted database' |
merA | BacMet ID: BAC0650Code for: Enzyme
Family: Class-I pyridine nucleotide-disulfide oxidoreductase familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas sp. K-62Location: Plasmid pMR26
Compound: Mercury (Hg), Phenylmercury Acetate [class: Organo-mercury], Methylmercury Acetate [class: Organo-mercury]Description: Mercury reductase enzyme, merA; resistance to Hg2+ in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg0.
Length (amino acid): 569
Reference: Kiyono et al. 1997; Pubmed- 9168120
|
Similar resistance genes in 'BacMet Predicted database' |
merA | BacMet ID: BAC0651Code for: Enzyme
Family: Class-I pyridine nucleotide-disulfide oxidoreductase familySequence: FASTA
Cross-database IDs: Link
Organism: Staphylococcus aureusLocation: Plasmid pI258
Compound: Mercury (Hg)Description: Mercury reductase enzyme, merA; resistance to Hg2+ in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg0.
Length (amino acid): 547
Reference: Babich et al. 1991; Pubmed- 1954576, Laddaga et al. 1987; Pubmed- 3037534
|
Similar resistance genes in 'BacMet Predicted database' |
merA | BacMet ID: BAC0652Code for: Enzyme
Family: Class-I pyridine nucleotide-disulfide oxidoreductase familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas stutzeriLocation: Plasmid pPB
Compound: Mercury (Hg)Description: Mercury reductase enzyme, merA; resistance to Hg2+ in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg0.
Length (amino acid): 561
Reference: Reniero et al. 1995; Pubmed- 8529897, Reniero et al. 1998; Pubmed- 9479042
|
Similar resistance genes in 'BacMet Predicted database' |
merA | BacMet ID: BAC0653Code for: Enzyme
Family: Class-I pyridine nucleotide-disulfide oxidoreductase familySequence: FASTA
Cross-database IDs: Link
Organism: Thiobacillus ferrooxidansLocation: Chromosome, Transposon Tn5037
Compound: Mercury (Hg)Description: Mercury reductase enzyme, merA; resistance to Hg2+ in bacteria appears to be governed by a specialized system which includes mercuric reductase. MerA protein is responsible for volatilizing mercury as Hg0.
Length (amino acid): 562
Reference: Kalyaeva et al. 2001; Pubmed- 11642118
|
Similar resistance genes in 'BacMet Predicted database' |
merB | BacMet ID: BAC0657Code for: Enzyme
Family: MerB familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas sp. K-62Location: Plasmid pMR26
Compound: Mercury (Hg), Phenylmercury Acetate [class: Organo-mercury], Methylmercury Acetate [class: Organo-mercury]Description: MerB, encodes the enzyme organomercural lyase that breaks the carbon-mercury bond in toxic substrates such as phenymercury acetate; in gram negative it is rare, need for organomercural resistance.
Length (amino acid): 212
Reference: Kiyono et al. 1997; Pubmed- 9168120
|
Similar resistance genes in 'BacMet Predicted database' |
merB | BacMet ID: BAC0658Code for: Enzyme
Family: MerB familySequence: FASTA
Cross-database IDs: Link
Organism: Staphylococcus aureusLocation: plasmid pI258
Compound: Mercury (Hg), Phenylmercury Acetate [class: Organo-mercury]Description: Cleaves the carbon-mercury bond of organomercurials such as phenylmercuric acetate. One product is Hg2+, which is subsequently detoxified by the mercuric reductase.
Length (amino acid): 216
Reference: Babich et al. 1991; Pubmed- 1954576, Laddaga et al. 1987; Pubmed- 3037534
|
Similar resistance genes in 'BacMet Predicted database' |
merB | BacMet ID: BAC0659Code for: Enzyme
Family: MerB familySequence: FASTA
Cross-database IDs: Link
Organism: Serratia marcescensLocation: Plasmid pDU1358
Compound: Mercury (Hg), Phenylmercury Acetate [class: Organo-mercury]Description: Cleaves the carbon-mercury bond of organomercurials such as phenylmercuric acetate. One product is Hg2+, which is subsequently detoxified by the mercuric reductase.
Length (amino acid): 212
Reference: Griffin et al. 1987; Pubmed- 3033633,
|
Similar resistance genes in 'BacMet Predicted database' |
merB | BacMet ID: BAC0660Code for: Enzyme
Family: MerB familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas stutzeriLocation: Plasmid pPB
Compound: Mercury (Hg)Description: MerB, encodes the enzyme organomercural lyase that breaks the carbon-mercury bond in toxic substrates such as phenymercury acetate; in gram negative it is rare, need for organomercural resistance.
Length (amino acid): 219
Reference: Reniero et al. 1995; Pubmed- 8529897, Reniero et al. 1998; Pubmed- 9479042
|
Similar resistance genes in 'BacMet Predicted database' |
merB1 | BacMet ID: BAC0654Code for: Enzyme
Family: MerB familySequence: FASTA
Cross-database IDs: Link
Organism: Bacillus sp. (strain RC607)Location: Chromosome
Compound: Mercury (Hg), Phenylmercury Acetate [class: Organo-mercury]Description: MerB of the first mer operon. MerB1, encodes the enzyme organomercural lyase that breaks the carbon-mercury bond in toxic substrates such as phenymercury acetate; in gram negative it is rare, need for organomercural resistance.
Length (amino acid): 218
Reference: Gupta et al. 1999; Pubmed- 10559175
|
Similar resistance genes in 'BacMet Predicted database' |
merB1 | BacMet ID: BAC0663Code for: Enzyme
Family: MerB familySequence: FASTA
Cross-database IDs: Link
Organism: Bacillus megaterium MB1Location: Chromosome, Transposon TnMERI1
Compound: Mercury (Hg), Fluorescein mercuric acetate [class: Organo-mercury], p-chloro-mercuribenzoic acid [class: Organo-mercury], Phenylmercury Acetate [class: Organo-mercury]Description: Fragment of merB1. Organomercurial lyase merB (merB1) is part of the first mer operon of the transposon TnMERI1 of Bacillus megaterium MB1.
Length (amino acid): 214
Reference: Huang et al. 1999; Pubmed- 10548738
|
Similar resistance genes in 'BacMet Predicted database' |
merB2 | BacMet ID: BAC0655Code for: Enzyme
Family: MerB familySequence: FASTA
Cross-database IDs: Link
Organism: Bacillus sp. (strain RC607)Location: Chromosome
Compound: Mercury (Hg), Phenylmercury Acetate [class: Organo-mercury]Description: MerB of the second mer operon. MerB2, encodes the enzyme organomercural lyase that breaks the carbon-mercury bond in toxic substrates such as phenymercury acetate; in gram negative it is rare, need for organomercural resistance.
Length (amino acid): 209
Reference: Gupta et al. 1999; Pubmed- 10559175
|
Similar resistance genes in 'BacMet Predicted database' |
merB2 | BacMet ID: BAC0661Code for: Enzyme
Family: MerB familySequence: FASTA
Cross-database IDs: Link
Organism: Bacillus megaterium MB1Location: Chromosome, Transposon TnMERI1
Compound: Mercury (Hg), Fluorescein mercuric acetate [class: Organo-mercury], p-chloro-mercuribenzoic acid [class: Organo-mercury], Phenylmercury Acetate [class: Organo-mercury]Description: Organomercurial lyase merB (merB2) is part of the second mer operon of the transposon TnMERI1 of Bacillus megaterium MB1. This second MerB (MerB2: organomercurial lyse) contributes to confer resistance to a wide range of organomercuric compounds than presence of one merB.
Length (amino acid): 209
Reference: Huang et al. 1999; Pubmed- 10548738
|
Similar resistance genes in 'BacMet Predicted database' |
merB3 | BacMet ID: BAC0656Code for: Enzyme
Family: MerB familySequence: FASTA
Cross-database IDs: Link
Organism: Bacillus sp. (strain RC607)Location: Chromosome
Compound: Mercury (Hg), Phenylmercury Acetate [class: Organo-mercury]Description: MerB of the third mer operon. MerB3, encodes the enzyme organomercural lyase that breaks the carbon-mercury bond in toxic substrates such as phenymercury acetate; in gram negative it is rare, need for organomercural resistance.
Length (amino acid): 218
Reference: Gupta et al. 1999; Pubmed- 10559175
|
Similar resistance genes in 'BacMet Predicted database' |
merB3 | BacMet ID: BAC0662Code for: Enzyme
Family: MerB familySequence: FASTA
Cross-database IDs: Link
Organism: Bacillus megaterium MB1Location: Chromosome, Transposon TnMERI1
Compound: Mercury (Hg), Fluorescein mercuric acetate [class: Organo-mercury], p-chloro-mercuribenzoic acid [class: Organo-mercury], Phenylmercury Acetate [class: Organo-mercury], Thimerosal [class: Organo-mercury], Methylmercury chloride [class: Organo-mercury], Ethylmercury chloride [class: Organo-mercury]Description: Organomercurial lyase merB (merB2) is part of the second mer operon of the transposon TnMERI1 of Bacillus megaterium MB1. This third MerB (MerB3: organomercurial lyse) contributes to confer resistance to a wide range of organomercuric compounds than presence of one merB.
Length (amino acid): 242
Reference: Huang et al. 1999; Pubmed- 10548738
|
Similar resistance genes in 'BacMet Predicted database' |
merC | BacMet ID: BAC0664Code for: Membrane Transporter
Family: MerC familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas stutzeriLocation: Plasmid pPB
Compound: Mercury (Hg)Description: Mercuric resistance protein MerC. This protein is located in the inner membrane and mediates mercury transport into the cytoplasm.
Length (amino acid): 141
Reference: Reniero et al. 1995; Pubmed- 8529897, Reniero et al. 1998; Pubmed- 9479042
|
Similar resistance genes in 'BacMet Predicted database' |
merC | BacMet ID: BAC0226Code for: Membrane Transporter
Family: MerC familySequence: FASTA
Cross-database IDs: Link
Organism: Thiobacillus ferrooxidans (Acidithiobacillus ferrooxidans)Location: Chromosome
Compound: Mercury (Hg)Description: Mercuric resistance protein MerC; Occurs separately from mer operon; encodes for mercury transport system; This protein is located in the inner membrane and mediates mercury transport into the cytoplasm. Additional alternative to merT; commonly found in E. coli, missing in pseudomonas and other gram negative bacteria; found more often in brackish water than fresh water samples still less in marine environments.
Length (amino acid): 144
Reference: Inoue et al. 1990; Pubmed- 2265748, Wilson et al. 2000; Pubmed- 10781809, Salhman et al. 1997; Pubmed- 9368013
|
Similar resistance genes in 'BacMet Predicted database' |
merD | BacMet ID: BAC0665Code for: Regulator
Family: Contains 1 HTH merR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas stutzeriLocation: Plasmid pPB
Compound: Mercury (Hg)Description: Part of the first pPB mer operon.
Length (amino acid): 121
Reference: Reniero et al. 1995; Pubmed- 8529897, Reniero et al. 1998; Pubmed- 9479042
|
Similar resistance genes in 'BacMet Predicted database' |
merD | BacMet ID: BAC0666Code for: Regulator
Family: Contains 1 HTH merR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas stutzeriLocation: Plasmid pPB
Compound: Mercury (Hg)Description: Part of the second pPB mer operon.
Length (amino acid): 121
Reference: Reniero et al. 1995; Pubmed- 8529897, Reniero et al. 1998; Pubmed- 9479042
|
Similar resistance genes in 'BacMet Predicted database' |
merD | BacMet ID: BAC0227Code for: Regulator
Family: Contains 1 HTH merR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosaLocation: Plasmid pVS1
Compound: Mercury (Hg)Description: HTH-type transcriptional regulator ; most mer operon from gram negative ends up with merD gene; it encodes a secondary regulatory protein that binds to the same DNA site as merR; it can be considered as minor regulatory protein that down-regulates mer operon expression.
Length (amino acid): 121
Reference: Brown et al. 1986; Pubmed- 3007931
|
Similar resistance genes in 'BacMet Predicted database' |
merD | BacMet ID: BAC0667Code for: Regulator
Family: Contains 1 HTH merR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Serratia marcescensLocation: Plasmid pDU1358
Compound: Mercury (Hg)Description: HTH-type transcriptional regulator ; most mer operon from gram negative ends up with merD gene; it encodes a secondary regulatory protein that binds to the same DNA site as merR; it can be considered as minor regulatory protein that down-regulates mer operon expression.
Length (amino acid): 121
Reference: Mukhopadhyay et al. 1991; Pubmed- 1917975, Griffin et al. 1987; Pubmed- 3033633, Nucifora et al. 1989; Pubmed- 2691875
|
Similar resistance genes in 'BacMet Predicted database' |
merD | BacMet ID: BAC0668Code for: Regulator
Family: Contains 1 HTH merR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans CH34Location: Plasmid pMOL28, Plasmid pMOL30
Compound: Mercury (Hg)Description: HTH-type transcriptional regulator ; most mer operon from gram negative ends up with merD gene; it encodes a secondary regulatory protein that binds to the same DNA site as merR; it can be considered as minor regulatory protein that down-regulates mer operon expression.
Length (amino acid): 121
Reference: Champier et al. 2004; Pubmed- 15165248
|
Similar resistance genes in 'BacMet Predicted database' |
merD | BacMet ID: BAC0669Code for: Regulator
Family: Contains 1 HTH merR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas sp. K-62Location: Plasmid pMR26
Compound: Mercury (Hg)Description: HTH-type transcriptional regulator ; most mer operon from gram negative ends up with merD gene; it encodes a secondary regulatory protein that binds to the same DNA site as merR; it can be considered as minor regulatory protein that down-regulates mer operon expression.
Length (amino acid): 121
Reference: Kiyono et al. 1997; Pubmed- 9168120
|
Similar resistance genes in 'BacMet Predicted database' |
merE | BacMet ID: BAC0670Code for: Membrane Transporter
Family: MerE familySequence: FASTA
Cross-database IDs: Link
Organism: Serratia marcescensLocation: Plasmid pDU1358 (Serratia marcescens)
Compound: Mercury (Hg)Description: The prokaryotic MerE (or URF-1) protein is part of the mercury resistance operon. The protein is thought not to have any direct role in conferring mercury resistance to the organism but may be a mercury resistance transposon.
Length (amino acid): 78
Reference: Griffin et al. 1987; Pubmed- 3033633
|
Similar resistance genes in 'BacMet Predicted database' |
merE | BacMet ID: BAC0671Code for: Membrane Transporter
Family: MerE familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas stutzeriLocation: Plasmid pPB
Compound: Mercury (Hg)Description: Mercuric resistance protein MerE. Part of the first pPB mer operon.
Length (amino acid): 78
Reference: Reniero et al. 1995; Pubmed- 8529897, Reniero et al. 1998; Pubmed- 9479042
|
Similar resistance genes in 'BacMet Predicted database' |
merE | BacMet ID: BAC0672Code for: Membrane Transporter
Family: MerE familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas stutzeriLocation: Plasmid pPB
Compound: Mercury (Hg)Description: Mercuric resistance protein MerE. Part of the second pPB mer operon.
Length (amino acid): 78
Reference: Reniero et al. 1995; Pubmed- 8529897, Reniero et al. 1998; Pubmed- 9479042
|
Similar resistance genes in 'BacMet Predicted database' |
merE | BacMet ID: BAC0673Code for: Membrane Transporter
Family: MerE familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosaLocation: Plasmid pVS1
Compound: Mercury (Hg)Description: Mercuric resistance protein MerE.
Length (amino acid): 78
Reference: Brown et al. 1986; Pubmed- 3007931
|
Similar resistance genes in 'BacMet Predicted database' |
merF | BacMet ID: BAC0228Code for: Membrane Transporter
Family: MerF Transpoter familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas sp. CT14 Location: Plasmid pMER327/419 (Pseudomonas fluorescens), Plasmid pECL_A (Enterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCDC 279-56))
Compound: Mercury (Hg)Description: Mercuric resistance protein F; Additional alternative to merT.
Length (amino acid): 81
Reference: Wilson et al. 2000; Pubmed- 10781809
|
Similar resistance genes in 'BacMet Predicted database' |
merG | BacMet ID: BAC0229Code for: Membrane Transporter
Family: Contains 1 TPR-like helical , 1 Sel1-like repeatSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas sp. K-62Location: Plasmid pMR26 (Pseudomonas sp. K-62), Plasmid pIJB1 (Burkholderia cepacia (Pseudomonas cepacia))
Compound: Mercury (Hg), Phenylmercury Acetate [class: Organo-mercury]Description: Mercuric resistance protein MerG; Known to confer resistance to phenylmercury
Length (amino acid): 217
Reference: Kiyono et al. 1999; Pubmed- 9922233, Kiyono et al. 1997; Pubmed- 9168120,
|
Similar resistance genes in 'BacMet Predicted database' |
merH | BacMet ID: BAC0230Code for: Enzyme
Family: Mercuric Ion Transporter (Mer) superfamily. MerC familySequence: FASTA
Cross-database IDs: Link
Organism: Mycobacterium marinum (strain ATCC BAA-535 / M)Location: Plasmid pMM23 (Mycobacterium marinum), Plasmid pMAB (Mycobacterium abscessus (strain ATCC 19977 / DSM 44196))
Compound: Mercury (Hg)Description: Mercuric ion transport protein, MerH
Length (amino acid): 171
Reference: Schue et al. 2009; Pubmed- 18931130, Barkay et al. 2003; Pubmed- 12829275
|
Similar resistance genes in 'BacMet Predicted database' |
merP | BacMet ID: BAC0674Code for: Membrane Transporter
Family: Contains 1 HMA domainSequence: FASTA
Cross-database IDs: Link
Organism: Thiobacillus ferrooxidansLocation: Chromosome, Transposon Tn5037
Compound: Mercury (Hg)Description: Periplasmic mercuric ion binding protein.
Length (amino acid): 92
Reference: Kalyaeva et al. 2001; Pubmed- 11642118
|
Similar resistance genes in 'BacMet Predicted database' |
merP | BacMet ID: BAC0231Code for: Membrane Transporter
Family: Contains 1 HMA domainSequence: FASTA
Cross-database IDs: Link
Organism: Serratia marcescensLocation: Plasmid pDU1358 (Serratia marcescens)
Compound: Mercury (Hg)Description: Mercuric transport protein periplasmic component; hypersensitivity to the mercuric ions are associated with the merP gene; MerP does not act to transport Hg(II) directly. Mercury scavenger that specifically binds to one mercury ion and which passes it to the mercuric reductase (merA) via the merT protein.
Length (amino acid): 91
Reference: Hamlett et al. 1992; Pubmed- 1328156
|
Similar resistance genes in 'BacMet Predicted database' |
merP | BacMet ID: BAC0675Code for: Membrane Transporter
Family: Contains 1 HMA domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas sp. K-62Location: Plasmid pMR26 (Pseudomonas sp. K-62)
Compound: Mercury (Hg)Description: Mercury-binding protein. Mercuric transport protein periplasmic component.
Length (amino acid): 91
Reference: Kiyono et al. 1997; Pubmed- 9168120
|
Similar resistance genes in 'BacMet Predicted database' |
merP | BacMet ID: BAC0676Code for: Membrane Transporter
Family: Contains 1 HMA domainSequence: FASTA
Cross-database IDs: Link
Organism: Bacillus sp. (strain RC607)Location: Chromosome
Compound: Mercury (Hg)Description: Mercury-binding protein. Mercuric transport protein periplasmic component.
Length (amino acid): 116
Reference: Gupta et al. 1999; Pubmed- 10559175
|
Similar resistance genes in 'BacMet Predicted database' |
merP | BacMet ID: BAC0677Code for: Membrane Transporter
Family: Contains 1 HMA domainSequence: FASTA
Cross-database IDs: Link
Organism: Tenacibaculum discolor 9A5Location: Chromosome
Compound: Mercury (Hg)Description: Mercuric transport protein periplasmic component.
Length (amino acid): 113
Reference: Allen et al. 2013; Pubmed- 22816663
|
Similar resistance genes in 'BacMet Predicted database' |
merP | BacMet ID: BAC0678Code for: Membrane Transporter
Family: Contains 1 HMA domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas stutzeriLocation: Plasmid pPB
Compound: Mercury (Hg)Description: Part of the first pPB mer operon.
Length (amino acid): 91
Reference: Reniero et al. 1995; Pubmed- 8529897, Reniero et al. 1998; Pubmed- 9479042
|
Similar resistance genes in 'BacMet Predicted database' |
merP | BacMet ID: BAC0679Code for: Membrane Transporter
Family: Contains 1 HMA domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas stutzeriLocation: Plasmid pPB
Compound: Mercury (Hg)Description: Part of the second pPB mer operon.
Length (amino acid): 91
Reference: Reniero et al. 1995; Pubmed- 8529897, Reniero et al. 1998; Pubmed- 9479042
|
Similar resistance genes in 'BacMet Predicted database' |
merR | BacMet ID: BAC0680Code for: Regulator
Family: Contains 1 HTH merR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Staphylococcus aureusLocation: Plasmid pI258
Compound: Mercury (Hg)Description: Mediates the mercuric-dependent induction of mercury resistance operon. In the absence of mercury MerR represses transcription by binding tightly to the mer operator region; when mercury is present the dimeric complex binds a single ion and becomes a potent transcriptional activator, while remaining bound to the mer site.
Length (amino acid): 135
Reference: Laddaga et al. 1987; Pubmed- 3037534
|
Similar resistance genes in 'BacMet Predicted database' |
merR | BacMet ID: BAC0232Code for: Regulator
Family: Contains 1 HTH merR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosaLocation: Plasmid pVS1 (Pseudomonas aeruginosa)
Compound: Mercury (Hg)Description: Mercuric resistance operon regulatory gene whose product is a unique positively acting activator protein that twists and bends the operator DNA region in the presence of Hg++ allowing RNA polymerse to synthesize mRNA.
Length (amino acid): 144
Reference: Shewchuk et al. 1989; Pubmed- 2551364, Ni'Bhriain et al. 1983; Pubmed- 6307976
|
Similar resistance genes in 'BacMet Predicted database' |
merR | BacMet ID: BAC0685Code for: Regulator
Family: ArsR/Smt familySequence: FASTA
Cross-database IDs: Link
Organism: Tenacibaculum discolor 9A5Location: Chromosome
Compound: Mercury (Hg)Description: Mercuric resistance operon regulatory protein.
Length (amino acid): 124
Reference: Allen et al. 2013; Pubmed- 22816663
|
Similar resistance genes in 'BacMet Predicted database' |
merR | BacMet ID: BAC0686Code for: Regulator
Family: Contains 1 HTH merR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Serratia marcescensLocation: Plasmid pDU1358 (Serratia marcescens)
Compound: Mercury (Hg)Description: Mediates the mercuric-dependent induction of mercury resistance operon. In the absence of mercury MerR represses transcription by binding tightly to the mer operator region; when mercury is present the dimeric complex binds a single ion and becomes a potent transcriptional activator, while remaining bound to the mer site.
Length (amino acid): 144
Reference: Yu et al. 1994; Pubmed- 8195221, Nucifora et al. 1989; Pubmed- 2666393
|
Similar resistance genes in 'BacMet Predicted database' |
merR | BacMet ID: BAC0687Code for: Regulator
Family: Contains 1 HTH merR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas stutzeriLocation: Plasmid pPB
Compound: Mercury (Hg)Description: Mercuric resistance operon regulatory protein.
Length (amino acid): 144
Reference: Reniero et al. 1995; Pubmed- 8529897, Reniero et al. 1998; Pubmed- 9479042
|
Similar resistance genes in 'BacMet Predicted database' |
merR | BacMet ID: BAC0689Code for: Regulator
Family: Contains 1 HTH merR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Thiobacillus ferrooxidansLocation: Chromosome, Transposon Tn5037
Compound: Mercury (Hg)Description: Mercuric resistance operon regulatory protein.
Length (amino acid): 151
Reference: Kalyaeva et al. 2001; Pubmed- 11642118
|
Similar resistance genes in 'BacMet Predicted database' |
merR1 | BacMet ID: BAC0682Code for: Regulator
Family: Contains 1 HTH merR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Bacillus sp. (strain RC607)Location: Chromosome
Compound: Mercury (Hg)Description: Mercuric resistance operon regulatory protein.
Length (amino acid): 132
Reference: Helmann et al. 1989; Pubmed- 2492496
|
Similar resistance genes in 'BacMet Predicted database' |
merR1 | BacMet ID: BAC0683Code for: Regulator
Family: Contains 1 HTH merR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas sp. K-62Location: Plasmid pMR26 (Pseudomonas sp. K-62)
Compound: Mercury (Hg)Description: Mercuric resistance operon regulatory protein.
Length (amino acid): 144
Reference: Kiyono et al. 1997; Pubmed- 9168120
|
Similar resistance genes in 'BacMet Predicted database' |
merR2 | BacMet ID: BAC0681Code for: Regulator
Family: Contains 1 HTH merR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Bacillus sp. (strain RC607)Location: Chromosome
Compound: Mercury (Hg), Phenylmercury Acetate [class: Organo-mercury]Description: Mercury resistance operon negative regulator MerR2
Length (amino acid): 129
Reference: Gupta et al. 1999; Pubmed- 10559175
|
Similar resistance genes in 'BacMet Predicted database' |
merR2 | BacMet ID: BAC0684Code for: Regulator
Family: Contains 1 HTH merR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas sp. K-62Location: Plasmid pMR26 (Pseudomonas sp. K-62)
Compound: Mercury (Hg)Description: Mercuric resistance operon regulatory protein.
Length (amino acid): 144
Reference: Kiyono et al. 1997; Pubmed- 9168120, Kiyono et al. 1999; Pubmed- 10513611
|
Similar resistance genes in 'BacMet Predicted database' |
merR2 | BacMet ID: BAC0688Code for: Regulator
Family: Contains 1 HTH merR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas stutzeriLocation: Plasmid pPB
Compound: Mercury (Hg), Phenylmercury Acetate [class: Organo-mercury]Description: Organomercurial resistance regulatory protein.
Length (amino acid): 144
Reference: Reniero et al. 1995; Pubmed- 8529897, Reniero et al. 1998; Pubmed- 9479042
|
Similar resistance genes in 'BacMet Predicted database' |
merT | BacMet ID: BAC0690Code for: Membrane Transporter
Family: MerT familySequence: FASTA
Cross-database IDs: Link
Organism: Thiobacillus ferrooxidansLocation: Chromosome, Transposon Tn5037
Compound: Mercury (Hg)Description: Mercuric ion transport protein.
Length (amino acid): 116
Reference: Kalyaeva et al. 2001; Pubmed- 11642118
|
Similar resistance genes in 'BacMet Predicted database' |
merT | BacMet ID: BAC0691Code for: Membrane Transporter
Family: MerT familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas stutzeriLocation: Plasmid pPB
Compound: Mercury (Hg)Description: Part of the first pPB mer operon.
Length (amino acid): 116
Reference: Reniero et al. 1995; Pubmed- 8529897, Reniero et al. 1998; Pubmed- 9479042
|
Similar resistance genes in 'BacMet Predicted database' |
merT | BacMet ID: BAC0692Code for: Membrane Transporter
Family: MerT familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas stutzeriLocation: Plasmid pPB
Compound: Mercury (Hg)Description: Part of the second pPB mer operon.
Length (amino acid): 116
Reference: Reniero et al. 1995; Pubmed- 8529897, Reniero et al. 1998; Pubmed- 9479042
|
Similar resistance genes in 'BacMet Predicted database' |
merT | BacMet ID: BAC0693Code for: Membrane Transporter
Family: MerT familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas sp. K-62Location: Plasmid pMR26 (Pseudomonas sp. K-62)
Compound: Mercury (Hg)Description: Mercuric transport protein MerT; determines hyperaccumulation of Hg++ but not the CH3Hg+; Involved in mercuric transport. Passes a mercury ion from the periplasmic merP protein to the mercuric reductase (merA).
Length (amino acid): 116
Reference: Kiyono et al. 1997; Pubmed- 9168120
|
Similar resistance genes in 'BacMet Predicted database' |
merT | BacMet ID: BAC0233Code for: Membrane Transporter
Family: MerT familySequence: FASTA
Cross-database IDs: Link
Organism: Alcaligenes sp.Location: Plasmid IncHI2, pMER610 (Alcaligenes spp.)
Compound: Mercury (Hg)Description: Mercuric transport protein MerT; determines hyperaccumulation of Hg++ but not the CH3Hg+; Involved in mercuric transport. Passes a mercury ion from the periplasmic merP protein to the mercuric reductase (merA).
Length (amino acid): 116
Reference: Hamlett et al. 1992; Pubmed- 1328156, Kiyono et al. 2000; Pubmed- 10726879
|
Similar resistance genes in 'BacMet Predicted database' |
merT | BacMet ID: BAC0695Code for: Membrane Transporter
Family: MerT familySequence: FASTA
Cross-database IDs: Link
Organism: Serratia marcescensLocation: Plasmid pDU1358 (Serratia marcescens)
Compound: Mercury (Hg)Description: Inner mebrane protein. Involved in mercuric transport. Passes a mercury ion from the periplasmic MerP protein to the mercuric reductase (MerA).
Length (amino acid): 116
Reference: Nucifora et al. 1989; Pubmed- 2691875
|
Similar resistance genes in 'BacMet Predicted database' |
merT | BacMet ID: BAC0696Code for: Membrane Transporter
Family: MerT familySequence: FASTA
Cross-database IDs: Link
Organism: Staphylococcus aureusLocation: Plasmid pI258
Compound: Mercury (Hg)Description: Involved in mercuric transport. Passes a mercury ion from the MerP protein to the mercuric reductase MerA.
Length (amino acid): 128
Reference: Laddaga et al. 1987; Pubmed- 3037534
|
Similar resistance genes in 'BacMet Predicted database' |
merT | BacMet ID: BAC0697Code for: Membrane Transporter
Family: MerT familySequence: FASTA
Cross-database IDs: Link
Organism: Bacillus sp. (strain RC607)Location: Chromosome
Compound: Mercury (Hg)Description: Mercury transport protein
Length (amino acid): 98
Reference: Gupta et al. 1999; Pubmed- 10559175
|
Similar resistance genes in 'BacMet Predicted database' |
merT-P | BacMet ID: BAC0694Code for: Membrane Transporter
Family: MerT familySequence: FASTA
Cross-database IDs: Link
Organism: Tenacibaculum discolor 9A5Location: Chromosome
Compound: Mercury (Hg)Description: A novel putative transport protein consisting of a fusion between the integral membrane Hg(II) transporter MerT and the periplasmic Hg(II)-binding protein MerP.
Length (amino acid): 204
Reference: Allen et al. 2013; Pubmed- 22816663
|
Similar resistance genes in 'BacMet Predicted database' |
mexA | BacMet ID: BAC0234Code for: Efflux
Family: Membrane fusion protein (MFP)Sequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosa (strain ATCC 15692/PAO1/1C/PRS 101/LMG 12228)Location: Chromosome
Compound: Triclosan [class: Phenolic compounds], n-hexane [class: Alkane], p-xylene [class: Aromatic hydrocarbons]Description: Multidrug resistance protein MexA; The periplasmic linker component of the mexAB-oprM efflux system that confers multidrug resistance. Also functions as the major efflux pump for n-hexane and p-xylene efflux. Over-Expression of the pump increases antibiotic and solvent efflux capacities. Required for assembly of the mexA/mexB/oprM complex. Implicated in the secretion of the siderophore pyoverdine; The ability to export antibiotics and solvents is dramatically decreased in the presence of the proton conductor carbonyl cyanide m-chlorophenylhydrazone (CCCP), showing that an energized inner membrane is required for efflux. It is thought that the mexB subunit is a proton antiporter.
Length (amino acid): 383
Reference: Li et al. 1995: Pubmed- 8540696, Li et al. 1998; Pubmed- 9603892, Poole et al. 1993; Pubmed- 8226684
|
Similar resistance genes in 'BacMet Predicted database' |
mexB | BacMet ID: BAC0235Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosa (strain ATCC 15692/PAO1/1C/PRS 101/LMG 12228)Location: Chromosome
Compound: Triclosan [class: Phenolic compounds], n-hexane [class: Alkane], p-xylene [class: Aromatic hydrocarbons]Description: Multidrug resistance protein MexB; The inner membrane transporter component of the MexAB-OprM efflux system that confers multidrug resistance. Also functions as the major efflux pump for n-hexane and p-xylene efflux. Over-Expression of the pump increases antibiotic and solvent efflux capacities. Implicated in the secretion of the siderophore pyoverdine; The ability to Export antibiotics and solvents is dramatically decreased in the presence of the proton conductor carbonyl cyanide m-chlorophenylhydrazone (CCCP), showing that an energized inner membrane is required for efflux. It is thought that the MexB subunit is a proton antiporter.
Length (amino acid): 1046
Reference: Li et al. 1995: Pubmed- 8540696, Li et al. 1998; Pubmed- 9603892, Poole et al. 1993; Pubmed- 8226684
|
Similar resistance genes in 'BacMet Predicted database' |
mexC | BacMet ID: BAC0236Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosaLocation: Chromosome
Compound: Triclosan [class: Phenolic compounds], n-hexane [class: Alkane], p-xylene [class: Aromatic hydrocarbons]Description: Membrane fusion protein MexC; part of mexCD-oprJ efflux operon; The mexCD-oprJ is a second efflux pump besides mexAB-oprM operon in Pseudomonas aeruginosa.
Length (amino acid): 387
Reference: Poole et al. 1996; Pubmed- 8878035, Li et al. 1998; Pubmed- 9603892
|
Similar resistance genes in 'BacMet Predicted database' |
mexD | BacMet ID: BAC0237Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosaLocation: Chromosome
Compound: Triclosan [class: Phenolic compounds], n-hexane [class: Alkane], p-xylene [class: Aromatic hydrocarbons]Description: Multidrug efflux RND transporter MexD; part of mexCD-oprJ efflux operon; The mexCD-oprJ is a second efflux pump besides mexAB-oprM operon in Pseudomonas aeruginosa.
Length (amino acid): 1042
Reference: Poole et al. 1996; Pubmed- 8878035, Li et al. 1998; Pubmed- 9603892
|
Similar resistance genes in 'BacMet Predicted database' |
mexE | BacMet ID: BAC0238Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas entomophila (strain L48)Location: Chromosome
Compound: Triclosan [class: Phenolic compounds], n-hexane [class: Alkane], p-xylene [class: Aromatic hydrocarbons]Description: Multidrug efflux RND membrane fusion protein MexE; part of mexE-mexF-oprN efflux operon
Length (amino acid): 413
Reference: Kohler et al. 1997; Pubmed- 9044268, Li et al. 1998; Pubmed- 9603892
|
Similar resistance genes in 'BacMet Predicted database' |
mexF | BacMet ID: BAC0239Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas fluorescens (strain Pf-5/ATCC BAA-477)Location: Chromosome
Compound: Triclosan [class: Phenolic compounds], n-hexane [class: Alkane], p-xylene [class: Aromatic hydrocarbons]Description: Multidrug efflux RND transporter, permease protein MexF; part of mexE-mexF-oprN efflux operon
Length (amino acid): 1059
Reference: Kohler et al. 1997; Pubmed- 9044268, Li et al. 1998; Pubmed- 9603892
|
Similar resistance genes in 'BacMet Predicted database' |
mexI | BacMet ID: BAC0240Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosa 138244Location: Chromosome
Compound: Vanadium (V), Triclosan [class: Phenolic compounds]Description: RND Multidrug efflux transporter mexI; Part of mexGHI-ompD efflux pump operon. The efflux pump also involved in N-acyl-homoserine lactones (AHLs) homeostsis in Pseudomonas aeruginosa.
Length (amino acid): 1029
Reference: Aendekerk et al. 2002; Pubmed- 12177331
|
Similar resistance genes in 'BacMet Predicted database' |
mexJ | BacMet ID: BAC0241Code for: Efflux
Family: RND Superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)Location: Chromosome
Compound: Triclosan [class: Phenolic compounds]Description: Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein mexJ; part of mexJ-mexK-oprM efflux system; OprJ and OprN do not function with MexJK; Triclosan efflux required neither of the outer membrane protein but must associate with OprM to form a tripartite antibiotic efflux system
Length (amino acid): 367
Reference: Chuanchuen et al. 2002; Pubmed- 12193619
|
Similar resistance genes in 'BacMet Predicted database' |
mexK | BacMet ID: BAC0242Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)Location: Chromosome
Compound: Triclosan [class: Phenolic compounds]Description: RND efflux transporter mexK; part of mexJ-mexK-oprM efflux system; OprJ and OprN do not function with MexJK; Triclosan efflux required neither of the outer membrane protein but must associate with OprM to form a tripartite antibiotic efflux system
Length (amino acid): 1025
Reference: Chuanchuen et al. 2002; Pubmed- 12193619
|
Similar resistance genes in 'BacMet Predicted database' |
mexR | BacMet ID: BAC0243Code for: Regulator
Family: RND superfamily, MarR familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)Location: Chromosome
Compound: Triclosan [class: Phenolic compounds]Description: Repressor of the mexAB-oprM multidrug resistance operon mexR. Also represses its own Expression. Many variants lead to increased Expression of the mexAB-oprM operon
Length (amino acid): 147
Reference: Poole et al. 1996; Pubmed- 8878574
|
Similar resistance genes in 'BacMet Predicted database' |
mexT | BacMet ID: BAC0244Code for: Regulator
Family: Contains 1 HTH lysR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosaLocation: Chromosome
Compound: Triclosan [class: Phenolic compounds]Description: Transcriptional regulator MexT; the regulator of the MexEF-OprN efflux operon
Length (amino acid): 304
Reference: Kohler et al. 1999; Pubmed- 10515918
|
Similar resistance genes in 'BacMet Predicted database' |
mexV | BacMet ID: BAC0245Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)Location: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine]Description: Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein mexV; part of mexVW-oprM efflux system
Length (amino acid): 376
Reference: Li et al. 2003: Pubmed- 12951344
|
Similar resistance genes in 'BacMet Predicted database' |
mexW | BacMet ID: BAC0246Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)Location: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine]Description: Resistance-Nodulation-Cell Division (RND) efflux transporter mexW; part of mexVW-oprM efflux system
Length (amino acid): 1018
Reference: Li et al. 2003: Pubmed- 12951344
|
Similar resistance genes in 'BacMet Predicted database' |
mexX | BacMet ID: BAC0247Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosaLocation: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine]Description: Resistance-Nodulation-Cell Division (RND) efflux transporter mexX; E. coli ToIC or P. aeruginosa OprM is necessary for the function of the MexXY system
Length (amino acid): 389
Reference: Mine et al. 1999, Pubmed- 9925549
|
Similar resistance genes in 'BacMet Predicted database' |
mexY | BacMet ID: BAC0248Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosaLocation: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine]Description: Resistance-Nodulation-Cell Division (RND) efflux transporter mexY; E. coli ToIC or P. aeruginosa OprM is necessary for the function of the MexXY system
Length (amino acid): 1046
Reference: Mine et al. 1999, Pubmed- 9925549
|
Similar resistance genes in 'BacMet Predicted database' |
mgtA | BacMet ID: BAC0642Code for: Enzyme
Family: Cation transport ATPase (P-type) familySequence: FASTA
Cross-database IDs: Link
Organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)Location: Chromosome
Compound: Cobalt (Co), Magnesium (Mg)Description: Mediates magnesium influx to the cytosol.
Length (amino acid): 902
Reference: Tao et al. 1995; Pubmed- 7751273
|
Similar resistance genes in 'BacMet Predicted database' |
mgtA | BacMet ID: BAC0087Code for: Enzyme
Family: Cation transport ATPase (P-type) familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Cobalt (Co), Magnesium (Mg)Description: Magnesium-transporting ATPase, P-type 1; Mediates magnesium influx to the cytosol.
Length (amino acid): 898
Reference: Park et al. 1976; Pubmed- 780341, Minagawa et al. 2003; Pubmed- 12813061,
|
Similar resistance genes in 'BacMet Predicted database' |
mmco | BacMet ID: BAC0480Code for: Enzyme
Family: Multicopper oxidase (mco) familySequence: FASTA
Cross-database IDs: Link
Organism: Mycobacterium tuberculosisLocation: Chromosome
Compound: Copper (Cu)Description: Mmco is required for copper resistance in Mycobacterium tuberculosis. It acts by oxidation of toxic Cu(I) in the periplasm.
Length (amino acid): 504
Reference: Rowland et al. 2013; Pubmed- 23772064
|
Similar resistance genes in 'BacMet Predicted database' |
mmR | BacMet ID: BAC0249Code for: Efflux
Family: SMR family, mmr subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Mycobacterium tuberculosisLocation: Chromosome
Compound: Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Acriflavine [class: Acridine], Ethidium Bromide [class: Phenanthridine], Safranin O [class: Azin], Pyronin Y [class: Xanthene]Description: Multidrug efflux pump mmR. Confers resistance to tetraphenylphosphonium (TPP), erythromycin, ethidium bromide, acriflavine, safranin O and pyronin Y.
Length (amino acid): 107
Reference: Rossi et al. 1998; Pubmed- 9811672
|
Similar resistance genes in 'BacMet Predicted database' |
mntA/ytgA | BacMet ID: BAC0250Code for: Binding protein
Family: Bacterial solute-binding protein 9 familySequence: FASTA
Cross-database IDs: Link
Organism: Bacillus subtilis (strain 168)Location: Chromosome
Compound: Manganese (Mn), Cadmium (Cd)Description: Manganese-binding lipoprotein MntA; This protein is a component of a manganese permease, a binding protein-dependent, ATP-driven transport system. May be the major manganese uptake system during sporulation
Length (amino acid): 306
Reference: Hao et al. 1999; Pubmed- 10543781, Que et al. 2000; Pubmed- 10760146
|
Similar resistance genes in 'BacMet Predicted database' |
mntH/yfeP | BacMet ID: BAC0251Code for: Membrane Transporter
Family: NRAMP familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Manganese (Mn), Iron (Fe), Cadmium (Cd), Cobalt (Co), Zinc (Zn)Description: Divalent metal cation transporter MntH; H+-stimulated, divalent metal cation uptake system. Involved in manganese and iron uptake. Can also transport cadmium, cobalt, zinc and to a lesser extent nickel and copper. Involved in response to reactive oxygen.
Length (amino acid): 412
Reference: Makui et al. 2000; Pubmed- 10712688
|
Similar resistance genes in 'BacMet Predicted database' |
mntP/yebN | BacMet ID: BAC0252Code for: Efflux
Family: MntP familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli K-12Location: Chromosome
Compound: Manganese (Mn), Magnesium (Mg), Methyl Viologen [class: Paraquat], Hydrogen Peroxide (H2O2) [class: Peroxides]Description: MntP; Functions as a manganese efflux pump
Length (amino acid): 188
Reference: Li et al. 2011; Pubmed- 21789199, Waters et al. 2011; Pubmed- 21908668
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Similar resistance genes in 'BacMet Predicted database' |
mntR | BacMet ID: BAC0253Code for: Regulator
Family: Contains 1 HTH dtxR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coliLocation: Chromosome
Compound: Manganese (Mn), Magnesium (Mg)Description: Manganese transport regulator mntR; In the presence of manganese, represses expression of mntH and mntS. Up-regulates expression of mntP
Length (amino acid): 155
Reference: Waters et al. 2011; Pubmed- 21908668, Que et al. 2000; Pubmed- 10760146
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Similar resistance genes in 'BacMet Predicted database' |
modA | BacMet ID: BAC0598Code for: Binding protein
Family: ABC superfamily, bacterial solute-binding protein ModA family.Sequence: FASTA
Cross-database IDs: Link
Organism: Desulfovibrio vulgaris Hildenborough (strain GZ6027)Location: Chromosome
Compound: Tungsten (W), Molybdenum (Mo)Description: Molybdenum ABC transporter, periplasmic molybdenum-binding protein. Part of the ModABC transport system.
Length (amino acid): 269
Reference: Kazarov et al. 2013; Pubmed- 23913324
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Similar resistance genes in 'BacMet Predicted database' |
modA | BacMet ID: BAC0609Code for: Binding protein
Family: ABC superfamily, bacterial solute-binding protein ModA family.Sequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Tungsten (W), Molybdenum (Mo)Description: Molybdate-binding periplasmic protein. Involved in the transport of molybdenum into the cell. Binds molybdate with high specificity and affinity.
Length (amino acid): 257
Reference: Rech et al. 1995; Pubmed- 7860583, Walkenhorst et al. 1995; Pubmed- 8564363
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Similar resistance genes in 'BacMet Predicted database' |
modB | BacMet ID: BAC0599Code for: Enzyme
Family: ABC superfamily, binding-protein-dependent transport system permease family. CysTW subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Desulfovibrio vulgaris Hildenborough (strain GZ6027)Location: Chromosome
Compound: Tungsten (W), Molybdenum (Mo)Description: Molybdenum ABC transporter, permease protein. Part of the ModABC transport system. Responsible for the translocation of the substrate across the membrane. modB gene encodes the integral membrane protein ModB, which builds the membrane channel of the ModABC transporter.
Length (amino acid): 233
Reference: Kazarov et al. 2013; Pubmed- 23913324
|
Similar resistance genes in 'BacMet Predicted database' |
modB | BacMet ID: BAC0610Code for: Enzyme
Family: ABC superfamily, binding-protein-dependent transport system permease family. CysTW subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Tungsten (W), Molybdenum (Mo)Description: Molybdenum transport system permease protein ModB. Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane.
Length (amino acid): 229
Reference: Rech et al. 1995; Pubmed- 7860583, Walkenhorst et al. 1995; Pubmed- 8564363
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Similar resistance genes in 'BacMet Predicted database' |
modC | BacMet ID: BAC0600Code for: Enzyme
Family: ABC superfamily, Molybdate importer familySequence: FASTA
Cross-database IDs: Link
Organism: Desulfovibrio vulgaris Hildenborough (strain GZ6027)Location: Chromosome
Compound: Tungsten (W), Molybdenum (Mo)Description: Molybdenum ABC transporter, ATPase subunit of the ModABC complex. Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system.
Length (amino acid): 253
Reference: Kazarov et al. 2013; Pubmed- 23913324
|
Similar resistance genes in 'BacMet Predicted database' |
modC | BacMet ID: BAC0611Code for: Enzyme
Family: ABC transporter superfamily. Molybdate importer familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Tungsten (W), Molybdenum (Mo)Description: Molybdenum import ATP-binding protein ModC. Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system.
Length (amino acid): 352
Reference: Rech et al. 1995; Pubmed- 7860583, Walkenhorst et al. 1995; Pubmed- 8564363
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Similar resistance genes in 'BacMet Predicted database' |
modE | BacMet ID: BAC0608Code for: Regulator
Family: ModE familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Tungsten (W), Molybdenum (Mo)Description: Transcriptional regulator ModE. The ModE-Mo complex acts as a repressor of the modABC operon, involved in the transport of molybdate. It controls tungstate and molybdate homeostasis in bacteria.
Length (amino acid): 262
Reference: Rech et al. 1995; Pubmed- 7860583, Walkenhorst et al. 1995; Pubmed- 8564363, Grunden et al. 1996; Pubmed- 8550508
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Similar resistance genes in 'BacMet Predicted database' |
mrdH | BacMet ID: BAC0254Code for: Membrane Transporter
Family: NicO familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putida (strain KT2440)Location: Plasmid pWW0 (Pseudomonas putida (Arthrobacter siderocapsulatus))
Compound: Nickel (Ni), Cadmium (Cd), Zinc (Zn), Cobalt (Co)Description: Membrane protein transpoeter mrdH
Length (amino acid): 377
Reference: Haritha et al. 2009; Pubmed- 19648243
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Similar resistance genes in 'BacMet Predicted database' |
mreA | BacMet ID: BAC0255Code for: Regulator
Family: ABC superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putida (strain KT2440)Location: Chromosome
Compound: Nickel (Ni), Zinc (Zn)Description: Metal-sensitive repressor mreA, involved in resistance to metal ions. Bind nickel or zinc ions via conserved cysteine and histidine residues. In the absence of metal ions, this protein bind to promoter regions and repress transcription
Length (amino acid): 95
Reference: Haritha et al. 2009; Pubmed- 19648243
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Similar resistance genes in 'BacMet Predicted database' |
mtrA | BacMet ID: BAC0256Code for: Regulator
Family: AraC/XylS familySequence: FASTA
Cross-database IDs: Link
Organism: Neisseria gonorrhoeaeLocation: Chromosome
Compound: Triton X-100 [class: Polyethylene glycol]Description: Two component sensory transduction transcriptional regulatory protein MtrA; play an important role in enhancing transcription of the mtrCDE operon
Length (amino acid): 301
Reference: Rouquette et al. 1999; Pubmed- 10417654
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Similar resistance genes in 'BacMet Predicted database' |
mtrC | BacMet ID: BAC0257Code for: Efflux
Family: MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Neisseria gonorrhoeaeLocation: Chromosome
Compound: Triton X-100 [class: Polyethylene glycol], Crystal Violet [class: Triarylmethane]Description: Membrane fusion protein MtrC; part of MtrCDE efflux pump; Cell membrane lipoprotein, involved in cell membrane permeability to hydrophobic compounds such as antibiotics, dyes and detergents
Length (amino acid): 412
Reference: Hagman et al. 1995; Pubmed- 7711899, Lucas et al. 1995; Pubmed- 7476176, Veal et al. 1998; Pubmed- 9534233
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Similar resistance genes in 'BacMet Predicted database' |
mtrD | BacMet ID: BAC0258Code for: Efflux
Family: AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090)Location: Chromosome
Compound: Triton X-100 [class: Polyethylene glycol]Description: Antibiotic resistance efflux pump component mtrD; part of MtrCDE efflux pump
Length (amino acid): 1067
Reference: Veal et al. 1998; Pubmed- 9534233, Hagman et al. 1995; Pubmed- 7711899, Lucas et al. 1995; Pubmed- 7476176
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Similar resistance genes in 'BacMet Predicted database' |
mtrE | BacMet ID: BAC0259Code for: Efflux
Family: RND Superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Neisseria gonorrhoeae (strain NCCP11945)Location: Chromosome
Compound: Triton X-100 [class: Polyethylene glycol], Sodium Cholate [class: Acid]Description: Antibiotic resistance efflux pump component ; Outer membrane protein mtrE; part of MtrCDE efflux pump
Length (amino acid): 467
Reference: Delahay et al. 1997; Pubmed- 9245802, Hagman et al. 1995; Pubmed- 7711899, Lucas et al. 1995; Pubmed- 7476176
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Similar resistance genes in 'BacMet Predicted database' |
mtrF | BacMet ID: BAC0260Code for: Efflux
Family: ABG ransporter familySequence: FASTA
Cross-database IDs: Link
Organism: Neisseria gonorrhoeae (strain NCCP11945)Location: Chromosome
Compound: Triton X-100 [class: Polyethylene glycol]Description: Antibiotic resistance efflux pump component mtrF; inner membrane protein
Length (amino acid): 533
Reference: Veal et al. 2003; Pubmed- 12493784, Folster et al. 2006; Pubmed- 15901695
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Similar resistance genes in 'BacMet Predicted database' |
mtrR | BacMet ID: BAC0261Code for: Regulator
Family: TetR (tetracycline resistance) familySequence: FASTA
Cross-database IDs: Link
Organism: Neisseria gonorrhoeaeLocation: Chromosome
Compound: Triton X-100 [class: Polyethylene glycol], Crystal Violet [class: Triarylmethane]Description: HTH-type transcriptional regulator MtrR; Repressor of the mtrC gene. the major repressor of mtrCDE expression; Controls the permeability of the cell envelope to hydrophobic compounds such as antibiotics and detergents
Length (amino acid): 210
Reference: Pan et al. 1994; Pubmed- 8196548, Hagman et al. 1995; Pubmed- 7711899
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Similar resistance genes in 'BacMet Predicted database' |
mymT | BacMet ID: BAC0262Code for: Binding protein
Family: Metallothionein superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Mycobacterium tuberculosisLocation: Chromosome
Compound: Copper (Cu), Nickel (Ni), Zinc (Zn)Description: Cu(I)-binding metallothionein mymT; Metallothioneins are small proteins that have a high content of cysteine residues wich allow them to bind heavy metal ions through clusters of thiolate bonds. MymT binds up to seven ions of Cu+, with a preference for four to six Cu+ ions, in a solvent-shielded core. MymT protects M. tuberculosis from copper toxicity. Up-regulated by copper, cadmium, cobalt, nickel and zinc, but not manganese.
Length (amino acid): 53
Reference: Gold et al. 2011; Pubmed- 18724363, Festa et al. 2011; Pubmed- 21166899
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Similar resistance genes in 'BacMet Predicted database' |
nccA | BacMet ID: BAC0549Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Alcaligenes xylosoxidans 31ALocation: Plasmid pTOM9
Compound: Nickel (Ni), Cobalt (Co), Cadmium (Cd)Description: Nickel-cobalt-cadmium resistance protein NccA. Component of the NCC cation-efflux system (nccYXHCBAN) that confers resistance to nickel, cobalt and cadmium. May form a membrane tunnel, which allows ion transport across the membrane.
Length (amino acid): 1076
Reference: Schmidt et al. 1994; Pubmed- 7961470
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Similar resistance genes in 'BacMet Predicted database' |
nccB | BacMet ID: BAC0550Code for: Efflux
Family: RND superfamily, Membrane Fusion Protein (MFP) familySequence: FASTA
Cross-database IDs: Link
Organism: Alcaligenes xylosoxidans 31ALocation: Plasmid pTOM9
Compound: Nickel (Ni), Cobalt (Co), Cadmium (Cd)Description: Nickel-cobalt-cadmium resistance protein NccB. Component of the NCC cation efflux system ((nccYXHCBAN)) that confers resistance to nickel, cobalt and cadmium.
Length (amino acid): 397
Reference: Schmidt et al. 1994; Pubmed- 7961470
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Similar resistance genes in 'BacMet Predicted database' |
nccC | BacMet ID: BAC0551Code for: Efflux
Family: RND superfamily, Outer Membrane factor (OMF) familySequence: FASTA
Cross-database IDs: Link
Organism: Alcaligenes xylosoxidans 31ALocation: Plasmid pTOM9
Compound: Nickel (Ni), Cobalt (Co), Cadmium (Cd)Description: Nickel-cobalt-cadmium resistance protein NccC. Component of the NCC cation-efflux system (nccYXHCBAN)) that confers resistance to nickel, cobalt and cadmium.
Length (amino acid): 437
Reference: Schmidt et al. 1994; Pubmed- 7961470
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Similar resistance genes in 'BacMet Predicted database' |
nccH | BacMet ID: BAC0555Code for: Regulator
Family: Sigma-70 factor family. ECF subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Alcaligenes xylosoxidans 31ALocation: Plasmid pTOM9
Compound: Nickel (Ni), Cobalt (Co), Cadmium (Cd)Description: RNA polymerase sigma factor NccH. Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor regulates the genes for a membrane-located efflux system ((nccYXHCBAN) that confers resistance to nickel, cobalt and cadmium.
Length (amino acid): 186
Reference: Schmidt et al. 1994; Pubmed- 7961470
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Similar resistance genes in 'BacMet Predicted database' |
nccN | BacMet ID: BAC0554Code for: Membrane Transporter
Family: Contains 1 Phospholipid methyltransferase domainSequence: FASTA
Cross-database IDs: Link
Organism: Alcaligenes xylosoxidans 31ALocation: Plasmid pTOM9
Compound: Nickel (Ni), Cobalt (Co), Cadmium (Cd)Description: Nickel-cobalt-cadmium resistance protein NccN. Component of the NCC cation-efflux system (nccYXHCBAN) that confers resistance to nickel, cobalt and cadmium. Appears to be involved in metal specificity but affects only nickel resistance. May be involved in nickel transport.
Length (amino acid): 213
Reference: Schmidt et al. 1994; Pubmed- 7961470
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Similar resistance genes in 'BacMet Predicted database' |
nccX | BacMet ID: BAC0553Code for: Regulator
Family: contains 1 heavy-metal resistance domainSequence: FASTA
Cross-database IDs: Link
Organism: Alcaligenes xylosoxidans 31ALocation: Plasmid pTOM9
Compound: Nickel (Ni), Cobalt (Co), Cadmium (Cd)Description: Nickel-cobalt-cadmium resistance protein NccX. Component of the Ncc cation-efflux system ((nccYXHCBAN)) that confers resistance to nickel, cobalt and cadmium. May be involved in the regulation of Ncc.
Length (amino acid): 148
Reference: Schmidt et al. 1994; Pubmed- 7961470
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Similar resistance genes in 'BacMet Predicted database' |
nccY | BacMet ID: BAC0552Code for: Regulator
Family: UnknownSequence: FASTA
Cross-database IDs: Link
Organism: Alcaligenes xylosoxidans 31ALocation: Plasmid pTOM9
Compound: Nickel (Ni), Cobalt (Co), Cadmium (Cd)Description: Nickel-cobalt-cadmium resistance protein NccY. Component of the Ncc cation-efflux system that confers resistance to nickel, cobalt and cadmium. May be involved in the regulation of Ncc.
Length (amino acid): 95
Reference: Schmidt et al. 1994; Pubmed- 7961470
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Similar resistance genes in 'BacMet Predicted database' |
ncrA | BacMet ID: BAC0263Code for: Efflux
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Leptospirillum ferriphilumLocation: Chromosome
Compound: Nickel (Ni)Description: Chromosomal nickel-resistant determinant ncrA found both in chromosome and plasmids. Part of ncrABCY nickel resistance Chromosomal determinant system. It encodes a membrane protein that forms an efflux with another membrane protein ncrC.
Length (amino acid): 432
Reference: Tian et al. 2007; Pubmed- 17293508, Zhu et al. 2011; Pubmed- 21387010
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Similar resistance genes in 'BacMet Predicted database' |
ncrA | BacMet ID: BAC0698Code for: Efflux
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Serratia marcescens strain C-1Location: Chromosome
Compound: Cobalt (Co), Nickel (Ni)Description: Part of the ncrABC determinant sytem. NcrA contributes to nickel and cobalt resistance in this bacterium.
Length (amino acid): 432
Reference: Marrero et al. 2007; Pubmed- 17186148
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Similar resistance genes in 'BacMet Predicted database' |
ncrA | BacMet ID: BAC0702Code for: Efflux
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Hafnia alvei 5-5Location: Plasmid pNRS148
Compound: Cobalt (Co), Nickel (Ni)Description: Plasmid-borne ncrA protein. It encodes a membrane protein that forms an efflux with another membrane protein ncrC. Part of ncrABCY nickel resistance determinant system.
Length (amino acid): 277
Reference: Park et al. 2004; Pubmed- 15179604
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Similar resistance genes in 'BacMet Predicted database' |
ncrB | BacMet ID: BAC0264Code for: Regulator
Family: Transcriptional repressor metal familySequence: FASTA
Cross-database IDs: Link
Organism: Leptospirillum ferriphilumLocation: Chromosome
Compound: Nickel (Ni)Description: Chromosomal nickel-resistant determinant ncrB which is cytoplasmic, histidine-rich protein found in both chromosome and plasmids; probabale metal-sensitive repressor, involved in resistance to nickel ions
Length (amino acid): 89
Reference: Tian et al. 2007; Pubmed- 17293508, Zhu et al. 2011; Pubmed- 21387010
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Similar resistance genes in 'BacMet Predicted database' |
ncrB | BacMet ID: BAC0699Code for: Regulator
Family: Transcriptional repressor metal familySequence: FASTA
Cross-database IDs: Link
Organism: Serratia marcescens strain C-1Location: Chromosome
Compound: Cobalt (Co), Nickel (Ni)Description: Probabale metal-sensitive repressor, involved in resistance to nickel ions. Part of ncrABCY nickel resistance determinant system.
Length (amino acid): 89
Reference: Marrero et al. 2007; Pubmed- 17186148
|
Similar resistance genes in 'BacMet Predicted database' |
ncrB | BacMet ID: BAC0703Code for: Regulator
Family: Transcriptional repressor metal familySequence: FASTA
Cross-database IDs: Link
Organism: Hafnia alvei 5-5Location: Plasmid pNRS148
Compound: Cobalt (Co), Nickel (Ni)Description: Plasmid-borne ncrB protein. Probabale metal-sensitive repressor, involved in resistance to nickel ions. Part of ncrABCY nickel resistance determinant system.
Length (amino acid): 301
Reference: Park et al. 2004; Pubmed- 15179604
|
Similar resistance genes in 'BacMet Predicted database' |
ncrC | BacMet ID: BAC0265Code for: Efflux
Family: NicOT familySequence: FASTA
Cross-database IDs: Link
Organism: Leptospirillum ferriphilumLocation: Chromosome
Compound: Nickel (Ni)Description: Chromosomal nickel-resistant membrane protein NcrC found both in chromosome and plasmids. Part of ncrABCY nickel resistance determinant system. It encodes a membrane protein that forms an efflux with another membrane protein ncrA.
Length (amino acid): 376
Reference: Tian et al. 2007; Pubmed- 17293508, Zhu et al. 2011; Pubmed- 21387010
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Similar resistance genes in 'BacMet Predicted database' |
ncrC | BacMet ID: BAC0700Code for: Efflux
Family: Nickel-cobalt transport (NicOT) familySequence: FASTA
Cross-database IDs: Link
Organism: Serratia marcescens strain C-1Location: Chromosome
Compound: Cobalt (Co), Nickel (Ni)Description: Part of ncrABCY nickel resistance determinant system. It encodes a membrane protein that forms an efflux with another membrane protein ncrA.
Length (amino acid): 231
Reference: Marrero et al. 2007; Pubmed- 17186148
|
Similar resistance genes in 'BacMet Predicted database' |
ncrC | BacMet ID: BAC0704Code for: Efflux
Family: Nickel-cobalt transport (NicOT) familySequence: FASTA
Cross-database IDs: Link
Organism: Hafnia alvei 5-5Location: Plasmid pNRS148
Compound: Cobalt (Co), Nickel (Ni)Description: Plasmid-borne ncrC protein. Part of ncrABCY nickel resistance determinant system. It encodes a membrane protein that forms an efflux with another membrane protein ncrA.
Length (amino acid): 152
Reference: Park et al. 2004; Pubmed- 15179604
|
Similar resistance genes in 'BacMet Predicted database' |
ncrY | BacMet ID: BAC0266Code for: Regulator
Family: Bacterial OB fold (BOF) protein familySequence: FASTA
Cross-database IDs: Link
Organism: Leptospirillum ferriphilumLocation: Chromosome
Compound: Nickel (Ni)Description: Chromosoaml nickel-resistant determinant ncrY found both in chromosome and plasmids; some claims it has a negative effect on nickel resistance.
Length (amino acid): 140
Reference: Tian et al. 2007; Pubmed- 17293508, Zhu et al. 2011; Pubmed- 21387010
|
Similar resistance genes in 'BacMet Predicted database' |
ncrY | BacMet ID: BAC0701Code for: Regulator
Family: Bacterial OB fold (BOF) protein familySequence: FASTA
Cross-database IDs: Link
Organism: Hafnia alvei 5-5Location: Plasmid pNRS148
Compound: Cobalt (Co), Nickel (Ni)Description: Plasmid-borne NcrY protein. Part of ncrABCY nickel resistance determinant system. Some claims it has a negative effect on nickel resistance.
Length (amino acid): 63
Reference: Park et al. 2004; Pubmed- 15179604
|
Similar resistance genes in 'BacMet Predicted database' |
nczA | BacMet ID: BAC0267Code for: Regulator
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Caulobacter crescentus (strain NA1000 / CB15N)Location: Chromosome
Compound: Nickel (Ni), Cobalt (Co), Zinc (Zn)Description: Nickel-cobalt-zinc resistance protein nczA; part of the nczCBA operon; The nczCBA operon is induced maximally by Ni2+ and Co2+, moderately by Zn2+ but not by Cd2+. NczCBA transports Ni2+ Co2+ and probably Zn2+
Length (amino acid): 1057
Reference: Valencia et al. 2013; Pubmed- 23578014
|
Similar resistance genes in 'BacMet Predicted database' |
nfsA | BacMet ID: BAC0540Code for: Enzyme
Family: Flavin oxidoreductase frp familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli K12Location: Chromosome
Compound: Chromium (Cr)Description: A major oxygen-insensitive nitroreductase of Escherichia coli, is a flavoprotein that is able to reduce chromate to less soluble and less toxic Cr(III). Reduction of nitroaromatic compounds using NADH. Reduces nitrofurazone by a ping-pong bi-bi mechanism possibly to generate a two-electron transfer product. Major component of the oxygen-insensitive nitroreductase activity in E.coli.
Length (amino acid): 240
Reference: Ackerley et al. 2004; Pubmed- 15250887
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Similar resistance genes in 'BacMet Predicted database' |
nhlF | BacMet ID: BAC0268Code for: Enzyme
Family: Nickel-cobalt transport (NicOT) familySequence: FASTA
Cross-database IDs: Link
Organism: Rhodococcus rhodochrousLocation: Chromosome
Compound: Cobalt (Co)Description: Cobalt transporter nhlF. It has a significant sequence similarity to hoxN from Alcaligenes eutrophus, hupN from Bradyrhizobium japonicum, nixA from Helicobacter pylori etc. The protein has eight hydrophobic putative membrane-spanning domains.
Length (amino acid): 352
Reference: Komeda et al. 1997; Pubmed- 8990157
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Similar resistance genes in 'BacMet Predicted database' |
nia | BacMet ID: BAC0269Code for: Enzyme
Family: Cation transport ATPase (P-type) familySequence: FASTA
Cross-database IDs: Link
Organism: Sinorhizobium melitoliLocation: Plasmid pSymA (Sinorhizobium melitoli)
Compound: Iron (Fe), Nickel (Ni)Description: P1B-5-ATPase; Has role in detoxification of Fe (II)+ and Ni (II)+ under free living conditions as well as in symbiosis.
Length (amino acid): 799
Reference: Zielazinski et al. 2013; Pubmed- 24056637
|
Similar resistance genes in 'BacMet Predicted database' |
nikA | BacMet ID: BAC0270Code for: Binding protein
Family: Bacterial solute-binding protein 5 familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Nickel (Ni)Description: Nickel-binding periplasmic protein nikA; Involved in a nickel transport system, represents the nickel binder. Part of the Nik operon (NikABCDE), Solute-binding protein
Length (amino acid): 524
Reference: Wu et al. 1991; Pubmed- 1743519, De Pina et al. 1995; Pubmed- 7867647
|
Similar resistance genes in 'BacMet Predicted database' |
nikB | BacMet ID: BAC0271Code for: Membrane Transporter
Family: Binding-protein-dependent transport system permease family. OppBC subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Nickel (Ni)Description: Nickel transport system permease protein NikB; Transmembrane protein; Involved in a nickel transport system, probably translocates nickel through the bacterial inner membrane. Part of the Nik operon (NikABCDE)
Length (amino acid): 314
Reference: Wu et al. 1991; Pubmed- 1743519, Navarro et al. 1993; Pubmed- 7934931
|
Similar resistance genes in 'BacMet Predicted database' |
nikC | BacMet ID: BAC0272Code for: Membrane Transporter
Family: Binding-protein-dependent transport system permease family. OppBC subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Nickel (Ni)Description: Nickel transport system permease protein NikC; Transmembrane protein; Involved in a nickel transport system, probably translocates nickel through the bacterial inner membrane. Part of the Nik operon (NikABCDE)
Length (amino acid): 277
Reference: Navarro et al. 1993; Pubmed- 7934931
|
Similar resistance genes in 'BacMet Predicted database' |
nikD | BacMet ID: BAC0273Code for: Binding protein
Family: ABC transporter superfamily. Nickel importer familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Nickel (Ni)Description: Nickel import ATP-binding protein NikD; Part of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system. Part of the Nik operon (NikABCDE)
Length (amino acid): 254
Reference: Navarro et al. 1993; Pubmed- 7934931
|
Similar resistance genes in 'BacMet Predicted database' |
nikE | BacMet ID: BAC0274Code for: Binding protein
Family: ABC transporter superfamily. Nickel importer familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Nickel (Ni)Description: Nickel import ATP-binding protein NikE; Part of the ABC transporter complex NikABCDE involved in nickel import. Responsible for energy coupling to the transport system.
Length (amino acid): 268
Reference: Navarro et al. 1993; Pubmed- 7934931
|
Similar resistance genes in 'BacMet Predicted database' |
nikR | BacMet ID: BAC0275Code for: Regulator
Family: Transcriptional regulatory CopG/NikR familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Nickel (Ni)Description: Nickel-responsive regulator nikR; Transcriptional repressor of the nikABCDE operon. Is active in the presence of excessive concentrations of intracellular nickel.
Length (amino acid): 133
Reference: De Pina et al. 1999; Pubmed- 9882686, Contreras et al. 2003; Pubmed- 12890020
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Similar resistance genes in 'BacMet Predicted database' |
nirA | BacMet ID: BAC0276Code for: Membrane Transporter
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Klebsiella oxytocaLocation: Chromosome
Compound: Nickel (Ni)Description: Chromosomal nickel resistance determinant nirA. C-terminal of the nirA protien contains a histidine rich region tat might possess high affinity to nickel.
Length (amino acid): 356
Reference: Park et al. 2008; Pubmed- 18600044
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Similar resistance genes in 'BacMet Predicted database' |
nirB | BacMet ID: BAC0277Code for: Regulator
Family: Transcriptional repressor metal familySequence: FASTA
Cross-database IDs: Link
Organism: Klebsiella oxytocaLocation: Chromosome
Compound: Nickel (Ni)Description: Chromosomal nickel resistance determinant nirB. It has 98% amino acid sequence similarity to chromosomal ncrB.
Length (amino acid): 89
Reference: Park et al. 2008; Pubmed- 18600044
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Similar resistance genes in 'BacMet Predicted database' |
nirC | BacMet ID: BAC0278Code for: Membrane Transporter
Family: NicO transporter familySequence: FASTA
Cross-database IDs: Link
Organism: Klebsiella oxytocaLocation: Chromosome
Compound: Nickel (Ni)Description: Chromosomal nickel resistance determinant nirC. It is a memebrane protein like ABC-type transport proteins and also possess a histidine rich region with high affinity for nickel binding.
Length (amino acid): 307
Reference: Park et al. 2008; Pubmed- 18600044
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Similar resistance genes in 'BacMet Predicted database' |
nirD | BacMet ID: BAC0279Code for: Regulator
Family: Bacterial OB fold (BOF) protein familySequence: FASTA
Cross-database IDs: Link
Organism: Klebsiella oxytocaLocation: Chromosome
Compound: Nickel (Ni)Description: Chromosomal nickel resistance determinant nirD; has 75% amino acid sequence similarity to chromomosomal ncrY.
Length (amino acid): 164
Reference: Park et al. 2008; Pubmed- 18600044
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Similar resistance genes in 'BacMet Predicted database' |
nixA | BacMet ID: BAC0280Code for: Enzyme
Family: NiCo transporter familySequence: FASTA
Cross-database IDs: Link
Organism: Helicobacter pylori (strain ATCC 700392 / 26695) (Campylobacter pylori)Location: Plasmid pRHL2 (Rhodococcus sp. (strain RHA1))
Compound: Nickel (Ni)Description: High-affinity nickel intake protein nixA. Imports nickel ions in an energy-dependent fashion. Necessary for the Expression of catalytically active urease.
Length (amino acid): 331
Reference: Mobley et al. 1995; Pubmed- 7651142
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Similar resistance genes in 'BacMet Predicted database' |
nmtR | BacMet ID: BAC0281Code for: Regulator
Family: ArsR-SmtB familySequence: FASTA
Cross-database IDs: Link
Organism: Mycobacterium tuberculosisLocation: Chromosome
Compound: Nickel (Ni), Cadmium (Cd), Lead (Pb)Description: Represses transcription of ctpJ/nmtA, by binding to its promoter region
Length (amino acid): 120
Reference: Cavet et al. 2002; Pubmed- 12163508
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Similar resistance genes in 'BacMet Predicted database' |
norA | BacMet ID: BAC0282Code for: Efflux
Family: Major facilitator superfamily (MFS), TCR/tet familySequence: FASTA
Cross-database IDs: Link
Organism: Staphylococcus aureusLocation: Chromosome
Compound: Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Acriflavine [class: Acridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Crystal Violet [class: Triarylmethane], Dequalinium [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine] , Pentamidine [class: Diamidine], Pyronin Y [class: Xanthene], Rhodamine 6G [class: Xanthene], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)]Description: Quinolone resistance protein norA, Involved in quinolone resistance. May constitute a membrane-associated active efflux pump of hydrophilic quinolones.
Length (amino acid): 388
Reference: Yoshida et al. 1990; Pubmed- 2174864, Huet et al. 2008; Pubmed- 18832320
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Similar resistance genes in 'BacMet Predicted database' |
norB | BacMet ID: BAC0283Code for: Efflux
Family: Major facilitator superfamily (MFS), TCR/tet familySequence: FASTA
Cross-database IDs: Link
Organism: Staphylococcus aureus (strain MW2)Location: Chromosome
Compound: Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)]Description: Quinolone resistance protein norB, Multidrug efflux pump that acts independently of norA and is one of the factors that confers resistance against diverse quinolones and chemical compounds By similarity. Can facilitate bacterial survival in vivo when overexpressed in an abscess and may contribute to the relative resistance of staphylococcal abscesses to antimicrobial therapy
Length (amino acid): 463
Reference: Ding et al. 2008; Pubmed- 18723624
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Similar resistance genes in 'BacMet Predicted database' |
norM/pmpM | BacMet ID: BAC0284Code for: Efflux
Family: Multi antimicrobial extrusion (MATE) familySequence: FASTA
Cross-database IDs: Link
Organism: Only gram -ve, N. gonorrhoeae, N. meningitidis, Burkholderia vietnamiensisLocation: Chromosome
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)]Description: Multidrug resistance protein NorM, inner cell-membrane, Multidrug efflux pump. Confers probably resistance to the cationic peptide polymyxin B (PMB).
Length (amino acid): 462
Reference: Fehlner-Gardiner et al. 2002; Pubmed- 1239904
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Similar resistance genes in 'BacMet Predicted database' |
nreB | BacMet ID: BAC0285Code for: Enzyme
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Acromobacter xylosoxidans 31A, Synechocystis spp.Location: Plasmid pMOL30 (Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)),
Compound: Cobalt (Co), Nickel (Ni)Description: Nickel resistance protein nreB (also known as nrsD or entS); nickel permease involved in nickel and cobalt tolerance. The histidine-rich C-terminal region of the nreB is not essential but contributes to maximal Ni(II) resistance.
Length (amino acid): 416
Reference: Grass et al. 2001; Pubmed- 11292799
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Similar resistance genes in 'BacMet Predicted database' |
nrsA | BacMet ID: BAC0286Code for: Membrane Transporter
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Synechocystis sp. (strain PCC 6803 / Kazusa)Location: Chromosome
Compound: Nickel (Ni)Description: Cation or drug efflux system protein nrsA
Length (amino acid): 1054
Reference: Garcia-Dominquez et al. 2000; Pubmed- 10692354
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Similar resistance genes in 'BacMet Predicted database' |
nrsD/nreB | BacMet ID: BAC0287Code for: Enzyme
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Acinetobacter calcoaceticus (strain PHEA-2), Synechocystis sp. (strain PCC 6803 / Kazusa)Location: Chromosome
Compound: Nickel (Ni), Cobalt (Co)Description: nrsD gene encodes a Ni(II) permease whose carboxy-terminal region is a metal binding domain; nickel permease involved in nickel and cobalt tolerance
Length (amino acid): 445
Reference: Garcia-Dominquez et al. 2000; Pubmed- 10692354
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Similar resistance genes in 'BacMet Predicted database' |
nrsR | BacMet ID: BAC0288Code for: Regulator
Family: Contains 1 response regulatory domainSequence: FASTA
Cross-database IDs: Link
Organism: Synechocystis sp. (strain PCC 6803 / GT-S)Location: Chromosome
Compound: Nickel (Ni)Description: OmpR subfamily protein NrsR/RppA/Rre33
Length (amino acid): 234
Reference: Lopez-Maury et al. 2002; Pubmed- 11849552
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Similar resistance genes in 'BacMet Predicted database' |
nrsS | BacMet ID: BAC0289Code for: Enzyme
Family: Contains 1 histidine kinase domainSequence: FASTA
Cross-database IDs: Link
Organism: Synechocystis sp. (strain PCC 6803 / GT-S)Location: Chromosome
Compound: Nickel (Ni)Description: Sensory transduction histidine kinase NrsS/RppB/Hik30
Length (amino acid): 454
Reference: Lopez-Maury et al. 2002; Pubmed- 11849552
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Similar resistance genes in 'BacMet Predicted database' |
opmD/nmpC | BacMet ID: BAC0290Code for: Porin
Family: Gram-negative porin familySequence: FASTA
Cross-database IDs: Link
Organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)Location: Chromosome
Compound: Methyl Viologen [class: Paraquat]Description: Outer membrane porin protein OmpD; Forms pores that allow passive diffusion of small molecules across the outer membrane
Length (amino acid): 362
Reference: Santiviago et al. 2002; Pubmed- 12410826, Hongo et al. 1994; Pubmed- 7926834
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Similar resistance genes in 'BacMet Predicted database' |
oprJ | BacMet ID: BAC0291Code for: Efflux
Family: RND Superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosa (strain ATCC 15692/PAO1/1C/PRS 101/LMG 12228)Location: Chromosome
Compound: Triclosan [class: Phenolic compounds], n-hexane [class: Alkane], p-xylene [class: Aromatic hydrocarbons]Description: Outer membrane protein oprJ, Channel-forming component of a multidrug resistance efflux pump. Part of the MexCD-OprJ efflux operon.
Length (amino acid): 479
Reference: Li et al. 1998; Pubmed- 9603892, Poole et al. 1996; Pubmed- 8878035
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Similar resistance genes in 'BacMet Predicted database' |
oprM/oprK | BacMet ID: BAC0292Code for: Efflux
Family: RND Superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosaLocation: Chromosome
Compound: n-hexane [class: Alkane], p-xylene [class: Aromatic hydrocarbons]Description: Outer membrane protein OprM; The outer membrane component of the mexAB-oprM efflux system that confers multidrug resistance. Also functions as the major efflux pump for n-hexane and p-xylene efflux. Over-Expression of the pump increases antibiotic and solvent efflux capacities. Can replace the oprJ outer membrane component of the mexCD-oprJ pump; the antibiotics Exported are those Exported by the intact mexCD pump, showing that efflux substrate specificity is not conferred by this component. Serves as the outer membrane component for the mexXY efflux system. Implicated in the secretion of the siderophore pyoverdine. OprM is probably involved in the efflux of the siderophore across the outer membrane, The ability to Export antibiotics and solvents is dramatically decreased in the presence of the proton conductor carbonyl cyanide m-chlorophenylhydrazone (CCCP), showing that an energized inner membrane is required for efflux. It is thought that the mexB subunit is a proton antiporter
Length (amino acid): 485
Reference: Li et al. 1995; Pubmed- 8540696, Li et al. 1998; Pubmed- 9603892
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Similar resistance genes in 'BacMet Predicted database' |
oprN | BacMet ID: BAC0562Code for: Efflux
Family: RND Superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosa (strain ATCC 15692/PAO1/1C/PRS 101/LMG 12228)Location: Chromosome
Compound: Triclosan [class: Phenolic compounds], n-hexane [class: Alkane], p-xylene [class: Aromatic hydrocarbons]Description: Multidrug efflux outer membrane protein OprN; part of the mexEF-oprN multidrug efflux system of Pseudomonas aeruginosa.
Length (amino acid): 472
Reference: Li et al. 1998; Pubmed- 9603892, Kohler et al. 1997; Pubmed- 9044268
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Similar resistance genes in 'BacMet Predicted database' |
oqxA | BacMet ID: BAC0294Code for: Enzyme
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coliLocation: Plasmid p0LA52 (E. coli), Plasmid pGDGK3 (Klebsiella pneumoniae)
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Clorine Dioxide (ClO2) [class: Halogens], Triclosan [class: Phenolic compounds], Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Acriflavine [class: Acridine]Description: RND family multidrug efflux permease oqxA; part of oqxAB efflux system, can co-select antibiotics such as Chloramphenicol, Ciprofloxacin, nofloxacin, trimethoprim etc. oqxAB efflux system is dependent on the host TolC outer membrane protein when expressed in E. coli.
Length (amino acid): 391
Reference: Hansen et al. 2007; Pubmed- 17526501
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Similar resistance genes in 'BacMet Predicted database' |
oqxB | BacMet ID: BAC0295Code for: Enzyme
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coliLocation: Plasmid pOLA52 (E. coli),
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Clorine Dioxide (ClO2) [class: Halogens], Triclosan [class: Phenolic compounds], Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Acriflavine [class: Acridine]Description: RND family multidrug efflux permease oqxB; part of the oqxAB efflux system; can co-select antibiotics such as Chloramphenicol, Ciprofloxacin, nofloxacin, trimethoprim etc. oqxAB efflux system is dependent on the host TolC outer membrane protein when expressed in E. coli.
Length (amino acid): 1050
Reference: Hansen et al. 2007; Pubmed- 17526501
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Similar resistance genes in 'BacMet Predicted database' |
oscA | BacMet ID: BAC0358Code for: Binding protein
Family: UnknownSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas corrugata 28Location: Chromosome
Compound: Chromium (Cr), Dodine [class: Acetate]Description: oscA gene involved in the sulphur starvation response and in Cr(VI) resistance in Pseudomonas corrugata 28. oscA is located upstream of a gene cluster that encodes the components of the sulphate ABC transporter, and it forms a single transcriptional unit with sbp, which encodes the periplasmic sulphate-binding protein. It has been shown that oscA is essential for the utilization of various organosulphur compounds and that it induces upregulation of the cysTWA operon under conditions of chromate exposure. oscA may also have a regulatory role in the sulphur starvation response, but the exact mechanism through which it acts is not well understood.
Length (amino acid): 60
Reference: Viti et al. 2009; Pubmed- 19118350
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Similar resistance genes in 'BacMet Predicted database' |
ostA/lptD | BacMet ID: BAC0296Code for: Porin
Family: LptD familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: n-hexane [class: Alkane]Description: Organic solvent tolerance protein ostA/lptD; Together with LptE, is involved in the assembly of LPS in the outer leaflet of the outer membrane. Determines N-hexane tolerance and is involved in outer membrane permeability. Essential for envelope biogenesis
Length (amino acid): 784
Reference: Aono et al. 1994; Pubmed- 7811102
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Similar resistance genes in 'BacMet Predicted database' |
oxyRkp | BacMet ID: BAC0536Code for: Regulator
Family: LysR-familySequence: FASTA
Cross-database IDs: Link
Organism: Klebsiella pneumoniae NTUH-K2044Location: Chromosome
Compound: Hydrogen Peroxide (H2O2) [class: Peroxides], Sodium Deoxycholate (SDC) [class: Acid], Acriflavine [class: Acridine], Rhodamine 6G [class: Xanthene], Ethidium Bromide [class: Phenanthridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate]Description: Activator of hydrogen peroxide-inducible genes. It has contributory role towards varied stress tolerance in K. pneumoniae.
Length (amino acid): 305
Reference: Srinivasan et al. 2013; Pubmed- 23619002
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Similar resistance genes in 'BacMet Predicted database' |
PA0320 | BacMet ID: BAC0297Code for: Unknown
Family: Bacterial OB fold (BOF) protein familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)Location: Chromosome
Compound: Cadmium (Cd), Mercury (Hg), Tributyltin (TBT) [class: Organo-tin], Hydrogen Peroxide (H2O2) [class: Peroxides], Hydrochloric acid (HCl) [class: Acid]Description: TBT resistance gene PA0320; homologous to YgiW; PA0320 plays a certain role in stress tolerance against TBT as well as in stressors producing reactive oxygen species
Length (amino acid): 116
Reference: Fukushima et al. 2012; Pubmed- 22990488
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Similar resistance genes in 'BacMet Predicted database' |
pbrA | BacMet ID: BAC0298Code for: Enzyme
Family: Cation transport ATPase (P-type) familySequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839)Location: Plasmid pMOL30 (Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839), Plasmid pLVPK (Klebsiella pneumoniae)
Compound: Lead (Pb)Description: pbrA, a P-type ATPase (involved in efflux); involved in Pb(II) resistance; part of the lead resistance determinant pbr operon (pbrABCD) which combines functions involved in uptake, efflux, and accumulation of Pb(II)
Length (amino acid): 799
Reference: Borremans et al. 2001; Pubmed- 11544228
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Similar resistance genes in 'BacMet Predicted database' |
pbrB/pbrC | BacMet ID: BAC0299Code for: Enzyme
Family: Peptidase A8 familySequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839)Location: Plasmid pMOL30 (Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839)), Plasmid pLVPK (Klebsiella pneumoniae)
Compound: Lead (Pb)Description: Lipoprotein signal peptidase 3 (pbrB); a predicted integral membrane protein and a putative signal peptidase (involved in efflux); part of the lead resistance determinant pbr operon (pbrABCD) which combines functions involved in uptake, efflux, and accumulation of Pb(II)
Length (amino acid): 358
Reference: Borremans et al. 2001; Pubmed- 11544228
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Similar resistance genes in 'BacMet Predicted database' |
pbrD | BacMet ID: BAC0300Code for: Binding protein
Family: UnknownSequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839)Location: Plasmid pMOL30 (Ralstonia metallidurans (strain CH34/ATCC 43123/DSM 2839))
Compound: Lead (Pb)Description: PbrD, Pb(II) binding protein involved in Pb(II) resistance; a intracellular Pb binding protein (involved in Pb++ accumulation); function as a chaperone for Pb(II) or involved in Pb(II) sequestration ; PbrD is not absolutely required for Pb(II) resistance, but cells lacking PbrD show a decreased accumulation of Pb(II); part of the lead resistance determinant pbr operon (pbrABCD) which combines functions involved in uptake, efflux, and accumulation of Pb(II)
Length (amino acid): 289
Reference: Borremans et al. 2001; Pubmed- 11544228
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Similar resistance genes in 'BacMet Predicted database' |
pbrR | BacMet ID: BAC0301Code for: Regulator
Family: MerR familySequence: FASTA
Cross-database IDs: Link
Organism: Herbaspirillum seropedicae (strain SmR1)Location: Plasmid pLVPK (Klebsiella pneumoniae), Plasmid pMOL30 (Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839))
Compound: Lead (Pb)Description: A transcription factor, pbrR belonging to the merR family
Length (amino acid): 150
Reference: Borremans et al. 2001; Pubmed- 11544228
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Similar resistance genes in 'BacMet Predicted database' |
pbrT | BacMet ID: BAC0302Code for: Membrane Transporter
Family: Contains 1 cytochrome C domainSequence: FASTA
Cross-database IDs: Link
Organism: Alcaligenes xylosoxydans xylosoxydansLocation: Plasmid pA81
Compound: Lead (Pb)Description: A lead (Pb++) uptake protein PbrT
Length (amino acid): 630
Reference: Borremans et al. 2001; Pubmed- 11544228
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Similar resistance genes in 'BacMet Predicted database' |
pcm | BacMet ID: BAC0506Code for: Enzyme
Family: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) familySequence: FASTA
Cross-database IDs: Link
Organism: Stenotrophomonas maltophilia (strain K279a)Location: Chromosome
Compound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Carbonyl cyanide 3-chlorophenylhydrazone (CCCP) [class: Hydrazone], Acriflavine [class: Acridine]Description: Protein-L-isoaspartate O-methyltransferase. pcm and tolCsm genes form an operon. pcm deletion affects on the expression of tolCsm. pcm alone makes little contribution to resistance.
Length (amino acid): 215
Reference: Huang et al. 2013; Pubmed- 23629016
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Similar resistance genes in 'BacMet Predicted database' |
pcoA | BacMet ID: BAC0303Code for: Enzyme
Family: Multi-copper oxidase family (CopA subfamily)Sequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coliLocation: Plasmid pRJ1004
Compound: Copper (Cu)Description: Copper resistance protein PcoA; required for the copper-inducible expression of copper resistance. May have oxidase activity; part of the copper resistance determinant system (pcoABCDRSE)
Length (amino acid): 605
Reference: Brown et al. 1995; Pubmed- 8594334
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Similar resistance genes in 'BacMet Predicted database' |
pcoB | BacMet ID: BAC0304Code for: Enzyme
Family: CopB familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coliLocation: Plasmid pRJ1004
Compound: Copper (Cu)Description: Copper resistance protein PcoB; required for the copper-inducible expression of copper resistance; located in cell outer membrane; it's peripheral membrane protein
Length (amino acid): 296
Reference: Brown et al. 1995; Pubmed- 8594334
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Similar resistance genes in 'BacMet Predicted database' |
pcoC | BacMet ID: BAC0305Code for: Binding protein
Family: CopC familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coliLocation: Plasmid pRJ1004
Compound: Copper (Cu)Description: Copper resistance protein PcoC; required for the copper-inducible expression of copper resistance; located in periplasm; part of the copper resistance determinant system (pcoABCDRSE)
Length (amino acid): 126
Reference: Brown et al. 1995; Pubmed- 8594334
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Similar resistance genes in 'BacMet Predicted database' |
pcoD | BacMet ID: BAC0306Code for: Membrane Transporter
Family: CopD familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coliLocation: Plasmid pRJ1004
Compound: Copper (Cu)Description: Copper resistance protein D; Required for the copper-inducible expression of copper resistance; part of the copper resistance determinant system (pcoABCDRSE)
Length (amino acid): 309
Reference: Brown et al. 1995; Pubmed- 8594334
|
Similar resistance genes in 'BacMet Predicted database' |
pcoE | BacMet ID: BAC0307Code for: Binding protein
Family: UnknownSequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coliLocation: Plasmid pRJ1004
Compound: Copper (Cu), Silver (Ag)Description: Copper-binding protein PcoE; lies distal, downstram from the regulatory genes (gene order in the operon- pcoABCDRSE); Required for the copper-inducible Expression of copper resistance. Activated by the two-component regulatory system CusS/CusR; part of the copper resistance determinant system (pcoABCDRSE)
Length (amino acid): 144
Reference: Brown et al. 1995; Pubmed- 8594334
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Similar resistance genes in 'BacMet Predicted database' |
pcoR | BacMet ID: BAC0308Code for: Regulator
Family: Contains 1 response regulatory domainSequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coliLocation: Plasmid pRJ1004
Compound: Copper (Cu)Description: Transcriptional regulatory protein PcoR; member of a two-component regulatory system pcoS/pcoR. Involved in the activation of copper resistance gene operon pcoABCD by binding to a specific site on the cop operon promoter (copper box). part of the copper resistance determinant system (pcoABCDRSE)
Length (amino acid): 226
Reference: Rouch & Brown. 1997; Pubmed- 9141682
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Similar resistance genes in 'BacMet Predicted database' |
pcoS | BacMet ID: BAC0309Code for: Regulator
Family: Contains 1 HAMP domain, 1 histidine kinase domainSequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coliLocation: Plasmid pRJ1004
Compound: Copper (Cu)Description: Sensor protein PcoS; member of a two-component regulatory system PcoS/PcoR. Activate PcoR by phosphorylation; part of the copper resistance determinant system (pcoABCDRSE)
Length (amino acid): 466
Reference: Brown et al. 1995; Pubmed- 8594334
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Similar resistance genes in 'BacMet Predicted database' |
pdrM | BacMet ID: BAC0481Code for: Efflux
Family: MATE familySequence: FASTA
Cross-database IDs: Link
Organism: Streptococcus pneumoniaeLocation: Chromosome
Compound: Acriflavine [class: Acridine], 4,6-diamidino-2-phenylindole (DAPI) [class: Diamindine]Description: It is a Na(+)/drug antiporter in Streptococcus pneumoniae
Length (amino acid): 453
Reference: Hashimoto et al. 2013; Pubmed- 23555691
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Similar resistance genes in 'BacMet Predicted database' |
perO | BacMet ID: BAC0612Code for: Enzyme
Family: ArsB/NhaD permeases familySequence: FASTA
Cross-database IDs: Link
Organism: Rhodobacter capsulatusLocation: Chromosome
Compound: Molybdenum (Mo), Tungsten (W), Vanadium (V)Description: PerO is involved in molybdate uptake. In addition to importing molybdate, PerO probably importssulfate, tungstate, and vanadate.
Length (amino acid): 595
Reference: Gisin et al. 2010; Pubmed- 20851900
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Similar resistance genes in 'BacMet Predicted database' |
perR | BacMet ID: BAC0310Code for: Regulator
Family: Fur familySequence: FASTA
Cross-database IDs: Link
Organism: Staphylococcus aureus (strain NCTC 8325)Location: Chromosome
Compound: Hydrogen Peroxide (H2O2) [class: Peroxides]Description: Peroxide-responsive repressor PerR; Manganese-dependent repressor that controls a regulon of oxidative stress resistance and iron-storage proteins. Regulates expression of genes encoding antioxidant proteins, such as katA, ahpCF, bcp and trxB. Also regulates expression of the iron-storage protein ftn, the ferritin-like protein mrgA, the ferric uptake regulator fur, the manganese transporter operon mntABC, and its own expression. May act as a hydrogen peroxide and organic hydroperoxide sensor. Required for full virulence in a murine skin abscess model of infection
Length (amino acid): 148
Reference: Horsburgh et al. 2001; Pubmed- 11349039
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Similar resistance genes in 'BacMet Predicted database' |
pfr | BacMet ID: BAC0497Code for: Binding protein
Family: Ferritin familySequence: FASTA
Cross-database IDs: Link
Organism: Helicobacter pyloriLocation: Chromosome
Compound: Iron (Fe), Copper (Cu), Manganese (Mn)Description: pfr gene encodes ferritin protein. Has role in iron metabolism of H. pylori. Binding and sequestration of metals by Pfr is not specific for iron. Iron resistance mediated by ferritin might be important for survival of the pathogen within its natural habitat, where it is faced with iron and other metals which originate from the diet.
Length (amino acid): 167
Reference: Bereswill et al. 1998; Pubmed- 9782498
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Similar resistance genes in 'BacMet Predicted database' |
pgpA/ltpgpA | BacMet ID: BAC0311Code for: Enzyme
Family: ABC transporter superfamily. ABCB familySequence: FASTA
Cross-database IDs: Link
Organism: Leishmania tarentolae (Sauroleishmania tarentolae)Location: Chromosome
Compound: Arsenic (As), Antimony (Sb)Description: Multidrug resistance protein PgpA
Length (amino acid): 1548
Reference: Papadopoulou et al. 1994; Pubmed- 7909316, Callahan et al. 1994; Pubmed- 7891738
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Similar resistance genes in 'BacMet Predicted database' |
phoB | BacMet ID: BAC0530Code for: Regulator
Family: Contains 1 histidine kinase domainSequence: FASTA
Cross-database IDs: Link
Organism: Klebsiella pneumoniae NTUH-K2044Location: Chromosome
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides]Description: Part of the two-component regulatory system PhoBR. It regulates kpnO in K. pneumoniae. It has a role in role in capsule production and bacterial growth in K. pneumoniae. It has no role in oxidative stress tolerance and nitrostative stress tolernace, but in gastrointestinal like challenges. (NB: THIS GENE IS MORE LIKELY TO BE 'PhoP' THOUGH AUTHORS MENTIONED IT AS 'PhoB'. THE SYSTEM MIGHT BE 'PhoPQ' INSTEAD OF 'PhoBR'.)
Length (amino acid): 237
Reference: Srinivasan et al. 2012; Pubmed- 22848515
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Similar resistance genes in 'BacMet Predicted database' |
phoR | BacMet ID: BAC0531Code for: Regulator
Family: Contains 1 response regulator domainSequence: FASTA
Cross-database IDs: Link
Organism: Klebsiella pneumoniae NTUH-K2044Location: Chromosome
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides]Description: Part of the two-component regulatory system PhoBR. It regulates kpnO in K. pneumoniae. It has a role in role in capsule production and bacterial growth in K. pneumoniae. It has no role in oxidative stress tolerance and nitrostative stress tolernace, but in gastrointestinal like challenges.
Length (amino acid): 488
Reference: Srinivasan et al. 2012; Pubmed- 22848515
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Similar resistance genes in 'BacMet Predicted database' |
pitA | BacMet ID: BAC0312Code for: Porter
Family: Inorganic-Phospahte Transporter (PiT) family, Pit subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Zinc (Zn), Tellurium (Te)Description: Low-affinity inorganic phosphate transporter 1, PitA; Can also transport arsenate
Length (amino acid): 499
Reference: Elias et al. 2012; Pubmed- 23189244, Willsky & Malamy 1980; Pubmed- 6998959, Beard et al. 2000; Pubmed- 10713426
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Similar resistance genes in 'BacMet Predicted database' |
pmpM | BacMet ID: BAC0313Code for: Efflux
Family: Member of the MATE family of transportersSequence: FASTA
Cross-database IDs: Link
Organism: Only gram -ve, Pseudomonas aeruginosaLocation: Chromosome
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Acriflavine [class: Acridine]Description: Multidrug resistance protein PmpM, Multidrug efflux pump that functions as an H+/drug antiporter. Confers resistance to benzylkonium chloride (BAC), fluoroquinolones, ethidium bromide, Acriflavine and tetraphenylphosphonium chloride.
Length (amino acid): 477
Reference: He et al. 2004; Pubmed- 14679249
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Similar resistance genes in 'BacMet Predicted database' |
pmrA | BacMet ID: BAC0314Code for: Efflux
Family: Major facilitator superfamily. TCR/tet familySequence: FASTA
Cross-database IDs: Link
Organism: Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)Location: Chromosome
Compound: Acriflavine [class: Acridine], Ethidium Bromide [class: Phenanthridine]Description: Multi-drug resistance efflux pump PmrA; Efflux pump for various substrates. It is associated with fluoroquinolone resistance in Streptococcus pneumoniae.
Length (amino acid): 399
Reference: Gill et al. 1999; Pubmed- 9869592
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Similar resistance genes in 'BacMet Predicted database' |
pmrA | BacMet ID: BAC0487Code for: Regulator
Family: Contains response regulatory domainSequence: FASTA
Cross-database IDs: Link
Organism: Erwinia carotovora ssp. CarotovoraLocation: Chromosome
Compound: Iron (Fe)Description: Member of the PmrA-PmrB two-component system required in regulation of virulence in bacteria. It is involved in controlling of bacterial response to external pH and iron and is crucial for bacterial virulence. PmrA-PmrB system is also required for resistance to the peptide antibiotic polymyxin B and other cationic antimicrobial peptides. It is activated in vivo by direct or indirect means and regulates genes that modify lipopolysaccharide, aiding survival in host (and non-host) environments. Unphosphorylated PmrA represses extracellular enzyme genes. Phosphorylation of PmrA by PmrB relieves such repression, which leads to activation of extracellular enzyme genes. Phosphorylated PmrA seems to repress expression of the pmrCAB operon.
Length (amino acid): 222
Reference: Hyytiainen et al. 2003; Pubmed- 14617142; Wosten et al. 2000; Pubmed- 11051552
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Similar resistance genes in 'BacMet Predicted database' |
pmrB | BacMet ID: BAC0488Code for: Regulator
Family: Contains a sensor kinase domainSequence: FASTA
Cross-database IDs: Link
Organism: Erwinia carotovora ssp. CarotovoraLocation: Chromosome
Compound: Iron (Fe)Description: Member of the PmrA-PmrB two-component system required in regulation of virulence in bacteria. Functions as a sensor protein kinase which is autophosphorylated at a histidine residue and transfers its phosphate group to PmrA in response to external pH and iron and is crucial for bacterial virulence. PmrA-PmrB system is also required for resistance to the peptide antibiotic polymyxin B and other cationic antimicrobial peptides. It is activated in vivo by direct or indirect means and regulates genes that modify lipopolysaccharide, aiding survival in host (and non-host) environments.
Length (amino acid): 364
Reference: Hyytiainen et al. 2003; Pubmed- 14617142, Wosten et al. 2000; Pubmed- 1105155
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Similar resistance genes in 'BacMet Predicted database' |
pmrC | BacMet ID: BAC0485Code for: Membrane protein
Family: Contains 1 sulfatase, 1 DUF1705 domainSequence: FASTA
Cross-database IDs: Link
Organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)Location: Chromosome
Compound: Iron (Fe)Description: Putative cytoplasmic membrane protein pmrC. PmrA-activated pmrC gene is required for Fe(III) resistance.
Length (amino acid): 548
Reference: Nishino et al. 2006; Pubmed- 16803591, Hyytiainen et al. 2003; Pubmed- 14617142
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Similar resistance genes in 'BacMet Predicted database' |
pmrG | BacMet ID: BAC0486Code for: Enzyme
Family: Phosphoglycerate mutase family. Ais subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)Location: Chromosome
Compound: Iron (Fe)Description: It is a phodphatase and catalyzes the dephosphorylation of heptose(II) of the outer membrane lipopolysaccharide core and localizes to the periplasm. Required for iron(III)+ resistance.
Length (amino acid): 201
Reference: Nishino et al. 2006; Pubmed- 16803591
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Similar resistance genes in 'BacMet Predicted database' |
pstA | BacMet ID: BAC0315Code for: Enzyme
Family: binding-protein-dependent transport system permease family. CysTW subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Arsenic (As)Description: An integral membrane protein. Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane.
Length (amino acid): 296
Reference: Willsky et al. 1980; Pubmed- 6998959, Willsky et al. 1980; Pubmed- 6998957, Surin et al. 1985; Pubmed- 3881386
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Similar resistance genes in 'BacMet Predicted database' |
pstB | BacMet ID: BAC0316Code for: Enzyme
Family: ABC transporter superfamily. Phospahte importer familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Arsenic (As)Description: Phosphate transporting ATPase; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system.
Length (amino acid): 257
Reference: Willsky et al. 1980; Pubmed- 6998959, Willsky et al. 1980; Pubmed- 6998957, Surin et al. 1985; Pubmed- 3881386
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Similar resistance genes in 'BacMet Predicted database' |
pstC | BacMet ID: BAC0317Code for: Enzyme
Family: Binding-protein-dependent transport system permease family. CysTW subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Arsenic (As)Description: An integral membrane permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane.
Length (amino acid): 319
Reference: Willsky et al. 1980; Pubmed- 6998959, Willsky et al. 1980; Pubmed- 6998957, Surin et al. 1985; Pubmed- 3881386
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Similar resistance genes in 'BacMet Predicted database' |
pstS | BacMet ID: BAC0318Code for: Binding protein
Family: PstS familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Arsenic (As)Description: A periplasmic phosphate binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import.
Length (amino acid): 346
Reference: Willsky et al. 1980; Pubmed- 6998959, Willsky et al. 1980; Pubmed- 6998957, Surin et al. 1984; Pubmed- 6321434
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Similar resistance genes in 'BacMet Predicted database' |
qacA | BacMet ID: BAC0319Code for: Efflux
Family: Major facilitator superfamily (MFS)Sequence: FASTA
Cross-database IDs: Link
Organism: Only gram +ve, Staphylococcus aureusLocation: Plasmid VRSAp, pSK1 (S. Aureus)
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Chlorhexidine [class: Biguanides], Cetylpyridinium Chloride (CPC) [class: Quaternary Ammonium Compounds (QACs)], Crystal Violet [class: Triarylmethane], Pyronin Y [class: Xanthene], Quinaldine red [class: Quinolines], Rhodamine 6G [class: Xanthene], Safranin O [class: Azin], Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Alexidine [class: Biguanides], Amicarbalide [class: Diamidine], Pentamidine [class: Diamidine], Hexamidine [class: Diamidine], Propamidine [class: Diamidine], Diamidinodiphenylamine [class: Diamidine], Dibrompropamidine [class: Diamidine], 1a-62/JC-1-127 [class: Guanylhydrazones], 1i-39/JC-1-134 [class: Guanylhydrazones], Stilbamidine [class: Diamidine], Phenamidine [class: Diamidine], Diminazene [class: Diamidine]Description: Antiseptic resistnce gene qacA; Confers export-mediated resistance against antiseptic and disinfectant compounds such as intercalating dyes, quaternary ammonium salts and diamidines. qacA and qacB are different in sequence similarities by just by 7 nucleotides.
Length (amino acid): 514
Reference: Tennent et al 1989; Pubmed- 2778425, Rouch et al. 1990; Pubmed- 2089219, Paulsen et al. 1996; Pubmed- 8622987, Mitchell et al. 1998; Pubmed- 9527814
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Similar resistance genes in 'BacMet Predicted database' |
qacB | BacMet ID: BAC0320Code for: Efflux
Family: Major facilitator superfamily (MFS)Sequence: FASTA
Cross-database IDs: Link
Organism: Only gram +ve, Staphylococcus aureusLocation: Plasmid pTZ2162 (S. Aureus)
Compound: Ethidium Bromide [class: Phenanthridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Pentamidine [class: Diamidine], Propamidine [class: Diamidine], Diaminodiphenylamine [class: Diamidine], Amicarbalide [class: Diamidine], Hexamidine [class: Diamidine], Stilbamidine [class: Diamidine], 1i-39/JC-1-134 [class: Guanylhydrazones], 1a-62/JC-1-127 [class: Guanylhydrazones]Description: Antiseptic efflux pump qacB. qacA and qacB are different in sequence similarities by just by 7 nucleotides.
Length (amino acid): 514
Reference: Alam et al. (2003), Pubmed- 12820795, Nakaminami, H. et al. (2008); Littlejon et al. 1992; Pubmed- 1526458, Paulsen et al. 1996; Pubmed- 8622987, Mitchell et al. 1998; Pubmed- 9527814
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Similar resistance genes in 'BacMet Predicted database' |
qacC/qacD/smr | BacMet ID: BAC0321Code for: Efflux
Family: Small multidrug resistance (SMR) familySequence: FASTA
Cross-database IDs: Link
Organism: Staphylococcus aureusLocation: Plasmid pTZ20, pWBG32, pTZ22, pKH8
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Pyronin Y [class: Xanthene], Rhodamine 6G [class: Xanthene], Crystal Violet [class: Triarylmethane], Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Cetylpyridinium Chloride (CPC) [class: Quaternary Ammonium Compounds (QACs)], Dequalinium [class: Quaternary Ammonium Compounds (QACs)]Description: Quaternary ammonium compound-resistance protein QacC (also called as QacD or smr); Multidrug exporter. Is implicated for the resistance to bacteriocidal quaternary ammonium compounds and ethidium bromide. It confers resistance to toxic organic cations via proton-dependent export.
Length (amino acid): 107
Reference: Paulsen et al. 1995; Pubmed- 7751293, Paulsen et al. 1993; Pubmed- 8494372
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Similar resistance genes in 'BacMet Predicted database' |
qacE | BacMet ID: BAC0322Code for: Efflux
Family: Small multidrug resistance (SMR) familySequence: FASTA
Cross-database IDs: Link
Organism: Only gram -ve, Escherichia coli, K. pneumoniae, Pseudomonas aeruginosaLocation: Plasmid IncP-beta R751 (E. coli), Plasmid IncP-beta R751 (Enterobacter aerogenes)
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Pyronin Y [class: Xanthene], Rhodamine 6G [class: Xanthene], Crystal Violet [class: Triarylmethane], Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Cetylpyridinium Chloride (CPC) [class: Quaternary Ammonium Compounds (QACs)], Dequalinium [class: Quaternary Ammonium Compounds (QACs)]Description: Quaternary ammonium compound-resistance protein qacE, Multidrug exporter. It is implicated for the resistance to bacteriocidal quaternary ammonium compounds.
Length (amino acid): 110
Reference: Paulsen et al. 1993; Pubmed- 8494372
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Similar resistance genes in 'BacMet Predicted database' |
qacEdelta1 | BacMet ID: BAC0323Code for: Efflux
Family: Small multidrug resistance (SMR) familySequence: FASTA
Cross-database IDs: Link
Organism: Both gram +ve and -ve , Staphylococcus aureus, E. faecalis, P .aeruginosaLocation: Plasmid Rms149, In786, R388-R151 hybrid , pOZ176 , pKM0509, R1033, pKLC102, pLQ1001
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Chlorhexidine [class: Biguanides], Pyronin Y [class: Xanthene], Rhodamine 6G [class: Xanthene], Methyl Viologen [class: Paraquat], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], 4,6-diamidino-2-phenylindole (DAPI) [class: Diamindine], Acridine Orange [class: Acridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Deoxycholate (SDC) [class: Acid], Crystal Violet [class: Triarylmethane], Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Cetylpyridinium Chloride (CPC) [class: Quaternary Ammonium Compounds (QACs)], Dequalinium [class: Quaternary Ammonium Compounds (QACs)]Description: Disinfectant resistance protein QacEdelta 1. It can confer resistance to antibiotics as well such as erythromycin, novomycin, amikacin, ciprofloxacin, norfloxacin, tetracycline, trimethoporin etc.
Length (amino acid): 115
Reference: Kazama et al. 1999; Pubmed- 10339831, Paulsen et al. 1993; Pubmed- 8494372
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Similar resistance genes in 'BacMet Predicted database' |
qacF | BacMet ID: BAC0324Code for: Efflux
Family: Small multidrug resistance (SMR) familySequence: FASTA
Cross-database IDs: Link
Organism: Only gram -ve, E. aerogenes, E. cloacaeLocation: Plasmid pIP833 (E. aerogenes)
Compound: Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)]Description: Quaternary ammonium compound-resistance protein qacF, Multidrug exporter. Is implicated for the resistance to bacteriocidal quaternary ammonium compounds
Length (amino acid): 110
Reference: Ploy et al. 1998; Pubmed- 9756755
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Similar resistance genes in 'BacMet Predicted database' |
qacG | BacMet ID: BAC0325Code for: Efflux
Family: Small multidrug resistance (SMR) familySequence: FASTA
Cross-database IDs: Link
Organism: both gram +ve (s. aureus) and gram -ve (p.aeruginosa, A. salmonicida)Location: Plasmid pST94 (Staphylococcus spp.)
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine]Description: Quaternary ammonium compound-resistance protein qacG, Multidrug exporter. Is implicated for the resistance to bacteriocidal quaternary ammonium compounds
Length (amino acid): 107
Reference: Heir et al. 1997; Pubmed- 10196743
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Similar resistance genes in 'BacMet Predicted database' |
qacH/qacI | BacMet ID: BAC0326Code for: Efflux
Family: Small multidrug resistance (SMR) familySequence: FASTA
Cross-database IDs: Link
Organism: only gram +ve, Staphylococcus aureusLocation: Plasmid pST2H6 ( Staphylococcus saprophyticus)
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Proflavin [class: Acridine]Description: Quaternary ammonium compound-resistance protein qacH (also known as qacI), Multidrug exporter. Is implicated for the resistance to bacteriocidal quaternary ammonium compounds.
Length (amino acid): 107
Reference: Heir et al. 1998; Pubmed- 9631545
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Similar resistance genes in 'BacMet Predicted database' |
qacJ | BacMet ID: BAC0327Code for: Efflux
Family: Small multidrug resistance (SMR) familySequence: FASTA
Cross-database IDs: Link
Organism: only gram +ve, Staphylococcus spp.Location: Plasmid pNVH01(S. aureus)
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)]Description: Multidrug efflux protein QacJ
Length (amino acid): 107
Reference: Bjorland et al. 2003; Pubmed- 14506007
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Similar resistance genes in 'BacMet Predicted database' |
qacR | BacMet ID: BAC0328Code for: Regulator
Family: Contains 1 HTH tetR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Staphylococcus aureusLocation: Plasmid pSK1 (S. aureus)
Compound: Chlorhexidine [class: Biguanides], Cetylpyridinium Chloride (CPC) [class: Quaternary Ammonium Compounds (QACs)], Dequalinium [class: Quaternary Ammonium Compounds (QACs)], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Pentamidine [class: Diamidine], Propamidine [class: Diamidine], Diaminodiphenylamine [class: Diamidine]Description: HTH-type transcriptional regulator QacR, Transcriptional repressor of qacA. Binds to IR1, an unusually long 28 bp operator, which is located downstream from the qacA promoter and overlaps its transcription start site. QacR is induced from its IR1 site by binding to one of many structurally dissimilar cationic lipophilic compounds, which are also substrates of QacA.
Length (amino acid): 188
Reference: Grkovic et al. 1998; Pubmed- 9660841
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Similar resistance genes in 'BacMet Predicted database' |
qacZ | BacMet ID: BAC0329Code for: Efflux
Family: Small multidrug resistance (SMR) familySequence: FASTA
Cross-database IDs: Link
Organism: Enterococcus faecalis (strain ATCC 700802 / V583)Location: Plasmid pTEF1
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)]Description: Multidrug resistance transporter qacZ; qacZ gene in tolerance to the quaternary ammonium compound benzylkonium chloride, but not ethidium bromide or chlorhexidine.
Length (amino acid): 107
Reference: Braga et al. 2011: Pubmed- 21147826
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Similar resistance genes in 'BacMet Predicted database' |
rcnA/yohM | BacMet ID: BAC0330Code for: Efflux
Family: NicO transporter familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Cobalt (Co), Nickel (Ni), Iron (Fe)Description: Efflux system rcnA for nickel and cobalt; Transcriptionally repressed by RcnR. Probably also regulated by Fur. Cadmium, copper and zinc have no effect on the transcription
Length (amino acid): 274
Reference: Rodrigue et al. 2005; Pubmed- 15805538, Koch et al. 2007; Pubmed- 17120142
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Similar resistance genes in 'BacMet Predicted database' |
rcnB/yohN | BacMet ID: BAC0331Code for: Efflux
Family: RcnB familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Nickel (Ni), Cobalt (Co)Description: Nickel/cobalt homeostasis protein RcnB; Act by modulating RcnA-mediated export of these ions to avoid excess efflux. Not involved in nickel import and does not bind nickel or cobalt ions directly. Repressed by RcnR. Induced by nickel and cobalt
Length (amino acid): 112
Reference: Bleriot et al. 2011; Pubmed- 21665978
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Similar resistance genes in 'BacMet Predicted database' |
rcnR/yohL | BacMet ID: BAC0332Code for: Regulator
Family: FrmR/RcnR familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Cobalt (Co), Nickel (Ni), Iron (Fe)Description: Repressor of rcnA, rcnR. Acts by binding specifically to the rcnA promoter in the absence of nickel and cobalt. In the presence of one of these metals, it has a weaker affinity for rcnA promoter. Can repress the rcnB expression as well.
Length (amino acid): 90
Reference: Koch et al. 2007; Pubmed- 17120142
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Similar resistance genes in 'BacMet Predicted database' |
recG | BacMet ID: BAC0356Code for: Enzyme
Family: Contains 1 DEAD/DEAH box helicase domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosa PAO1Location: Chromosome
Compound: Chromium (Cr), Tellurium (Te), Selenium (Se)Description: ATP-dependent DNA helicase RecG. It is involved in repairing DNA damage caused by chromate or its derivatives. Can confer resistant to tellurite, selenite but not arsenite, paraquat or hydrogen peroxide.
Length (amino acid): 691
Reference: Miranda et al. 2005; Pubmed- 16105671, Decorosi et al. 2009; Pubmed- 19768364
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Similar resistance genes in 'BacMet Predicted database' |
recG | BacMet ID: BAC0357Code for: Enzyme
Family: Contains 1 DEAD/DEAH box helicase domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas corrugata 28Location: Chromosome
Compound: Chromium (Cr)Description: fragment of the recG helicase.
Length (amino acid): 156
Reference: Decorosi et al. 2009; Pubmed- 19768364
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Similar resistance genes in 'BacMet Predicted database' |
ricR | BacMet ID: BAC0333Code for: Regulator
Family: Transcriptional repressor metal familySequence: FASTA
Cross-database IDs: Link
Organism: Mycobacterium tuberculosis H37RvLocation: Chromosome
Compound: Copper (Cu)Description: Copper repressor ricR
Length (amino acid): 96
Reference: Festa et al. 2011; Pubmed- 21166899
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Similar resistance genes in 'BacMet Predicted database' |
robA | BacMet ID: BAC0334Code for: Binding protein
Family: 1 HTH araC/xylS-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli O157:H7Location: Chromosome
Compound: Silver (Ag), Mercury (Hg), Cadmium (Cd), Cyclohexane [class: Cycloalkane], Pentane [class: Alkane], n-hexane [class: Alkane], Diphenyl Ether [class: Phenyl]Description: Right origin-binding protein RobA; Organic solvent tolerance by robA is dependent on soxRS; Rob acts as a transcriptional activator. It can confer resistance to antibiotics such as tetracycline, chloramphenicol, phosphomycin, kanamycin, novomycin etc.
Length (amino acid): 289
Reference: Nakajima et al. 1995; Pubmed- 7793951, Jair et al. 1996; Pubmed- 8626315
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Similar resistance genes in 'BacMet Predicted database' |
rpoS | BacMet ID: BAC0335Code for: Regulator
Family: sigma-70 factor familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli, Shigella flexneriLocation: Chromosome
Compound: Hydrochloric acid (HCl) [class: Acid], Sodium hydroxide (NaOH) [class: Base]Description: RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; RpoS is required for optimal maintenance of pH homeostasis of stationary phase cells exposed to extreme acid.
Length (amino acid): 330
Reference: Small et al. 1994; Pubmed- 8132468
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Similar resistance genes in 'BacMet Predicted database' |
ruvB | BacMet ID: BAC0355Code for: Enzyme
Family: RuvB familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosa PAO1Location: Chromosome
Compound: Chromium (Cr), Tellurium (Te), Selenium (Se)Description: ATP-dependent DNA helicase RuvB. It is involved in repairing DNA damage caused by chromate or its derivatives. Can confer resistant to tellurite, selenite but not arsenite, paraquat or hydrogen peroxide.
Length (amino acid): 352
Reference: Miranda et al. 2005; Pubmed- 16105671, Decorosi et al. 2009; Pubmed- 19768364
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Similar resistance genes in 'BacMet Predicted database' |
ruvB | BacMet ID: BAC0293Code for: Enzyme
Family: Malic enzymes familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas corrugata 28Location: Chromosome
Compound: Chromium (Cr), Cetylpyridinium Chloride (CPC) [class: Quaternary Ammonium Compounds (QACs)], Dodine [class: Acetate], 2-nitroimidazole [class: imidazole]Description: It is a fragment of ruvB gene product. It is a oxidoreductase from malic enzyme family.
Length (amino acid): 379
Reference: Decorosi et al. 2009; Pubmed- 19768364
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Similar resistance genes in 'BacMet Predicted database' |
sdeA | BacMet ID: BAC0336Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Legionella longbeachae D-4968Location: Chromosome
Compound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Ethidium Bromide [class: Phenanthridine], n-hexane [class: Alkane], Chlorhexidine [class: Biguanides], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)]Description: Multidrug resistance secretion protein SdeA; part of the sdeAB-tolC efflux system
Length (amino acid): 336
Reference: Maseda et al. 2009; Pubmed- 19752278, Kumar et al. 2002; Pubmed- 12356807, Kumar et al. 2005; Pubmed- 15793131, Begic et al. 2008; Pubmed- 18227249
|
Similar resistance genes in 'BacMet Predicted database' |
sdeB | BacMet ID: BAC0337Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Serratia marcescens subsp. marcescensLocation: Chromosome
Compound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Ethidium Bromide [class: Phenanthridine], n-hexane [class: Alkane], Chlorhexidine [class: Biguanides], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)]Description: Multidrug efflux protein SdeB; part of the sdeAB-tolC efflux system
Length (amino acid): 1047
Reference: Maseda et al. 2009; Pubmed- 19752278, Kumar et al. 2005; Pubmed- 15793131, Begic et al. 2008; Pubmed- 18227249
|
Similar resistance genes in 'BacMet Predicted database' |
sdeX | BacMet ID: BAC0338Code for: Efflux
Family: RND superfmailySequence: FASTA
Cross-database IDs: Link
Organism: Only gram -ve, Serratia marcescensLocation: Chromosome
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Triclosan [class: Phenolic compounds], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Acriflavine [class: Acridine], Rhodamine 6G [class: Xanthene]Description: Multidrug efflux pump SdeX
Length (amino acid): 393
Reference: Chen et al. 2003 ; Pubmed- 12837741
|
Similar resistance genes in 'BacMet Predicted database' |
sdeY | BacMet ID: BAC0339Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Only gram -ve, Serratia marcescensLocation: Chromosome
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Triclosan [class: Phenolic compounds], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Acriflavine [class: Acridine], Rhodamine 6G [class: Xanthene]Description: Multidrug efflux pump SdeY
Length (amino acid): 1051
Reference: Chen et al. 2003 ; Pubmed- 12837741
|
Similar resistance genes in 'BacMet Predicted database' |
sepA | BacMet ID: BAC0340Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Staphylococcus aureusLocation: Chromosome
Compound: Acriflavine [class: Acridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Ethidium Bromide [class: Phenanthridine]Description: Multidrug resistance efflux pump sepA; Involved in multidrug efflux. Confers low level resistance to drugs such as Acriflavine, benzylkonium chloride (BAC), chlorhexidine gluconate and ethidium bromide
Length (amino acid): 382
Reference: Narui et al. 2002; Pubmed- 12499635
|
Similar resistance genes in 'BacMet Predicted database' |
silA | BacMet ID: BAC0341Code for: Efflux
Family: AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Salmonella typhimuriumLocation: Plasmid pMG101 (Salmonella typhimurium)
Compound: Silver (Ag)Description: SilA is a inner membrane chemiosmotic, cation/proton antiporter; Component of the sil cation-efflux system (silABC) that confers resistance to silver
Length (amino acid): 1048
Reference: Gupta et al. 1999; Pubmed- 9930866
|
Similar resistance genes in 'BacMet Predicted database' |
silB | BacMet ID: BAC0342Code for: Efflux
Family: Membrane fusion protein (MFP) familySequence: FASTA
Cross-database IDs: Link
Organism: Salmonella typhimuriumLocation: Plasmid pMG101 (Salmonella typhimurium)
Compound: Silver (Ag)Description: SilB, a membrane fusion protein that brings together the inner and outer membranes of Gram-negative bacteria; Component of the sil cation-efflux system (silABC) that confers resistance to silver
Length (amino acid): 430
Reference: Gupta et al. 1999; Pubmed- 9930866
|
Similar resistance genes in 'BacMet Predicted database' |
silC | BacMet ID: BAC0343Code for: Efflux
Family: Outer Membrane Protein (OMP) familySequence: FASTA
Cross-database IDs: Link
Organism: Salmonella typhimuriumLocation: Plasmid pMG101 (Salmonella typhimurium)
Compound: Silver (Ag)Description: SilC is an outer membrane lipoprotein; Component of the sil cation-efflux system (silABC) that confers resistance to silver
Length (amino acid): 461
Reference: Gupta et al. 1999; Pubmed- 9930866
|
Similar resistance genes in 'BacMet Predicted database' |
silE | BacMet ID: BAC0344Code for: Binding protein
Family: unknownSequence: FASTA
Cross-database IDs: Link
Organism: Salmonella typhimuriumLocation: Plasmid pMG101 (Salmonella typhimurium)
Compound: Silver (Ag)Description: Component of the sil cation-efflux system that confers resistance to silver; it also can participate in resistance to Ag+ individually
Length (amino acid): 143
Reference: Gupta et al. 1999; Pubmed- 9930866
|
Similar resistance genes in 'BacMet Predicted database' |
silF | BacMet ID: BAC0345Code for: Chaperone
Family: Contains a CusF domainSequence: FASTA
Cross-database IDs: Link
Organism: Salmonella typhimuriumLocation: Plasmid pMG101 (Salmonella typhimurium)
Compound: Silver (Ag)Description: Silver efflux system periplasmic chaperone; It is a small gene resides in between SilC and SilB of SilCFBA(ORF105)P operon; It carries Ag+ from its periplasmic site of release by SilP to the periplasmic uptake site of SilA, as part of the SilCBA complex
Length (amino acid): 96
Reference: Gupta et al. 1999; Pubmed- 9930866, Silver et al. 2006; Pubmed- 16761169
|
Similar resistance genes in 'BacMet Predicted database' |
silP | BacMet ID: BAC0346Code for: Enzyme
Family: Cation transport ATPase (P-type) family (Type IB subfamily)Sequence: FASTA
Cross-database IDs: Link
Organism: Salmonella typhimuriumLocation: Plasmid pMG101 (Salmonella typhimurium), Plasmid pLVPK (Klebsiella pneumoniae)
Compound: Silver (Ag)Description: Silver exporting P-type ATPase silP; Component of the sil cation-efflux system that confers resistance to silver; silP can participate in resistance to Ag+ individually; located in cell membrane.
Length (amino acid): 824
Reference: Gupta et al. 1999; Pubmed- 9930866
|
Similar resistance genes in 'BacMet Predicted database' |
silR | BacMet ID: BAC0347Code for: Regulator
Family: Contains 1 response regulatory domain.Sequence: FASTA
Cross-database IDs: Link
Organism: Salmonella typhimuriumLocation: Plasmid pMG101 (Salmonella typhimurium)
Compound: Silver (Ag)Description: silR encodes an transcriptional regulator; Component of the sil cation-efflux system that confers resistance to silver. Probable member of a two-component regulatory system SilS/SilR.
Length (amino acid): 228
Reference: Gupta et al. 1999; Pubmed- 9930866
|
Similar resistance genes in 'BacMet Predicted database' |
silS | BacMet ID: BAC0348Code for: Regulator
Family: Contains 1 HAMP domain and 1 histidine kinase domain.Sequence: FASTA
Cross-database IDs: Link
Organism: Salmonella typhimuriumLocation: Plasmid pMG101 (Salmonella typhimurium)
Compound: Silver (Ag)Description: silS encodes a membrane sensor kinase; Component of the sil cation-efflux system that confers resistance to silver. Probable member of a two-component regulatory system SilS/SilR. May activate SilR by phosphorylation
Length (amino acid): 497
Reference: Gupta et al. 1999; Pubmed- 9930866
|
Similar resistance genes in 'BacMet Predicted database' |
sitA | BacMet ID: BAC0349Code for: Binding protein
Family: ABC superfamily ( bacterial solute-binding protein 9 family)Sequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli O45:K1 (strain S88 / ExPEC)Location: Plasmid pECOS88 (Escherichia coli O45:K1 (strain S88 / ExPEC)), Plasmid pCVM29188_146 (Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188)
Compound: Manganese (Mn), Iron (Fe), Hydrogen Peroxide (H2O2) [class: Peroxides]Description: Iron/Mn transport protein, periplasmic-binding protein SitA; sitA gene encodes a periplasmic binding protein
Length (amino acid): 305
Reference: Kehres et al. 2002; Pubmed- 12029031, Sabri et al. 2006; Pubmed- 16514154
|
Similar resistance genes in 'BacMet Predicted database' |
sitB | BacMet ID: BAC0350Code for: Binding protein
Family: ABC superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain SMS-3-5 / SECEC)Location: Plasmid pSMS35_130 (Escherichia coli (strain SMS-3-5 / SECEC)), Plasmid pCS0010A (Salmonella enterica subsp. enterica serovar Kentucky)
Compound: Manganese (Mn), Iron (Fe), Hydrogen Peroxide (H2O2) [class: Peroxides]Description: sitB encodes an ATP-binding protein
Length (amino acid): 273
Reference: Kehres et al. 2002; Pubmed- 12029031, Sabri et al. 2006; Pubmed- 16514154
|
Similar resistance genes in 'BacMet Predicted database' |
sitC | BacMet ID: BAC0351Code for: Enzyme
Family: ABC superfamily ( ABC-3 integral membrane protein family)Sequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain SMS-3-5 / SECEC)Location: Plasmid pSMS35_130 (Escherichia coli (strain SMS-3-5 / SECEC)), Plasmid pPag3 (Pantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1)))
Compound: Manganese (Mn), Iron (Fe), Hydrogen Peroxide (H2O2) [class: Peroxides]Description: sitC encodes a permease (integral membrane protein); part of the sitABCD transport system
Length (amino acid): 286
Reference: Kehres et al. 2002; Pubmed- 12029031, Sabri et al. 2006; Pubmed- 16514154
|
Similar resistance genes in 'BacMet Predicted database' |
sitD | BacMet ID: BAC0352Code for: Enzyme
Family: ABC superfamily ( ABC-3 integral membrane protein family)Sequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain SMS-3-5 / SECECLocation: Plasmid pSMS35_130 (Escherichia coli (strain SMS-3-5 / SECEC)), Plasmid pPag3 (Pantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1)))
Compound: Manganese (Mn), Iron (Fe), Hydrogen Peroxide (H2O2) [class: Peroxides]Description: sitD encode a permease (integral membrane protein); part of the sitABCD transport system
Length (amino acid): 282
Reference: Kehres et al. 2002; Pubmed- 12029031, Sabri et al. 2006; Pubmed- 16514154
|
Similar resistance genes in 'BacMet Predicted database' |
smdA | BacMet ID: BAC0353Code for: Efflux
Family: ABC superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Serratia marcescensLocation: Chromosome
Compound: 4,6-diamidino-2-phenylindole (DAPI) [class: Diamidine], Hoechst 33342 [class: Bisbenzimide]Description: Multidrug efflux pump SmdA
Length (amino acid): 591
Reference: Matsuo et al. 2008; Pubmed- 18024518
|
Similar resistance genes in 'BacMet Predicted database' |
smdB | BacMet ID: BAC0354Code for: Efflux
Family: ABC superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Serratia marcescensLocation: Chromosome
Compound: 4,6-diamidino-2-phenylindole (DAPI) [class: Diamidine], Hoechst 33342 [class: Bisbenzimide]Description: Multidrug efflux pump SmdB
Length (amino acid): 592
Reference: Matsuo et al. 2008; Pubmed- 18024518
|
Similar resistance genes in 'BacMet Predicted database' |
smeD | BacMet ID: BAC0358Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Stenotrophomonas maltophiliaLocation: Chromosome
Compound: Triclosan [class: Phenolic compounds], Acriflavine [class: Acridine], Rhodamine 6G [class: Xanthene], Crystal Violet [class: Triarylmethane], Ethidium Bromide [class: Phenanthridine], Proflavin [class: Acridine], SDSDescription: Membrane fusion protein of RND family multidrug efflux pump smeD; part of the smeDEF efflus system. It confers resisance to a wide range of antibiotics.
Length (amino acid): 394
Reference: Sanchez et al. 2005; Pubmed- 15673767, Alonso et al. 2000; Pubmed- 11036026, Zhang et al. 2001, Pubmed- 11709330
|
Similar resistance genes in 'BacMet Predicted database' |
smeE | BacMet ID: BAC0359Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Stenotrophomonas maltophiliaLocation: Chromosome
Compound: Triclosan [class: Phenolic compounds], Acriflavine [class: Acridine], Rhodamine 6G [class: Xanthene], Crystal Violet [class: Triarylmethane], Ethidium Bromide [class: Phenanthridine], Proflavin [class: Acridine], SDSDescription: RND efflux system, inner membrane transporter smeE; part of the smeDEF efflus system. It confers resisance to a wide range of antibiotics.
Length (amino acid): 1040
Reference: Sanchez et al. 2005; Pubmed- 15673767, Alonso et al. 2000; Pubmed- 11036026, Zhang et al. 2001, Pubmed- 11709330
|
Similar resistance genes in 'BacMet Predicted database' |
smeF | BacMet ID: BAC0360Code for: Efflux
Family: RND Superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Stenotrophomonas maltophiliaLocation: Chromosome
Compound: Triclosan [class: Phenolic compounds], Acriflavine [class: Acridine], Rhodamine 6G [class: Xanthene], Crystal Violet [class: Triarylmethane], Ethidium Bromide [class: Phenanthridine], Proflavin [class: Acridine], SDSDescription: Multidrug resistance outer membrane protein smeF; part of the smeDEF efflus system. It confers resisance to a wide range of antibiotics.
Length (amino acid): 466
Reference: Sanchez et al. 2005; Pubmed- 15673767, Alonso et al. 2000; Pubmed- 11036026, Zhang et al. 2001, Pubmed- 11709330
|
Similar resistance genes in 'BacMet Predicted database' |
smeT | BacMet ID: BAC0362Code for: Regulator
Family: Contains 1 HTH tetR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Stenotrophomonas maltophiliaLocation: Chromosome
Compound: Triclosan [class: Phenolic compounds]Description: SmeT repressor protein for the the multidrug efflux system smeDEF
Length (amino acid): 219
Reference: Sanchez et al. 2002; Pubmed- 12384340, Hernandez et al. 2011; Pubmed- 21738470
|
Similar resistance genes in 'BacMet Predicted database' |
smfY | BacMet ID: BAC0363Code for: Efflux
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Serratia marcescensLocation: Chromosome
Compound: Acriflavine [class: Acridine], 4,6-diamidino-2-phenylindole (DAPI) [class: Diamidine], Ethidium Bromide [class: Phenanthridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Methyl Viologen [class: Paraquat], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)]Description: Multidrug efflux pump SmfY
Length (amino acid): 490
Reference: Shahcheraghi et al. 2007; Pubmed- 17409524
|
Similar resistance genes in 'BacMet Predicted database' |
smrA | BacMet ID: BAC0364Code for: Efflux
Family: ABC superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Stenotrophomonas maltophiliaLocation: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Rhodamine 6G [class: Xanthene], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], 4,6-diamidino-2-phenylindole (DAPI) [class: Diamidine]Description: ABC-type multidrug efflux pump protein SmrA
Length (amino acid): 610
Reference: Al-Hamad et al. 2009; Pubmed- 19643774
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Similar resistance genes in 'BacMet Predicted database' |
smtA | BacMet ID: BAC0365Code for: Binding protein
Family: Metallothionein superfamily. Type 14 familySequence: FASTA
Cross-database IDs: Link
Organism: Cyanobacteria (e.g. Synechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2)); Escherichia coli (strain K12)Location: Chromosome
Compound: Zinc (Zn), Mercury (Hg)Description: Metallothionein SmtA; Contain 9 cysteine residues; plays a role in essential metal ion homeostasis (especially zinc homeostasis) and resistance to certain non-essential metal ions. Metallothioneins have a high content of cysteine residues that bind various heavy metals. Cells that lack of metallothionein have reduced uptake of Zn++ and reduced tolerance to high Zn++ concentrations (althogh the Cu++ and Hg++ tolerances are unchanged); often Cd++ resistant when cells grow in high level of Cd++.
Length (amino acid): 56
Reference: Shi et al. 1992, Pubmed- 1607014
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Similar resistance genes in 'BacMet Predicted database' |
smtB/ziaR | BacMet ID: BAC0366Code for: Regulator
Family: Contains 1 HTH arsR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Cyanobacteria (e.g. Synechococcus elongatus (strain PCC 7942) (Anacystis nidulans R2))Location: Chromosome
Compound: Zinc (Zn)Description: Repressor protein smtB; regulates the metallothionein synthesis in transcrition level negatively; its a helix-turn-helix protein in the same family of arsR and cadC; binds at imperfect inverted repeat TGAAACA-GT-TATTCA between the transcription initiation site and the ribosome binding site for smtA; Transcriptional repressor of the Expression of the smtA gene. Binds two zinc ions per dimer. The complex of DNA and smtB is dissociated by zinc ions.
Length (amino acid): 122
Reference: Huckle et al. 1993; Pubmed- 8446025
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Similar resistance genes in 'BacMet Predicted database' |
smvA/emrB | BacMet ID: BAC0367Code for: Efflux
Family: Major facilitator superfamily (MFS), TCR/tet familySequence: FASTA
Cross-database IDs: Link
Organism: Salmonella typhimuriumLocation: Chromosome
Compound: Methyl Viologen [class: Paraquat], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Hoechst 33342 [class: Bisbenzimide], Ethidium Bromide [class: Phenanthridine], Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Acriflavine [class: Acridine]Description: Methyl viologen resistance protein SmvA, Major efflux pump for Acriflavine and other quaternary ammonium compounds (QACs). Also required for resistance to methyl viologen, Mutants show increased sensitivity to methyl viologen and Acriflavine.
Length (amino acid): 495
Reference: Santiviago et al. 2002; Pubmed- 12410826, Hongo et al. 1994; Pubmed- 7926834, Ogawa et al. 2006; Pubmed- 16508165
|
Similar resistance genes in 'BacMet Predicted database' |
sodA | BacMet ID: BAC0368Code for: Enzyme
Family: Iron/manganese superoxide dismutase familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli K12Location: Chromosome
Compound: Selenium (Se), Hydrogen Peroxide (H2O2) [class: Peroxides]Description: Mn-dependent superoxide dismutase; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
Length (amino acid): 206
Reference: Bebien et al. 2002; Pubmed- 11872706
|
Similar resistance genes in 'BacMet Predicted database' |
sodA | BacMet ID: BAC0705Code for: Enzyme
Family: Iron/manganese superoxide dismutase familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosaLocation: Chromosome
Compound: Hydrogen Peroxide (H2O2) [class: Peroxides]Description: Mn-dependent superoxide dismutase; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
Length (amino acid): 203
Reference: Hassett et al. 1993; Pubmed- 8244935
|
Similar resistance genes in 'BacMet Predicted database' |
sodB | BacMet ID: BAC0706Code for: Enzyme
Family: Iron/manganese superoxide dismutase familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas aeruginosaLocation: Chromosome
Compound: Hydrogen Peroxide (H2O2) [class: Peroxides]Description: Fe-dependent superoxide dismutase; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
Length (amino acid): 193
Reference: Hassett et al. 1993; Pubmed- 8244935
|
Similar resistance genes in 'BacMet Predicted database' |
sodB | BacMet ID: BAC0707Code for: Enzyme
Family: Iron/manganese superoxide dismutase familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli K12Location: Chromosome
Compound: Selenium (Se), Hydrogen Peroxide (H2O2) [class: Peroxides]Description: Fe-dependent superoxide dismutase. Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems.
Length (amino acid): 193
Reference: Bebien et al. 2002; Pubmed- 11872706
|
Similar resistance genes in 'BacMet Predicted database' |
soxR | BacMet ID: BAC0370Code for: Regulator
Family: Contains 1 HTH merR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Methyl Viologen [class: Paraquat]Description: Redox-sensitive transcriptional activator SoxR; Activates the transcription of the soxS gene which itself controls the superoxide response regulon. SoxR contains a 2Fe-2S iron-sulfur cluster that may act as a redox sensor system that recognizes superoxide. The variable redox state of the Fe-S cluster is employed in vivo to modulate the transcriptional activity of SoxR in response to specific types of oxidative stress. Upon reduction of 2Fe-2S cluster, SoxR reversibly loses its transcriptional activity, but retains its DNA binding affinity.
Length (amino acid): 154
Reference: Nakajima et al. 1995; Pubmed- 7670195, Wu et al. 1991; Pubmed- 1708380
|
Similar resistance genes in 'BacMet Predicted database' |
soxS | BacMet ID: BAC0371Code for: Regulator
Family: Contains 1 HTH araC/xylS-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Zinc (Zn), Cyclohexane [class: Cycloalkane]Description: Regulatory protein SoxS; Increases the Zn uptake system znuACB; Transcriptional activator of the superoxide response regulon of E.coli that includes at least 10 genes such as sodA, nfo, zwf and micF. Binds the DNA sequence 5'-GCACN7CAA-3'. It also facilitates the subsequent binding of RNA polymerase to the micF and the nfo promoters.
Length (amino acid): 107
Reference: Nakajima et al. 1995; Pubmed- 7670195, Warner et al. 2012; Pubmed- 22210763
|
Similar resistance genes in 'BacMet Predicted database' |
srpA | BacMet ID: BAC0372Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putida (Arthrobacter siderocapsulatus)Location: Chromosome
Compound: n-hexane [class: Alkane], Toluene [class: Aromatic hydrocarbons], Dimethylphthalate [class: Pthalate]Description: Solvent-resistant efflux pump periplasmic linker SrpA; a component of an organic solvent efflux pump srpABC. Involved in export of a number of low log POW compounds including hexane (log POW 3.5), toluene (log POW 2.5) and dimethylphthalate (log POW 2.3). The solvent resistance phenotype has been postulated to depend on the operon Expression level.
Length (amino acid): 382
Reference: Kieboom et al. 1998; Pubmed- 9417051, Kieboom eta l. 1998; Pubmed- 9852029, Kim et al. 1998; Pubmed- 9658016
|
Similar resistance genes in 'BacMet Predicted database' |
srpB | BacMet ID: BAC0373Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putida (Arthrobacter siderocapsulatus)Location: Chromosome
Compound: n-hexane [class: Alkane], Toluene [class: Aromatic hydrocarbons], Dimethylphthalate [class: Pthalate]Description: Solvent-resistant pump membrane transporter SrpB; The inner membrane transporter component of an organic solvent efflux pump srpABC. Involved in export of a number of low log POW compounds including hexane (log POW 3.5), toluene (log POW 2.5) and dimethylphthalate (log POW 2.3). The solvent resistance phenotype has been postulated to depend on the operon expression level.
Length (amino acid): 1049
Reference: Kieboom et al. 1998; Pubmed- 9417051, Kieboom eta l. 1998; Pubmed- 9852029, Kim et al. 1998; Pubmed- 9658016
|
Similar resistance genes in 'BacMet Predicted database' |
srpC | BacMet ID: BAC0374Code for: Efflux
Family: RND Superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putidaLocation: Chromosome
Compound: n-hexane [class: Alkane], Toluene [class: Aromatic hydrocarbons], Dimethylphthalate [class: Pthalate]Description: Solvent-resistant efflux pump outer membrane protein SrpC; The outer membrane component of an organic solvent efflux pump srpABC. Involved in export of a number of low log POW compounds including hexane (log POW 3.5), toluene (log POW 2.5) and dimethylphthalate (log POW 2.3). The solvent resistance phenotype has been postulated to depend on the operon expression level.
Length (amino acid): 470
Reference: Kieboom et al. 1998; Pubmed- 9417051, Kieboom eta l. 1998; Pubmed- 9852029, Kim et al. 1998; Pubmed- 9658016
|
Similar resistance genes in 'BacMet Predicted database' |
srpC | BacMet ID: BAC0152Code for: Efflux
Family: Chromate Ion Transporter (CHR) familySequence: FASTA
Cross-database IDs: Link
Organism: Synechococcus elongatus strain PCC 7942 (Anacystis nidulans R2)Location: Plasmid pANL
Compound: Chromium (Cr)Description: A homologue of chrA. SrpC is not a sulfate transporter. Functions as a transporter that extrudes chromate ions from cytoplasm under sulfur-deficient conditions.
Length (amino acid): 393
Reference: Aguilar-Barajas et al. 2012; Pubmed- 22805806
|
Similar resistance genes in 'BacMet Predicted database' |
srpR | BacMet ID: BAC0375Code for: Regulator
Family: Contains 1 HTH tetR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putidaLocation: Chromosome
Compound: n-hexane [class: Alkane], Toluene [class: Aromatic hydrocarbons], Dimethylphthalate [class: Pthalate]Description: Solvent efflux pump srpABC operon corepressor SrpR; In conjunction with SrpS represses the srpABC operon.
Length (amino acid): 213
Reference: Sun et al. 2011; Pubmed- 21441510
|
Similar resistance genes in 'BacMet Predicted database' |
srpS | BacMet ID: BAC0376Code for: Regulator
Family: Contains 1 HTH iclR-type DNA-binding domain, 1 iclR-ED (iclR effector binding) domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putidaLocation: Chromosome
Compound: n-hexane [class: Alkane], Toluene [class: Aromatic hydrocarbons], Dimethylphthalate [class: Pthalate]Description: Solvent efflux pump srpABC operon corepressor SrpS; In conjunction with SrpR represses the srpABC operon.
Length (amino acid): 259
Reference: Sun et al. 2011; Pubmed- 21441510
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Similar resistance genes in 'BacMet Predicted database' |
ssmE | BacMet ID: BAC0377Code for: Efflux
Family: Small multidrug resistance (SMR) familySequence: FASTA
Cross-database IDs: Link
Organism: Serratia marcescensLocation: Chromosome
Compound: Acriflavine [class: Acridine], Ethidium Bromide [class: Phenanthridine], Methyl Viologen [class: Paraquat], Chlorhexidine [class: Biguanides]Description: Multidrug efflux pump SsmE
Length (amino acid): 110
Reference: Minato et al. 2008; Pubmed- 18310921
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Similar resistance genes in 'BacMet Predicted database' |
sugE | BacMet ID: BAC0378Code for: Efflux
Family: Small multidrug resistance (SMR) family (SugE subfamily)Sequence: FASTA
Cross-database IDs: Link
Organism: only gram -ve, Escherichia coliLocation: Plasmid IncN p541 (Escherichia coli), Plasmid pIW759 (Salmonella typhimurium)
Compound: Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Cetylpyridinium Chloride (CPC) [class: Quaternary Ammonium Compounds (QACs)], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], and Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate]Description: Quaternary ammonium compound-resistance protein sugE, Quaternary ammonium compound efflux pump. Confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations; Unlike the other members of the SMR family, SugE exhibits a narrow specificity for a very specific class of compounds.
Length (amino acid): 105
Reference: Chung et al. 2002; Pubmed- 11948170, He et al. 2011; Pubmed- 21576447
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Similar resistance genes in 'BacMet Predicted database' |
tbtA | BacMet ID: BAC0379Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas stutzeri (Pseudomonas perfectomarina)Location: Chromosome
Compound: Tributyltin (TBT) [class: Organo-tin], n-hexane [class: Alkane]Description: Tributyltin chloride resistance membrane fusion protein TbtA; has 4 characteristic motifs A, B, C and D; part of the tbtABM efflux system
Length (amino acid): 382
Reference: Fukagawa et al. 1993; Pubmed- 8343157, Jude et al. 2004; Pubmed- 15019728
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Similar resistance genes in 'BacMet Predicted database' |
tbtB | BacMet ID: BAC0380Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas stutzeri (Pseudomonas perfectomarina)Location: Chromosome
Compound: Tributyltin (TBT) [class: Organo-tin], n-hexane [class: Alkane]Description: Resistance nodulation cell division family member TbtB; Aanalogous to proton dependent efflux pump belonging to RND family; part of the tbtABM efflux system
Length (amino acid): 1046
Reference: Fukagawa et al. 1993; Pubmed- 8343157, Jude et al. 2004; Pubmed- 15019728
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Similar resistance genes in 'BacMet Predicted database' |
tbtM | BacMet ID: BAC0381Code for: Efflux
Family: RND Superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas stutzeriLocation: Chromosome
Compound: Tributyltin (TBT) [class: Organo-tin], n-hexane [class: Alkane]Description: Outer membrane protein TbtM, part of the tbtABM efflux system
Length (amino acid): 476
Reference: Fukagawa et al. 1993; Pubmed- 8343157, Jude et al. 2004; Pubmed- 15019728
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Similar resistance genes in 'BacMet Predicted database' |
tbtR | BacMet ID: BAC0382Code for: Regulator
Family: Contains 1 HTH iclR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas stutzeri Location: Chromosome
Compound: Tributyltin (TBT) [class: Organo-tin], n-hexane [class: Alkane]Description: Efflux pump regulator; a potential regulatory gene of tbtABM, named tbtR, is identified upstream of the operon; TbtR exhibited many similarities with other repressors of the RND efflux systems
Length (amino acid): 259
Reference: Fukagawa et al. 1993; Pubmed- 8343157, Jude et al. 2004; Pubmed- 15019728
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Similar resistance genes in 'BacMet Predicted database' |
tcrB | BacMet ID: BAC0383Code for: Enzyme
Family: Cation transport ATPase (P-type) familySequence: FASTA
Cross-database IDs: Link
Organism: Enterococcus faecium (Streptococcus faecium)Location: Plasmid pA17sv1 (Enterococcus faecium),
Compound: Copper (Cu)Description: The transferable, plasmid-localized Copper resistance efflux ATPase, TcrB
Length (amino acid): 710
Reference: Hasman te al. 2002; Pubmed- 11959576, Hasman et al. 2005; Pubmed- 16151212
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Similar resistance genes in 'BacMet Predicted database' |
tehA | BacMet ID: BAC0384Code for: Membrane Transporter
Family: Tellurite-resistance/dicarboxylate transporter (TDT) familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Tellurium (Te), Proflavin [class: Acridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine], Crystal Violet [class: Triarylmethane], Dequalinium [class: Quaternary Ammonium Compounds (QACs)], Methyl Viologen [class: Paraquat]Description: Tellurite resistance protein TehA; The gene encodes an integral membrane protein. Responsible for potassium tellurite resistance when present in high copy number. Ion channel involved in potassium tellurite resistance, otherwise phenotypically silent
Length (amino acid): 330
Reference: Walter et al 1991; Pubmed- 2060788, Taylor et al. 1994; Pubmed- 8169225, Turner et al. 1997; Pubmed- 9021204
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Similar resistance genes in 'BacMet Predicted database' |
tehB | BacMet ID: BAC0385Code for: Enzyme
Family: TehB familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Tellurium (Te), Proflavin [class: Acridine]Description: S-adenosyl-L-methionine dependent methyltransferase tehB that catalyzes the methylation of tellurite and is responsible for tellurite resistance when present in high copy number. Can also methylate selenite and selenium dioxide. Is thus able to detoxify different chalcogens. Can not methylate arsenic compounds
Length (amino acid): 197
Reference: Walter et al 1991; Pubmed- 2060788, Taylor et al. 1994; Pubmed- 8169225
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Similar resistance genes in 'BacMet Predicted database' |
terA | BacMet ID: BAC0386Code for: Unknown
Family: TerA famiySequence: FASTA
Cross-database IDs: Link
Organism: Alcaligenes sp.Location: Plasmid IncHI2 pMER610 (Alcaligenes sp.), Plasmid pK2044 (Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044)
Compound: Tellurium (Te)Description: Tellurium resistance protein TerA; Response to tellurium ion
Length (amino acid): 339
Reference: Jobling et al. 1988; Pubmed- 3049247, Hill et al. 1993; Pubmed- 8232205
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Similar resistance genes in 'BacMet Predicted database' |
terB | BacMet ID: BAC0387Code for: unknown
Family: TerB familySequence: FASTA
Cross-database IDs: Link
Organism: Alcaligenes sp.Location: Plasmid IncHI2 pMER610 (Alcaligenes sp.), Plasmid pPag2 (Pantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1)))
Compound: Tellurium (Te)Description: Tellurium resistance protein TerB; terBCDE genes are essential for the resistance
Length (amino acid): 122
Reference: Kormutakova et al. 2000; Pubmed- 11016400
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Similar resistance genes in 'BacMet Predicted database' |
terC | BacMet ID: BAC0388Code for: Membrane Transporter
Family: TerC familySequence: FASTA
Cross-database IDs: Link
Organism: Alcaligenes sp.Location: Plasmid IncHI2 pMER610 (Alcaligenes sp.), Plasmid pK2044 (Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 )
Compound: Tellurium (Te)Description: Tellurium resistance protein TerC; Could conceivably alter the intracellular level of tellurium in a manner leading to resistance. Alternatively its presence in the membrane may provide a barrier to entry of the tellurium ions.
Length (amino acid): 346
Reference: Whelan et al. 1995; Pubmed- 7665479, Kormutakova et al. 2000; Pubmed- 11016400
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Similar resistance genes in 'BacMet Predicted database' |
terD | BacMet ID: BAC0389Code for: Unknown
Family: CAPAB/TerDEXZ familySequence: FASTA
Cross-database IDs: Link
Organism: Alcaligenes sp.Location: Plasmid IncHI2 pMER610 (Alcaligenes sp.), Plasmid IncHI2 R478 (Serratia marcescens), Plasmid pK29 (Klebsiella pneumoniae)
Compound: Tellurium (Te)Description: Tellurium resistance protein TerD; Contribute to the tellurium resistance (Ter) mechanism.
Length (amino acid): 192
Reference: Whelan et al. 1995; Pubmed- 7665479, Kormutakova et al. 2000; Pubmed- 11016400
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Similar resistance genes in 'BacMet Predicted database' |
terE | BacMet ID: BAC0390Code for: Unknown
Family: CAPAB/TerDEXZ familySequence: FASTA
Cross-database IDs: Link
Organism: Alcaligenes sp.Location: Plasmid IncHI2 pMER610 (Alcaligenes sp.), Plasmid IncHI2 R478 (Serratia marcescens)
Compound: Tellurium (Te)Description: Tellurium resistance protein TerE; Contribute to the tellurium resistance (Ter) mechanism
Length (amino acid): 191
Reference: Kormutakova et al. 2000; Pubmed- 11016400
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Similar resistance genes in 'BacMet Predicted database' |
terW | BacMet ID: BAC0391Code for: Regulator
Family: Tellurite/Phi/PacB toxicity protection, TerW familySequence: FASTA
Cross-database IDs: Link
Organism: Serratia marcescens subsp. MarcescensLocation: Plasmid IncHI2 R478 (Serratia marcescens), Plasmid pK29 (Klebsiella pneumoniae), Plasmid pEC-IMP (Enterobacter cloacae)
Compound: Tellurium (Te)Description: Tellurium resistance protein TerW; ter operon (terZABCDE) is naturally controlled by the terW gene product
Length (amino acid): 155
Reference: Vavrova et al. 2006; Pubmed- 16937251, Valkovicova et al. 2011; DOI: 10.2478/s11756-011-0075-5
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Similar resistance genes in 'BacMet Predicted database' |
terZ | BacMet ID: BAC0392Code for: Unknown
Family: CAPAB/TerDEXZ familySequence: FASTA
Cross-database IDs: Link
Organism: Serratia marcescens subsp. MarcescensLocation: Plasmid IncHI2 R478 (Serratia marcescens), Plasmid pK29 (Klebsiella pneumoniae)
Compound: Tellurium (Te)Description: Tellurium resistance protein TerZ; Contribute to the tellurium resistance (Ter) mechanism. Also involved in phage inhibition (Phi) and colicin resistance (PacB).
Length (amino acid): 193
Reference: Whelan et al. 1995; Pubmed- 7665479
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Similar resistance genes in 'BacMet Predicted database' |
tolC | BacMet ID: BAC0393Code for: Efflux
Family: RND Superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Phenol [class: Phenolic compounds], Triclosan [class: Phenolic compounds], Sodium Deoxycholate (SDC) [class: Acid], Sodium Cholate [class: Acid], Sodium Taurodeoxycholate [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Proflavin [class: Acridine], Acriflavine [class: Acridine], Ethidium Bromide [class: Phenanthridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Rhodamine 6G [class: Xanthene], Tetraphenylarsonium (TPA) [class: Quaternary Ammonium Compounds (QACs)], Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Dequalinium [class: Quaternary Ammonium Compounds (QACs)], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Plumbagin [class: Naphthoquinone]Description: Required for proper expression of outer membrane protein genes such as ompF, nmpC, protein 2, hemolysin, colicin V, or colicin E1. May be specialized for signal sequence independent, extracellular secretion in Gram-negative bacteria. Required for acrAB, mar efflux pumps to act as multidrug efflux pump.
Length (amino acid): 493
Reference: Hackett et al. 1983; Pubmed- 6312426, Fralick et al. 1996; Pubmed- 8824631, Sulavik et al. 2001; Pubmed- 11257026
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Similar resistance genes in 'BacMet Predicted database' |
tolCsm | BacMet ID: BAC0507Code for: Efflux
Family: RND superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Stenotrophomonas maltophilia (strain K279a)Location: Chromosome
Compound: Acriflavine [class: Acridine], Carbonyl cyanide 3-chlorophenylhydrazone (CCCP) [class: Hydrazone], Crystal Violet [class: Triarylmethane], Methyl Viologen [class: Paraquat], Plumbagin [class: Naphthoquinone], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Tetrachlorosalicylanilide (TCS) [class: Salicylanilide], Menadione [class: Naphthoquinone]Description: Outer membrane protein. pcm and tolCsm genes form an operon. A significant feature of TolCsm different from that of other tolC homologues of Enterobacteriaceae is that tolCsm is not transcribed alone, but is transcribed with the pcm gene.
Length (amino acid): 452
Reference: Huang et al. 2013; Pubmed- 23629016
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Similar resistance genes in 'BacMet Predicted database' |
trgA | BacMet ID: BAC0394Code for: Membrane Transporter
Family: UnknownSequence: FASTA
Cross-database IDs: Link
Organism: Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)Location: Chromosome
Compound: Tellurium (Te)Description: Tellurite resistance protein TrgA; Confers tellurite resistance; membrane associated protein; Together with TrgB, it forms an operon; trgA gene alone does not encode resistance.
Length (amino acid): 146
Reference: O'Gara et al. 1997; Pubmed- 9406390
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Similar resistance genes in 'BacMet Predicted database' |
trgB | BacMet ID: BAC0395Code for: Enzyme
Family: Nudix hydrolase familySequence: FASTA
Cross-database IDs: Link
Organism: Rhodobacterales bacterium Y4I, Rhodobacter capsulatusLocation: Chromosome
Compound: Tellurium (Te), Copper (Cu)Description: Tellurite resistance protein TrgB; Together with TrgA, it forms an operon
Length (amino acid): 361
Reference: O'Gara et al. 1997; Pubmed- 9406390, Rademacher et al. 2012; Pubmed- 22767205
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Similar resistance genes in 'BacMet Predicted database' |
triA | BacMet ID: BAC0396Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Yersinia pseudotuberculosis serotype I (strain IP32953)Location: Plasmid pYptb32953 (Yersinia pseudotuberculosis serotype I (strain IP32953) ), Plasmid pCROD2 (Citrobacter rodentium (strain ICC168))
Compound: Triclosan [class: Phenolic compounds]Description: Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein TriA; Part of the TriABC-opmH triclosan efflux pump system. TriABC-opmH is the only known RND pump system requires two MFPs (TriA and TriB) to work
Length (amino acid): 205
Reference: Mima et al. 2007; Pubmed- 17720796
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Similar resistance genes in 'BacMet Predicted database' |
triB | BacMet ID: BAC0397Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Yersinia pseudotuberculosis serotype I (strain IP32953)Location: Plasmid pYptb32953 (Yersinia pseudotuberculosis serotype I (strain IP32953) ), Plasmid p29930 (Yersinia enterocolitica)
Compound: Triclosan [class: Phenolic compounds]Description: Resistance-Nodulation-Cell Division (RND) efflux membrane fusion protein TriB; Part of the TriABC-opmH triclosan efflux pump system. TriABC-opmH is the only known RND pump system requires two MFPs (TriA and TriB) to work
Length (amino acid): 97
Reference: Mima et al. 2007; Pubmed- 17720796
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Similar resistance genes in 'BacMet Predicted database' |
triC | BacMet ID: BAC0398Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Yersinia pseudotuberculosis serotype I (strain IP32953)Location: Plasmid pYptb32953 (Yersinia pseudotuberculosis serotype I (strain IP32953) ), Plasmid p29930 (Yersinia enterocolitica)
Compound: Triclosan [class: Phenolic compounds]Description: Resistance-Nodulation-Cell Division (RND) efflux transporter triC; Part of the TriABC-opmH triclosan efflux pump system; TriABC-opmH is the only known RND pump system requires two MFPs (TriA and TriB) to work
Length (amino acid): 915
Reference: Mima et al. 2007; Pubmed- 17720796
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Similar resistance genes in 'BacMet Predicted database' |
troA | BacMet ID: BAC0399Code for: Binding protein
Family: ABC superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Treponema pallidum (strain Nichols)Location: Chromosome
Compound: Zinc (Zn), Manganese (Mn), Iron (Fe)Description: Periplasmic zinc-binding protein TroA; encodes the solute binding protein (SBP), Part of an ATP-driven transport system TroABCD for zinc. Substrate-binding protein involved in the transport of zinc across the cytoplasmic membrane.
Length (amino acid): 308
Reference: Hazlett et al. 2003; Pubmed- 12668673
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Similar resistance genes in 'BacMet Predicted database' |
troB | BacMet ID: BAC0400Code for: Binding protein
Family: ABC superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Treponema pallidum (strain Nichols)Location: Chromosome
Compound: Zinc (Zn), Manganese (Mn), Iron (Fe)Description: Zinc transport system ATP-binding protein TroB; cytoplasmic membrane permeases; Part of an ATP-driven transport system TroABCD for zinc
Length (amino acid): 266
Reference: Hazlett et al. 2003; Pubmed- 12668673
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Similar resistance genes in 'BacMet Predicted database' |
troC | BacMet ID: BAC0401Code for: Membrane Transporter
Family: ABC-3 integral membrane protein familySequence: FASTA
Cross-database IDs: Link
Organism: Treponema pallidum (strain Nichols)Location: Chromosome
Compound: Zinc (Zn), Manganese (Mn), Iron (Fe)Description: Zinc transport system membrane protein TroC; cytoplasmic membrane permeases; Part of an ATP-driven transport system TroABCD for zinc
Length (amino acid): 298
Reference: Hazlett et al. 2003; Pubmed- 12668673
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Similar resistance genes in 'BacMet Predicted database' |
troD | BacMet ID: BAC0402Code for: Membrane Transporter
Family: ABC-3 integral membrane protein familySequence: FASTA
Cross-database IDs: Link
Organism: Treponema pallidum (strain Nichols)Location: Chromosome
Compound: Zinc (Zn), Manganese (Mn), Iron (Fe)Description: Zinc transport system membrane protein TroD; Part of an ATP-driven transport system TroABCD for zinc.
Length (amino acid): 367
Reference: Hazlett et al. 2003; Pubmed- 12668673
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Similar resistance genes in 'BacMet Predicted database' |
troR | BacMet ID: BAC0403Code for: Repressor
Family: ABC superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Treponema pallidum (strain Nichols)Location: Chromosome
Compound: Zinc (Zn), Manganese (Mn), Iron (Fe)Description: An iron activated repressor protein TroR of the troABCD transport system
Length (amino acid): 153
Reference: Hazlett et al. 2003; Pubmed- 12668673
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Similar resistance genes in 'BacMet Predicted database' |
ttgA | BacMet ID: BAC0404Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putida (Arthrobacter siderocapsulatus)Location: Chromosome
Compound: n-hexane [class: Alkane], Toluene [class: Aromatic hydrocarbons], Dimethylphthalate [class: Pthalate], Styrene [class: Polystyrenes], m-xylene [class: Aromatic hydrocarbons], Ethylbenzene [class: Aromatic hydrocarbons], Propylbenzene [class: Aromatic hydrocarbons]Description: Toluene efflux pump periplasmic linker protein TtgA; The periplasmic linker protein component of a constitutive organic solvent efflux system ttgABC. Involved in export of toluene, styrene, m-xylene, propylbenzene and ethylbenzene. Also Exports AMP and the antibiotics carbenicillin, nalidixic acid, chloramphenicol and tetracycline.
Length (amino acid): 384
Reference: Ramos et al. 1998; Pubmed- 9642183, Fernandes et al. 2003; Pubmed- 13678823
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Similar resistance genes in 'BacMet Predicted database' |
ttgB | BacMet ID: BAC0405Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putida (Arthrobacter siderocapsulatus)Location: Chromosome
Compound: n-hexane [class: Alkane], Toluene [class: Aromatic hydrocarbons], Dimethylphthalate [class: Pthalate], Styrene [class: Polystyrenes], m-xylene [class: Aromatic hydrocarbons], Ethylbenzene [class: Aromatic hydrocarbons], Propylbenzene [class: Aromatic hydrocarbons]Description: The inner membrane transporter component, ttgB of a constitutive organic solvent efflux system ttgABC. Involved in export of toluene, styrene, m-xylene, propylbenzene and ethylbenzene. Also Exports AMP and the antibiotics carbenicillin, nalidixic acid, chloramphenicol and tetracycline.
Length (amino acid): 1050
Reference: Ramos et al. 1998; Pubmed- 9642183, Fernandes et al. 2003; Pubmed- 13678823
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Similar resistance genes in 'BacMet Predicted database' |
ttgC | BacMet ID: BAC0406Code for: Efflux
Family: RND Superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putida (Arthrobacter siderocapsulatus)Location: Chromosome
Compound: n-hexane [class: Alkane], Toluene [class: Aromatic hydrocarbons], Dimethylphthalate [class: Pthalate], Styrene [class: Polystyrenes], m-xylene [class: Aromatic hydrocarbons], Ethylbenzene [class: Aromatic hydrocarbons], Propylbenzene [class: Aromatic hydrocarbons]Description: The outer membrane component ttgC of a constitutive organic solvent efflux system ttgABC. Is involved in Export of toluene, styrene, m-xylene, propylbenzene and ethylbenzene. Also exports AMP and the antibiotics carbenicillin, nalidixic acid, chloramphenicol and tetracycline.
Length (amino acid): 484
Reference: Ramos et al. 1998; Pubmed- 9642183, Fernandes et al. 2003; Pubmed- 13678823
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Similar resistance genes in 'BacMet Predicted database' |
ttgD | BacMet ID: BAC0407Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putida (Arthrobacter siderocapsulatus)Location: Chromosome
Compound: Toluene [class: Aromatic hydrocarbons], Styrene [class: Polystyrenes]Description: The periplasmic linker protein component, ttgD of an inducible organic solvent efflux pump ttgDEF. Involved in export of toluene and styrene but not of m-xylene, propylbenzene or ethylbenzene. Is not involved in antibiotic or AMP efflux
Length (amino acid): 382
Reference: Mosqueda et al. 2000; Pubmed- 10648517, Fernandes et al. 2003; Pubmed- 13678823
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Similar resistance genes in 'BacMet Predicted database' |
ttgE | BacMet ID: BAC0408Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putida (Arthrobacter siderocapsulatus)Location: Chromosome
Compound: Toluene [class: Aromatic hydrocarbons], Styrene [class: Polystyrenes]Description: The inner membrane transporter component, ttgE of an inducible organic solvent efflux pump ttgDEF. Involved in export of toluene and styrene but not of m-xylene, propylbenzene or ethylbenzene. Is not involved in antibiotic or AMP efflux.
Length (amino acid): 1046
Reference: Mosqueda et al. 2000; Pubmed- 10648517, Fernandes et al. 2003; Pubmed- 13678823
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Similar resistance genes in 'BacMet Predicted database' |
ttgF | BacMet ID: BAC0409Code for: Efflux
Family: RND Superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putida (Arthrobacter siderocapsulatus)Location: Chromosome
Compound: Toluene [class: Aromatic hydrocarbons], Styrene [class: Polystyrenes]Description: The outer membrane component, ttgF of an inducible organic solvent efflux pump ttgDEF. Involved in export of toluene and styrene but not of m-xylene, propylbenzene or ethylbenzene. Is not involved in antibiotic or AMP efflux.
Length (amino acid): 480
Reference: Mosqueda et al. 2000; Pubmed- 10648517, Fernandes et al. 2003; Pubmed- 13678823
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Similar resistance genes in 'BacMet Predicted database' |
ttgG | BacMet ID: BAC0410Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putida (Arthrobacter siderocapsulatus)Location: Plasmid pGRT1 (Pseudomonas putida (Arthrobacter siderocapsulatus))
Compound: Toluene [class: Aromatic hydrocarbons], Styrene [class: Polystyrenes], m-xylene [class: Aromatic hydrocarbons], Ethylbenzene [class: Aromatic hydrocarbons], Propylbenzene [class: Aromatic hydrocarbons]Description: The periplasmic linker component ttgG, of an organic solvent efflux pump ttgGHI. Involved in export of a number of organic solvents, including toluene and styrene. This is the most important solvent efflux pump in this strain, although it can Export AMP and some antibiotics.
Length (amino acid): 391
Reference: Rojas et al. 2001; Pubmed- 11395460, Fernandes et al. 2003; Pubmed- 13678823
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Similar resistance genes in 'BacMet Predicted database' |
ttgH | BacMet ID: BAC0411Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putida (Arthrobacter siderocapsulatus)Location: Plasmid pGRT1 (Pseudomonas putida (Arthrobacter siderocapsulatus))
Compound: Toluene [class: Aromatic hydrocarbons], Styrene [class: Polystyrenes], m-xylene [class: Aromatic hydrocarbons], Ethylbenzene [class: Aromatic hydrocarbons], Propylbenzene [class: Aromatic hydrocarbons]Description: The inner membrane transporter component, ttgH of an organic solvent efflux pump ttgGHI. Involved in Export of a number of organic solvents, including toluene and styrene. This is the most important solvent efflux pump in this strain, although it can Export AMP and some antibiotics
Length (amino acid): 1049
Reference: Rojas et al. 2001; Pubmed- 11395460, Fernandes et al. 2003; Pubmed- 13678823
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Similar resistance genes in 'BacMet Predicted database' |
ttgI | BacMet ID: BAC0412Code for: Efflux
Family: RND Superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putida (Arthrobacter siderocapsulatus)Location: Plasmid pGRT1 (Pseudomonas putida (Arthrobacter siderocapsulatus))
Compound: Toluene [class: Aromatic hydrocarbons], Styrene [class: Polystyrenes], m-xylene [class: Aromatic hydrocarbons], Ethylbenzene [class: Aromatic hydrocarbons], Propylbenzene [class: Aromatic hydrocarbons]Description: The outer membrane component, ttgI of an organic solvent efflux pump ttgGHI. Involved in export of a number of organic solvents, including toluene and styrene. This is the most important solvent efflux pump in this strain, although it can Export AMP and some antibiotics.
Length (amino acid): 470
Reference: Rojas et al. 2001; Pubmed- 11395460, Fernandes et al. 2003; Pubmed- 13678823
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Similar resistance genes in 'BacMet Predicted database' |
ttgR | BacMet ID: BAC0413Code for: Regulator
Family: Contains 1 HTH tetR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putida (Arthrobacter siderocapsulatus)Location: Chromosome
Compound: n-hexane [class: Alkane], Toluene [class: Aromatic hydrocarbons], Dimethylphthalate [class: Pthalate], Styrene [class: Polystyrenes], m-xylene [class: Aromatic hydrocarbons], Ethylbenzene [class: Aromatic hydrocarbons], Propylbenzene [class: Aromatic hydrocarbons]Description: Toluene efflux pump ttgABC operon repressor ttgR; Represses expression from the ttgABC operon promoter and its own expression. Binds to a promoter region between the divergently transcribed ttgR and ttgABC genes/operons; in the presence of chloramphenicol or tetracycline this binding no longer occurs and ttgR and ttgABC are derepressed. This suggests that TtgR binds these antibiotics.
Length (amino acid): 210
Reference: Duque et al. 2001; Pubmed- 11251828, Teran et al. 2003; Pubmed- 14506010, Fernandes et al. 2003; Pubmed- 13678823
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Similar resistance genes in 'BacMet Predicted database' |
ttgT | BacMet ID: BAC0414Code for: Regulator
Family: Contains 1 HTH iclR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putida (Arthrobacter siderocapsulatus)Location: Chromosome
Compound: Toluene [class: Aromatic hydrocarbons], Styrene [class: Polystyrenes]Description: Regulator of the ttgDEF efflux pump ttgT; Can regulate the ttgDEF system expression in ttgV-deficient condition; effect of TtgT on ttgGHI Expression is not obvious when TtgV is present but becomes relevant in its absence
Length (amino acid): 260
Reference: Teran et al. 2007; Pubmed- 17986203, Fernandes et al. 2003; Pubmed- 13678823
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Similar resistance genes in 'BacMet Predicted database' |
ttgV | BacMet ID: BAC0415Code for: Regulator
Family: Isocitrate lyase regulator (IclR) familySequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putida (Arthrobacter siderocapsulatus)Location: Plasmid pGRT1 (Pseudomonas putida (Arthrobacter siderocapsulatus))
Compound: Toluene [class: Aromatic hydrocarbons], Styrene [class: Polystyrenes]Description: HTH-type transcriptional regulator TtgV; Represses the expression of the ttgGHI and ttgVW operons. Binds to the ttgGHI / ttgVW intergenic region, probably preventing binding of RNA polymerase; ttgV dissociates from this region in the presence of 1-hexanol, can regulate the ttgDEF expression as well; The ttgVW operon is induced by toluene and styrene, but not by the antibiotics carbenicillin, chloramphenicol, nalidixic acid, tetracycline or gentamicin
Length (amino acid): 259
Reference: Teran et al. 2007; Pubmed- 17986203, Rojas et al. 2003; Pubmed- 12896994, Rodriguez-Herva et al. 2007; Pubmed- 17504492
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Similar resistance genes in 'BacMet Predicted database' |
ttgW | BacMet ID: BAC0416Code for: Regulator
Family: Contains 1 HTH tetR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Pseudomonas putida (Arthrobacter siderocapsulatus)Location: Plasmid pGRT1 (Pseudomonas putida (Arthrobacter siderocapsulatus))
Compound: Toluene [class: Aromatic hydrocarbons], Styrene [class: Polystyrenes]Description: HTH-type transcriptional regulator TtgW; does not seem to be involved in regulation of the ttgGHI or ttgVW operons; The ttgVW operon is induced by toluene and styrene, but not by the antibiotics carbenicillin, chloramphenicol, nalidixic acid, tetracycline or gentamicin
Length (amino acid): 134
Reference: Rojas et al. 2003; Pubmed- 12896994, Fernandes et al. 2003; Pubmed- 13678823
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Similar resistance genes in 'BacMet Predicted database' |
tunR | BacMet ID: BAC0601Code for: Regulator
Family: TunR familySequence: FASTA
Cross-database IDs: Link
Organism: Desulfovibrio vulgaris Hildenborough (strain GZ6027)Location: Chromosome
Compound: Tungsten (W), Molybdenum (Mo)Description: Tungstate-responsive regulator, TunR. It controls tungstate and molybdate homeostasis in sulfate-reducing deltaproteobacteria. TunR functions as an activator of the modA, modBC, and tunR genes in the absence of tungstate and repressed by tungstate. Regulates the ModABC transport system in Desulfovibrio spp.
Length (amino acid): 403
Reference: Kazarov et al. 2013; Pubmed- 23913324
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Similar resistance genes in 'BacMet Predicted database' |
tupA | BacMet ID: BAC0605Code for: Binding protein
Family: ABC superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Eubacterium acidaminophilumLocation: Chromosome
Compound: Tungsten (W)Description: Extracellular tungstate binding protein.
Length (amino acid): 286
Reference: Makdessi et al. 2001; Pubmed- 11292832
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Similar resistance genes in 'BacMet Predicted database' |
tupB | BacMet ID: BAC0606Code for: Enzyme
Family: ABC superfamily, binding-protein-dependent transport system permease familySequence: FASTA
Cross-database IDs: Link
Organism: Eubacterium acidaminophilumLocation: Chromosome
Compound: Tungsten (W)Description: Permease component of tungstate ABC transporter. TupB is an inner membrane protein.
Length (amino acid): 228
Reference: Makdessi et al. 2001; Pubmed- 11292832
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Similar resistance genes in 'BacMet Predicted database' |
tupC | BacMet ID: BAC0607Code for: Enzyme
Family: ABC superfamily, ATPase familySequence: FASTA
Cross-database IDs: Link
Organism: Eubacterium acidaminophilumLocation: Chromosome
Compound: Tungsten (W)Description: ATPase component of tungstate ABC transporter.
Length (amino acid): 214
Reference: Makdessi et al. 2001; Pubmed- 11292832
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Similar resistance genes in 'BacMet Predicted database' |
vcaM | BacMet ID: BAC0417Code for: Binding protein
Family: ABC superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio choleraeLocation: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Rhodamine 6G [class: Xanthene], 4,6-diamidino-2-phenylindole (DAPI) [class: Diamidine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Acridine Orange [class: Acridine]Description: ABC transporter, ATP-binding protein VcaM; Inner membrane protein
Length (amino acid): 619
Reference: Huda et al. 2003; Pubmed- 12878498
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Similar resistance genes in 'BacMet Predicted database' |
vceA | BacMet ID: BAC0418Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio choleraeLocation: Chromosome
Compound: Sodium Deoxycholate (SDC) [class: Acid]Description: Part of the The VceCAB multidrug (hydrophobic compounds including deoxycholate (DOC), antibiotics, such as chloramphenicol and nalidixic acid, and the proton motive force uncoupler, cyanide carbonyl m-chlorophenylhydrazone (CCCP)) resistance pump; Can function with outer membrane OprM, an OMF family member instead of VceC
Length (amino acid): 395
Reference: Colmer et al. 1998; Pubmed- 9466256
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Similar resistance genes in 'BacMet Predicted database' |
vceB | BacMet ID: BAC0419Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio choleraeLocation: Chromosome
Compound: Sodium Deoxycholate (SDC) [class: Acid]Description: Part of the The VceCAB multidrug (hydrophobic compounds including deoxycholate (DOC), antibiotics, such as chloramphenicol and nalidixic acid, and the proton motive force uncoupler, cyanide carbonyl m-chlorophenylhydrazone (CCCP)) resistance pump; Can function with outer membrane OprM, an OMF family member instead of VceC
Length (amino acid): 511
Reference: Colmer et al. 1998; Pubmed- 9466256
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Similar resistance genes in 'BacMet Predicted database' |
vceC | BacMet ID: BAC0420Code for: Efflux
Family: RND superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)Location: Chromosome
Compound: Sodium Deoxycholate (SDC) [class: Acid]Description: Part of the The VceCAB multidrug (hydrophobic compounds including deoxycholate (DOC), antibiotics, such as chloramphenicol and nalidixic acid, and the proton motive force uncoupler, cyanide carbonyl m-chlorophenylhydrazone (CCCP)) resistance pump; Alpha-helical hairpin domain of Vibrio cholerae VceA play important roles in recognition/specificity/recruitment in the assembly of a functional, VceAB-OprM chimeric efflux pump
Length (amino acid): 484
Reference: Woolley et al. 2005; Pubmed- 16030246, Bai et al. 2010; Pubmed- 20206171
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Similar resistance genes in 'BacMet Predicted database' |
vceR | BacMet ID: BAC0421Code for: Regulator
Family: TetR (tetracycline resistance) familySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)Location: Chromosome
Compound: Sodium Deoxycholate (SDC) [class: Acid]Description: Repressor of the vceCAB operon, VceR; VceR regulates the VceCAB drug efflux pump operon by alternating between mutually exclusive conformations that bind either drugs or promoter DNA
Length (amino acid): 200
Reference: Woolley et al. 2005; Pubmed- 16030246, Borges-Walmsley et al. 2005; Pubmed- 15890203
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Similar resistance genes in 'BacMet Predicted database' |
vcmA | BacMet ID: BAC0422Code for: Efflux
Family: MATE familySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio chloeraeLocation: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], 4,6-diamidino-2-phenylindole (DAPI) [class: Diamidine], Hoechst 33342 [class: Bisbenzimide], Acriflavine [class: Acridine]Description: Multidrug efflux pump vcmA that functions as a Na+/drug antiporter. Confers resistance to norfloxacin, ciprofloxacin, ofloxacin, daunomycin, doxorubicin, streptomycin, kanamycin, ethidium bromide, 4',6'-diamidino-2-phenylindole and Acriflavine
Length (amino acid): 457
Reference: Huda et al. 2001; Punmed: 11583854
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Similar resistance genes in 'BacMet Predicted database' |
vcrM | BacMet ID: BAC0423Code for: Efflux
Family: MATE family, DinF-subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio cholerae non-O1Location: Chromosome
Compound: Acriflavine [class: Acridine], 4,6-diamidino-2-phenylindole (DAPI) [class: Diamidine], Hoechst 33342 [class: Bisbenzimide], Rhodamine 6G [class: Xanthene], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Ethidium Bromide [class: Phenanthridine]Description: A Na+/drug antiporter-type multidrug efflux pump vcrM
Length (amino acid): 445
Reference: Huda et al. 2002; Pubmed- 12906102
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Similar resistance genes in 'BacMet Predicted database' |
vexA | BacMet ID: BAC0527Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio cholerae serotype O1Location: Chromosome
Compound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Triton X-100 [class: Polyethylene glycol]Description: The function of vexAB efflux systems are redundant with one or more of the other V. cholerae RND efflux pumps. Works as VexAB-TolC efflux system.
Length (amino acid): 368
Reference: Bina et al. 2006; Pubmed- 16804679
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Similar resistance genes in 'BacMet Predicted database' |
vexB | BacMet ID: BAC0424Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio cholerae serotype O1Location: Chromosome
Compound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Triton X-100 [class: Polyethylene glycol]Description: Multidrug efflux transporter VexB. The function of vexAB efflux systems are redundant with one or more of the other V. cholerae RND efflux pumps. A double mutant of vexAB and vexCD showed a marked increase in deoxycholate susceptibility, whereas no significant change in deoxycholate susceptibility was observed in vexAB or vexCD single-deletion mutants.
Length (amino acid): 1036
Reference: Bina et al. 2006; Pubmed- 16804679, Bina et al. 2008; Pubmed- 18490456, Rahman et al. 2007; Pubmed- 18037783
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Similar resistance genes in 'BacMet Predicted database' |
vexC | BacMet ID: BAC0528Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio cholerae serotype O1Location: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine]Description: The function of vexCD efflux systems are redundant with one or more of the other V. cholerae RND efflux pumps.
Length (amino acid): 364
Reference: Bina et al. 2006; Pubmed- 16804679, Bina et al. 2008; Pubmed- 18490456; Rahman et al. 2007; Pubmed- 18037783
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Similar resistance genes in 'BacMet Predicted database' |
vexD | BacMet ID: BAC0425Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio cholerae serotype O1Location: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine]Description: Multidrug efflux transporter VexD. The function of vexCD efflux systems are redundant with one or more of the other V. cholerae RND efflux pumps. A double mutant of vexAB and vexCD showed a marked increase in deoxycholate susceptibility, whereas no significant change in deoxycholate susceptibility was observed in vexAB or vexCD single-deletion mutants.
Length (amino acid): 1016
Reference: Bina et al. 2006; Pubmed- 16804679, Bina et al. 2008; Pubmed- 18490456; Rahman et al. 2007; Pubmed- 18037783
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Similar resistance genes in 'BacMet Predicted database' |
vexE | BacMet ID: BAC0426Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio cholerae 2740-80Location: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine]Description: Multidrug efflux transporter VexE; part of the vexEF-tolC efflux system; The function of vexEF efflux systems are redundant with one or more of the other V. cholerae RND efflux pumps. VexEF-TolC mediates resistance to various antimicrobials; ethidium efflux is Na+-dependent
Length (amino acid): 366
Reference: Rahman et al. 2007; Pubmed- 18037783, Bina et al. 2008; Pubmed- 18490456
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Similar resistance genes in 'BacMet Predicted database' |
vexF | BacMet ID: BAC0427Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio cholerae 2740-80Location: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine]Description: Multidrug efflux transporter VexF; part of the vexEF-tolC efflux system; The function of vexEF efflux systems are redundant with one or more of the other V. cholerae RND efflux pumps. VexEF-TolC mediates resistance to various antimicrobials; ethidium efflux is Na+-dependent. The VexF and VexM Pumps do not Function in Antimicrobial Resistance in vitro.
Length (amino acid): 1039
Reference: Rahman et al. 2007; Pubmed- 18037783, Bina et al. 2008; Pubmed- 18490456
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Similar resistance genes in 'BacMet Predicted database' |
vexH | BacMet ID: BAC0509Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio cholerae serotype O1Location: Chromosome
Compound: Triton X-100 [class: Polyethylene glycol], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid] Description: VexH contributes to antimicrobial resistance and exhibits broad substrate specificity. VexH is important for intestinal colonization and virulence factor production. V. cholerae RND efflux pumps (e.g. vexAB, vexCD etc.) have redundant functions, not only in antimicrobial resistance, but also in virulence factor production. RND efflux system contribute to V. cholerae pathogenesis in two ways. First, the RND efflux systems function to provide the bacterium with protection against antimicrobial compounds that are present in the host. Second, the RND efflux systems are required for efficient production of virulence factors. VexH can confer resistance to antibitics such as ampicillin and novobiocin.
Length (amino acid): 1036
Reference: Taylor et al. 2012; Pubmed- 22666485
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Similar resistance genes in 'BacMet Predicted database' |
vexK | BacMet ID: BAC0428Code for: Efflux
Family: RND superfamily, AcrB/AcrD/AcrF familySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)Location: Chromosome
Compound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Triton X-100 [class: Polyethylene glycol]Description: Multidrug efflux transporter vexK
Length (amino acid): 1037
Reference: Bina et al. 2008; Pubmed- 18490456
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Similar resistance genes in 'BacMet Predicted database' |
vmeA | BacMet ID: BAC0429Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio parahaemolyticusLocation: Chromosome
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Acriflavine [class: Acridine], Rhodamine 6G [class: Xanthene], Crystal Violet [class: Triarylmethane], Ethidium Bromide [class: Phenanthridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Deoxycholate (SDC) [class: Acid]Description: Membrane fusion protein VmeA
Length (amino acid): 379
Reference: Matsuo et al. 2007; Pubmed- 18048926
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Similar resistance genes in 'BacMet Predicted database' |
vmeB | BacMet ID: BAC0430Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio parahaemolyticusLocation: Chromosome
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Acriflavine [class: Acridine], Rhodamine 6G [class: Xanthene], Crystal Violet [class: Triarylmethane], Ethidium Bromide [class: Phenanthridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Deoxycholate (SDC) [class: Acid]Description: Inner membrane protein VmeB
Length (amino acid): 1053
Reference: Matsuo et al. 2007; Pubmed- 18048926
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Similar resistance genes in 'BacMet Predicted database' |
vmeC | BacMet ID: BAC0510Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio parahaemolyticus RIMD2210633Location: Chromosome
Compound: Sodium Glycocholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Cholate [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Rhodamine 6G [class: Xanthene], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Hoechst 33342 [class: Bisbenzimide]Description: VmeCD uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes with TolC.
Length (amino acid): 368
Reference: Matsuo et al. 2013; Pubmed- 23894076
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Similar resistance genes in 'BacMet Predicted database' |
vmeD | BacMet ID: BAC0511Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio parahaemolyticus RIMD2210633Location: Chromosome
Compound: Sodium Glycocholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Cholate [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Rhodamine 6G [class: Xanthene], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Ethidium Bromide [class: Phenanthridine], Acriflavine [class: Acridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Hoechst 33342 [class: Bisbenzimide]Description: VmeCD uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes with TolC.
Length (amino acid): 1040
Reference: Matsuo et al. 2013; Pubmed- 23894076
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Similar resistance genes in 'BacMet Predicted database' |
vmeE | BacMet ID: BAC0512Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio parahaemolyticus RIMD2210633Location: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid], Acriflavine [class: Acridine]Description: VmeEF uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes with TolC.
Length (amino acid): 364
Reference: Matsuo et al. 2013; Pubmed- 23894076
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Similar resistance genes in 'BacMet Predicted database' |
vmeF | BacMet ID: BAC0513Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio parahaemolyticus RIMD2210633Location: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid], Acriflavine [class: Acridine]Description: VmeEF uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes with TolC.
Length (amino acid): 1037
Reference: Matsuo et al. 2013; Pubmed- 23894076
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Similar resistance genes in 'BacMet Predicted database' |
vmeG | BacMet ID: BAC0517Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio parahaemolyticus RIMD2210633Location: Chromosome
Compound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid], Ethidium Bromide [class: Phenanthridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides]Description: Part of VexGHI efflux transporter.
Length (amino acid): 343
Reference: Matsuo et al. 2013; Pubmed- 23894076
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Similar resistance genes in 'BacMet Predicted database' |
vmeH | BacMet ID: BAC0518Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio parahaemolyticus RIMD2210633Location: Chromosome
Compound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid], Ethidium Bromide [class: Phenanthridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides]Description: Part of VexGHI efflux transporter.
Length (amino acid): 361
Reference: Matsuo et al. 2013; Pubmed- 23894076
|
Similar resistance genes in 'BacMet Predicted database' |
vmeI | BacMet ID: BAC0519Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio parahaemolyticus RIMD2210633Location: Chromosome
Compound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid], Ethidium Bromide [class: Phenanthridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides]Description: Part of VexGHI efflux transporter.
Length (amino acid): 1033
Reference: Matsuo et al. 2013; Pubmed- 23894076
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Similar resistance genes in 'BacMet Predicted database' |
vmeJ | BacMet ID: BAC0520Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio parahaemolyticus RIMD2210633Location: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Rhodamine 6G [class: Xanthene]Description: Part of the VexJK efflux transporter. VexJK uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes.
Length (amino acid): 371
Reference: Matsuo et al. 2013; Pubmed- 23894076
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Similar resistance genes in 'BacMet Predicted database' |
vmeK | BacMet ID: BAC0521Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio parahaemolyticus RIMD2210633Location: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Rhodamine 6G [class: Xanthene]Description: Part of the VexJK efflux transporter. VexJK uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes.
Length (amino acid): 1043
Reference: Matsuo et al. 2013; Pubmed- 23894076
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Similar resistance genes in 'BacMet Predicted database' |
vmeP | BacMet ID: BAC0522Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio parahaemolyticus RIMD2210633Location: Chromosome
Compound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid]Description: Part of the VexPQ efflux transpporter. VexPQ VexGHI uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes.
Length (amino acid): 380
Reference: Matsuo et al. 2013; Pubmed- 23894076
|
Similar resistance genes in 'BacMet Predicted database' |
vmeQ | BacMet ID: BAC0523Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio parahaemolyticus RIMD2210633Location: Chromosome
Compound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid]Description: Part of the VexPQ efflux transpporter. VexPQ VexGHI uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes.
Length (amino acid): 1046
Reference: Matsuo et al. 2013; Pubmed- 23894076
|
Similar resistance genes in 'BacMet Predicted database' |
vmeT | BacMet ID: BAC0524Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio parahaemolyticus RIMD2210633Location: Chromosome
Compound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid], Ethidium Bromide [class: Phenanthridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Acriflavine [class: Acridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)]Description: Part of the VexTUV efflux transporter.
Length (amino acid): 361
Reference: Matsuo et al. 2013; Pubmed- 23894076
|
Similar resistance genes in 'BacMet Predicted database' |
vmeU | BacMet ID: BAC0525Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio parahaemolyticus RIMD2210633Location: Chromosome
Compound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid], Ethidium Bromide [class: Phenanthridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Acriflavine [class: Acridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)]Description: Part of the VexTUV efflux transporter.
Length (amino acid): 353
Reference: Matsuo et al. 2013; Pubmed- 23894076
|
Similar resistance genes in 'BacMet Predicted database' |
vmeV | BacMet ID: BAC0526Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio parahaemolyticus RIMD2210633Location: Chromosome
Compound: Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid], Ethidium Bromide [class: Phenanthridine], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Acriflavine [class: Acridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)]Description: Part of the VexTUV efflux transporter.
Length (amino acid): 1019
Reference: Matsuo et al. 2013; Pubmed- 23894076
|
Similar resistance genes in 'BacMet Predicted database' |
vmeY | BacMet ID: BAC0514Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio parahaemolyticus RIMD2210633Location: Chromosome
Compound: Sodium Glycocholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Cholate [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate]Description: Part of the VexYZ efflux transporter. VmeYZ uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes with TolC.
Length (amino acid): 375
Reference: Matsuo et al. 2013; Pubmed- 23894076
|
Similar resistance genes in 'BacMet Predicted database' |
vmeZ | BacMet ID: BAC0515Code for: Efflux
Family: RND superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio parahaemolyticus RIMD2210633Location: Chromosome
Compound: Sodium Glycocholate [class: Acid], Sodium Taurocholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Cholate [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate]Description: Part of the VexYZ efflux transporter. VmeYZ uses a outer memberane protein such as TolC in E. coli or TolC-like VpoC in V. parahaemolyticus to function properly but complexes with VpoC can extrude various antimicrobial agents more effectively than complexes with TolC.
Length (amino acid): 1050
Reference: Matsuo et al. 2013; Pubmed- 23894076
|
Similar resistance genes in 'BacMet Predicted database' |
vmrA | BacMet ID: BAC0431Code for: Efflux
Family: MATE familySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio parahaemolyticusLocation: Chromosome
Compound: 4,6-diamidino-2-phenylindole (DAPI) [class: Diamidine], Acriflavine [class: Acridine], Ethidium Bromide [class: Phenanthridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)]Description: Na+-coupled multidrug efflux pump VmrA; confers resistance to cationic drugs (4',6'-diamidino-2-phenylindole (DAPI), Tetraphenylphosphonium (TPP), Acriflavine, ethidium)
Length (amino acid): 447
Reference: Chen et al. 2002; Pubmed- 11751837
|
Similar resistance genes in 'BacMet Predicted database' |
vpoC | BacMet ID: BAC0516Code for: Efflux
Family: RND superfamily, OMP familySequence: FASTA
Cross-database IDs: Link
Organism: Vibrio parahaemolyticus RIMD2210633Location: Chromosome
Compound: Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Chlorhexidine [class: Biguanides], Ethidium Bromide [class: Phenanthridine], Rhodamine 6G [class: Xanthene], Acriflavine [class: Acridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Hoechst 33342 [class: Bisbenzimide], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Sodium Cholate [class: Acid], Sodium Deoxycholate (SDC) [class: Acid], Sodium Glycocholate [class: Acid]Description: Homologue of E. coli TolC outer membrane protein, vpoC.
Length (amino acid): 442
Reference: Matsuo et al. 2013; Pubmed- 23894076
|
Similar resistance genes in 'BacMet Predicted database' |
wtpA | BacMet ID: BAC0602Code for: Binding protein
Family: ABC superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Pyrococcus furiosusLocation: Chromosome
Compound: Tungsten (W), Molybdenum (Mo)Description: Molybdate/tungstate-binding protein WtpA. Part of the ABC transporter complex WtpABC involved in molybdate/tungstate import. Binds tungstate and molybdate, with a preference for tungstate.
Length (amino acid): 345
Reference: Bevers et al. 2006; Pubmed- 16952940
|
Similar resistance genes in 'BacMet Predicted database' |
wtpB | BacMet ID: BAC0603Code for: Enzyme
Family: ABC superfamily, binding-protein-dependent transport system permease familySequence: FASTA
Cross-database IDs: Link
Organism: Pyrococcus furiosusLocation: Chromosome
Compound: Tungsten (W), Molybdenum (Mo)Description: Molybdate/tungstate transport system permease protein WtpB. Part of the ABC transporter complex WtpABC involved in molybdate/tungstate import. Probably responsible for the translocation of the substrate across the membrane.
Length (amino acid): 249
Reference: Bevers et al. 2006; Pubmed- 16952940
|
Similar resistance genes in 'BacMet Predicted database' |
wtpC | BacMet ID: BAC0604Code for: Enzyme
Family: ABC transporter superfamily. ATPase familySequence: FASTA
Cross-database IDs: Link
Organism: Pyrococcus furiosusLocation: Chromosome
Compound: Tungsten (W), Molybdenum (Mo)Description: Molybdate/tungstate import ATP-binding protein WtpC (ATPase). Part of the ABC transporter complex WtpABC involved in molybdate/tungstate import. Responsible for energy coupling to the transport system.
Length (amino acid): 344
Reference: Bevers et al. 2006; Pubmed- 16952940
|
Similar resistance genes in 'BacMet Predicted database' |
ybtP | BacMet ID: BAC0432Code for: Binding protein
Family: ABC superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Yersinia pestisLocation: Chromosome
Compound: Iron (Fe)Description: Fe3+-Yersiniabactin uptake transporter, YbtP; inner membrane lipoprotein
Length (amino acid): 600
Reference: Fetherston et al. 1999; Pubmed- 10231486
|
Similar resistance genes in 'BacMet Predicted database' |
ybtQ | BacMet ID: BAC0433Code for: Binding protein
Family: ABC superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Yersinia pestisLocation: Chromosome
Compound: Iron (Fe)Description: Permease and ATP-binding protein of yersiniabactin-iron ABC transport YbtQ
Length (amino acid): 600
Reference: Fetherston et al. 1999; Pubmed- 10231486
|
Similar resistance genes in 'BacMet Predicted database' |
ychH | BacMet ID: BAC0434Code for: Unknown
Family: Contains DUF2583 domainSequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Cadmium (Cd), Hydrogen Peroxide (H2O2) [class: Peroxides]Description: Stress protein YchH; response to Hydrogen Peroxide (H2O2), cadmium; plays a role in biofilm formation as well
Length (amino acid): 92
Reference: Lee et al. 2010; Pubmed- 19919618
|
Similar resistance genes in 'BacMet Predicted database' |
ycnJ | BacMet ID: BAC0556Code for: Membrane protein
Family: CopC and CopD familySequence: FASTA
Cross-database IDs: Link
Organism: Bacillus subtilis168Location: Chromosome
Compound: Copper (Cu)Description: Involved in uptake of extracellular oxidized copper under copper-limiting conditions. Highly induced under copper-limiting conditions. Down-regulated by YcnK, especially under high copper concentrations. Down-regulated by CsoR. Cells lacking this gene show a growth-defective phenotype under copper deprivation as well as a reduced intracellular content of copper.
Length (amino acid): 541
Reference: Chillappagari et al. 2009; Pubmed- 19168619
|
Similar resistance genes in 'BacMet Predicted database' |
ycnK | BacMet ID: BAC0557Code for: Regulator
Family: Contains 1 HTH deoR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Bacillus subtilis 168Location: Chromosome
Compound: Copper (Cu)Description: May act as a negative transcriptional regulator of ycnJ in the presence of copper. May use copper as a corepressor. Significantly induced under copper-limiting conditions. Cells lacking this gene show little or no difference in growth under copper deprivation, whereas possessing enhanced growth under copper excess conditions. Possess a high intracellular content of copper.
Length (amino acid): 190
Reference: Chillappagari et al. 2009; Pubmed- 19168619
|
Similar resistance genes in 'BacMet Predicted database' |
yddg/emrE | BacMet ID: BAC0435Code for: Efflux
Family: Drug/metabolite transporter (DMT) superfamily; Aromatic amino acid/Paraquat Exporter (ArAA/P-E) familySequence: FASTA
Cross-database IDs: Link
Organism: Salmonella typhimurium (strain 14028s/SGSC 2262)Location: Chromosome
Compound: Methyl Viologen [class: Paraquat]Description: Methyl viologen resistance protein YddG, Probable efflux pump. Required for resistance to methyl viologen. May function with OmpD porin
Length (amino acid): 293
Reference: Santiviago et al. 2002; Pubmed- 12410826
|
Similar resistance genes in 'BacMet Predicted database' |
ydeI | BacMet ID: BAC0436Code for: Binding protein
Family: Bacterial OB fold (BOF) protein familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Hydrogen Peroxide (H2O2) [class: Peroxides]Description: Stress protein YdeI; response to Hydrogen Peroxide (H2O2) and has a role in biofilm formation
Length (amino acid): 130
Reference: Lee et al. 2010; Pubmed- 19919618
|
Similar resistance genes in 'BacMet Predicted database' |
ydeO | BacMet ID: BAC0437Code for: Regulator
Family: Contains 1 HTH araC/xylS-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Hydrochloric acid (HCl) [class: Acid], Rhodamine 6G [class: Xanthene], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate]Description: HTH-type transcriptional regulator YdeO; Induces the Expression of gadE and mdtEF. Could also regulate the Expression of other genes involved in acid resistance
Length (amino acid): 253
Reference: Masuda et al. 2003; Pubmed- 12694615, Nishino et al. 2009; Pubmed- 19329985, Masuda et al. 2002; Pubmed- 12399493
|
Similar resistance genes in 'BacMet Predicted database' |
ydeP | BacMet ID: BAC0438Code for: Enzyme
Family: Prokaryotic molybdopterin-containing oxidoreductase familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Hydrochloric acid (HCl) [class: Acid]Description: Acid resistance protein YdeP; Involved in acid resistance
Length (amino acid): 759
Reference: Masuda et al. 2003; Pubmed- 12694615, Masuda et al. 2002; Pubmed- 12399493
|
Similar resistance genes in 'BacMet Predicted database' |
yfeA | BacMet ID: BAC0439Code for: Binding protein
Family: Bacterial solute-binding protein 9 familySequence: FASTA
Cross-database IDs: Link
Organism: Yersinia pestisLocation: Chromosome
Compound: Iron (Fe), Manganese (Mn)Description: Periplasmic chelated iron-binding protein YfeA; Part of an ATP-driven transport system YfeABCD for chelated iron
Length (amino acid): 311
Reference: Bearden et al. 1998; Pubmed- 9495751
|
Similar resistance genes in 'BacMet Predicted database' |
yfeB | BacMet ID: BAC0440Code for: Membrane Transporter
Family: ABC transporter superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Yersinia pestisLocation: Chromosome
Compound: Iron (Fe), Manganese (Mn)Description: Chelated iron transport system membrane protein YfeB; Part of an ATP-driven transport system YfeABCD for chelated iron
Length (amino acid): 296
Reference: Bearden et al. 1998; Pubmed- 9495751
|
Similar resistance genes in 'BacMet Predicted database' |
yfeC | BacMet ID: BAC0441Code for: Membrane Transporter
Family: ABC-3 integral membrane protein familySequence: FASTA
Cross-database IDs: Link
Organism: Yersinia pestisLocation: Chromosome
Compound: Iron (Fe), Manganese (Mn)Description: Chelated iron transport system membrane protein YfeC; Part of an ATP-driven transport system YfeABCD for chelated iron
Length (amino acid): 294
Reference: Bearden et al. 1998; Pubmed- 9495751
|
Similar resistance genes in 'BacMet Predicted database' |
yfeD | BacMet ID: BAC0442Code for: Membrane Transporter
Family: ABC-3 integral membrane protein familySequence: FASTA
Cross-database IDs: Link
Organism: Yersinia pestisLocation: Chromosome
Compound: Iron (Fe), Manganese (Mn)Description: Chelated iron transport system membrane protein YfeD; Part of an ATP-driven transport system YfeABCD for chelated iron
Length (amino acid): 297
Reference: Bearden et al. 1998; Pubmed- 9495751
|
Similar resistance genes in 'BacMet Predicted database' |
yfmO | BacMet ID: BAC0443Code for: Efflux
Family: MFS superfamilySequence: FASTA
Cross-database IDs: Link
Organism: Bacillus subtilis (strain 168) Location: Chromosome
Compound: Copper (Cu)Description: Multidrug efflux protein YfmO; Acts to efflux copper or a copper complex. YfmO can contribute to copper resistance; Repressed by YfmP
Length (amino acid): 396
Reference: Gaballa et al. 2003; Pubmed- 14663075
|
Similar resistance genes in 'BacMet Predicted database' |
yfmP | BacMet ID: BAC0444Code for: Regulator
Family: Contains 1 HTH merR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Bacillus subutilis (strain 168)Location: Chromosome
Compound: Copper (Cu)Description: HTH-type transcriptional regulator YfmP; repressor of the yfmOP operon. A mutation in yfmP leads to overexpression of yfmO, probably causing a decrease in cellular copper that is eventually responsible for a reduced copper induction of copZA. YfmP is autoregulated. There is no induction with copper or other metals.
Length (amino acid): 140
Reference: Gaballa et al. 2003; Pubmed- 14663075
|
Similar resistance genes in 'BacMet Predicted database' |
ygiW | BacMet ID: BAC0445Code for: Unknown
Family: Bacterial OB fold (BOF) protein familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coliLocation: Plasmid pMR-1 (Shewanella oneidensis (strain MR-1))
Compound: Cadmium (Cd), Tributyltin (TBT) [class: Organo-tin], Hydrogen Peroxide (H2O2) [class: Peroxides]Description: Protein YgiW; located in periplasm; responsible for tributyltin (TBT) resistance; response to hydrogen peroxide (H2O2), cadmium ions ; has a role in biofim formation
Length (amino acid): 130
Reference: Lee et al. 2010; Pubmed- 19919618
|
Similar resistance genes in 'BacMet Predicted database' |
yhcN | BacMet ID: BAC0446Code for: Unknown
Family: BhsA/McbA familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Cadmium (Cd), Hydrogen Peroxide (H2O2) [class: Peroxides], Hydrochloric acid (HCl) [class: Acid]Description: Outer membrane protein YhcN; stress response protein
Length (amino acid): 87
Reference: Lee et al. 2010; Pubmed- 19919618
|
Similar resistance genes in 'BacMet Predicted database' |
yieF | BacMet ID: BAC0541Code for: Enzyme
Family: SsuE familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli K12Location: Chromosome
Compound: Chromium (Cr), Vanadium (V), Molybdenum (Mo), Methylene Blue [class: Thiazinium]Description: A chromate reductase. Reduces chromate (Cr(VI)) to Cr(III)
Length (amino acid): 188
Reference: Ackerley et al. 2004; Pubmed- 14766567
|
Similar resistance genes in 'BacMet Predicted database' |
yjaA | BacMet ID: BAC0447Code for: Unknown
Family: UnknownSequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Cadmium (Cd), Hydrogen Peroxide (H2O2) [class: Peroxides], Hydrochloric acid (HCl) [class: Acid]Description: Stress response protein YjaA; a YjaA mutant strain is sensitive to hydrogen peroxide and acid
Length (amino acid): 127
Reference: Lee et al. 2010; Pubmed- 19919618
|
Similar resistance genes in 'BacMet Predicted database' |
ykkC | BacMet ID: BAC0448Code for: Efflux
Family: Small multidrug resistance (SMR) protein family. YkkC/YkkD subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Bacillus subtilis (strain 168)Location: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Crystal Violet [class: Triarylmethane], Methyl Viologen [class: Paraquat]Description: Multidrug resistance protein YkkC; Part of a heterooligomeric drug resistance efflux pump ykkCD; Confers resistance to a broad range of toxic compounds such as cationic dyes, neutral and anionic antimicrobials
Length (amino acid): 112
Reference: Jack et al. 2000; Pubmed- 10735877
|
Similar resistance genes in 'BacMet Predicted database' |
ykkD | BacMet ID: BAC0449Code for: Efflux
Family: Small multidrug resistance (SMR) protein family. YkkC/YkkD subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Bacillus subtilis (strain 168)Location: Chromosome
Compound: Ethidium Bromide [class: Phenanthridine], Crystal Violet [class: Triarylmethane], Methyl Viologen [class: Paraquat]Description: Multidrug resistance protein YkkD; Part of a heterooligomeric drug resistance efflux pump ykkCD; Confers resistance to a broad range of toxic compounds such as cationic dyes, neutral and anionic antimicrobials
Length (amino acid): 105
Reference: Jack et al. 2000; Pubmed- 10735877
|
Similar resistance genes in 'BacMet Predicted database' |
ymgB/ariR | BacMet ID: BAC0450Code for: Binding protein
Family: AriR familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Plasmid pPag3 (Pantoea vagans (strain C9-1) (Pantoea agglomerans (strain C9-1)))
Compound: Hydrochloric Acid (HCl) [class: Acid], Hydrogen Peroxide (H2O2) [class: Peroxides]Description: Two-component-system connector protein YmgB/AriR; a connector protein for RcsB/C regulation of biofilm and acid-resistance, providing additional signal input into the two-component signaling pathway. May serve to stimulate biofilm maturation, via the Rcs phosphorelay. Regulates expression of genes involved in acid-resistance and biofilm formation, including the RcsB/C two-component system. May be a non-specific DNA-binding protein that binds genes and/or intergenic regions via a geometric recognition. Also confers resistance to H2O2. Overexpression at 28 and 16 degrees Celsius increases the production of colanic acid, an exopolysaccharide and matrix component, and reduces adhesive curli fimbriae expression. Both of these effects require RcsB; YmgB probably acts upstream of the RcsB/C system to stimulate the activity and not transcription of RcsB/C. 5-fluorouracil reduction in biofilm formation requires this protein. Deletion increases biofilm formation.
Length (amino acid): 88
Reference: Lee et al. 2007; Pubmed- 17765265
|
Similar resistance genes in 'BacMet Predicted database' |
yodD | BacMet ID: BAC0451Code for: Unknown
Family: Contains a DUF2525 domainSequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Cadmium (Cd), Hydrogen Peroxide (H2O2) [class: Peroxides], Hydrochloric acid (HCl) [class: Acid]Description: Stress protein YodD; a yodD mutant strain is sensitive to hydrogen peroxide and acid
Length (amino acid): 75
Reference: Lee et al. 2010; Pubmed- 19919618
|
Similar resistance genes in 'BacMet Predicted database' |
yqjH | BacMet ID: BAC0452Code for: Enzyme
Family: SIP oxidoreductase familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Iron (Fe), Nickel (Ni)Description: NADPH-dependent ferric-chelate reductase (Ferric siderophore reductase) YqjH; Plays a role in iron homeostasis under excess nickel conditions; Repressed by YqjI and Fur. YqjI is required for nickel-dependent regulation of yqjH, while Fur is required for iron- and cobalt-dependent regulation of yqjh
Length (amino acid): 254
Reference: Wang et al. 2011; Pubmed- 21097627
|
Similar resistance genes in 'BacMet Predicted database' |
zevA | BacMet ID: BAC0453Code for: Binding protein
Family: unknownSequence: FASTA
Cross-database IDs: Link
Organism: Haemophilus influenzaeLocation: Chromosome
Compound: Zinc (Zn)Description: Part of a zinc binding system, ZevAB, is critical for survival of nontypeable Haemophilus influenzae
Length (amino acid): 206
Reference: Rosadini et al. 2011; Pubmed- 21576338
|
Similar resistance genes in 'BacMet Predicted database' |
zevB | BacMet ID: BAC0454Code for: Binding protein
Family: Contains 1 NicO domainSequence: FASTA
Cross-database IDs: Link
Organism: Haemophilus influenzaeLocation: Chromosome
Compound: Zinc (Zn)Description: Part of a zinc binding system, ZevAB, is critical for survival of nontypeable Haemophilus influenzae
Length (amino acid): 322
Reference: Rosadini et al. 2011; Pubmed- 21576338
|
Similar resistance genes in 'BacMet Predicted database' |
ziaA | BacMet ID: BAC0455Code for: Enzyme
Family: Cation transport ATPase (P-type) family, Type IB subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Synechocystis sp. (strain PCC 6803 / Kazusa)Location: Chromosome
Compound: Zinc (Zn)Description: Zinc-transporting ATPase ziaA
Length (amino acid): 721
Reference: Thelwell et al. 1998: Pubmed- 9724772
|
Similar resistance genes in 'BacMet Predicted database' |
ziaR | BacMet ID: BAC0456Code for: Regulator
Family: Contains 1 HTH arsR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Synechocystis sp. (strain PCC 6803 / Kazusa)Location: Chromosome
Compound: Zinc (Zn)Description: Transcriptional repressor (ziaR) of the Expression of the ziaA gene. Controls zinc homeostasis by triggering ZiaA-mediated efflux of excess zinc into the periplasm.
Length (amino acid): 132
Reference: Thelwell et al. 1998: Pubmed- 9724772
|
Similar resistance genes in 'BacMet Predicted database' |
zinT/yodA | BacMet ID: BAC0457Code for: Binding protein
Family: calycin superfamily. ZinT familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Cadmium (Cd), Zinc (Zn)Description: Metal-binding protein (Cadmium-induced protein) ZinT; Function as a periplasmic zinc chaperone or mediate direct transport of zinc from the periplasm to the cytoplasm under zinc-limited conditions. Binds zinc with high affinity, and can also bind cadmium, mercury or nickel. Preferentially binds Zn2+ over Cd2+. Contains one high affinity metal binding site, and can bind additional metal ions at other sites; Repressed by Zur
Length (amino acid): 216
Reference: Stojnev et al. 2007; Pubmed- 17632755
|
Similar resistance genes in 'BacMet Predicted database' |
zipB | BacMet ID: BAC0458Code for: Porter
Family: Zrt- and Irt-like Protein (ZIP) familySequence: FASTA
Cross-database IDs: Link
Organism: Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) (Alcaligenes bronchisepticus)Location: Chromosome
Compound: Zinc (Zn), Cadmium (Cd)Description: zipB is a selective electrodiffusional channel; facilitates passive zinc uptake driven by zinc concentration gradients that are maintained by cellular zinc homeostasis
Length (amino acid): 309
Reference: Lin et al. 2010; Pubmed- 20876577
|
Similar resistance genes in 'BacMet Predicted database' |
zitB/ybgR | BacMet ID: BAC0459Code for: Efflux
Family: Cation diffusion facilitator (CDF) transporter familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Zinc (Zn)Description: Zinc transporter ZitB; Involved in zinc efflux across the cytoplasmic membrane, thus reducing zinc accumulation in the cytoplasm and rendering bacteria more resistant to zinc; contributes to Zn++ haemostatis at low (non-toxic) concentrations; Appears to be selective for zinc, not conferring resistance to cobalt nor cadmium
Length (amino acid): 313
Reference: Grass et al. 2001; Pubmed- 11443104, Lee et al. 2002; Pubmed- 12399046
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Similar resistance genes in 'BacMet Predicted database' |
zneB/hmxB | BacMet ID: BAC0460Code for: Efflux
Family: RND superfamily, MFP familySequence: FASTA
Cross-database IDs: Link
Organism: Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)Location: Plasmid megaplasmid CH34 (Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839)),
Compound: Zinc (Zn)Description: Membrane fusion protein (MFP-RND) heavy metal cation tricomponent efflux zneB
Length (amino acid): 385
Reference: De Angelis et al. 2010; Pubmed- 20534468
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Similar resistance genes in 'BacMet Predicted database' |
zntA/yhhO | BacMet ID: BAC0461Code for: Enzyme
Family: Cation transport ATPase (P-type) familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Lead (Pb), Cadmium (Cd), Zinc (Zn)Description: Lead, cadmium, zinc and mercury-transporting ATPase ZntA; Involved in export of lead, cadmium, zinc and mercury; located in inner cell membrane.
Length (amino acid): 732
Reference: Rensing et al. 1997; Pubmed- 9405611, Beard et al. 1997; Pubmed- 9364914
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Similar resistance genes in 'BacMet Predicted database' |
zntR/yhdM | BacMet ID: BAC0462Code for: Regulator
Family: Contains 1 HTH merR-type DNA-binding domainSequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Zinc (Zn)Description: Zinc-responsive transcriptional regulator zntR; regulates the zntA
Length (amino acid): 141
Reference: Brocklehurst et al. 1999; Pubmed-10048032, Singh et al. 1999; Pubmed- 10411736
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Similar resistance genes in 'BacMet Predicted database' |
znuA/yebL | BacMet ID: BAC0463Code for: Membrane Transporter
Family: ABC superfamily, bacterial solute-binding protein 9 familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Zinc (Zn)Description: High-affinity zinc uptake system protein ZnuA; Involved in the high-affinity zinc uptake transport system; located in periplasm
Length (amino acid): 310
Reference: Patzer et al. 1998; Pubmed- 9680209
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Similar resistance genes in 'BacMet Predicted database' |
znuB/yebI | BacMet ID: BAC0464Code for: Membrane Transporter
Family: ABC-3 integral membrane protein familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Zinc (Zn)Description: High-affinity zinc uptake system membrane protein ZnuB; Involved in the high-affinity zinc uptake transport system; located in cell inner membrane
Length (amino acid): 261
Reference: Patzer et al. 1998; Pubmed- 9680209
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Similar resistance genes in 'BacMet Predicted database' |
znuC/yebM | BacMet ID: BAC0465Code for: Binding protein
Family: ABC transporter superfamily. Zinc importer familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Zinc (Zn)Description: Zinc import ATP-binding protein ZnuC; part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Transcriptionally repressed by zur (zinc uptake regulator), in response to high extracellular zinc concentrations
Length (amino acid): 251
Reference: Patzer et al. 1998; Pubmed- 9680209
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Similar resistance genes in 'BacMet Predicted database' |
zraP | BacMet ID: BAC0466Code for: Binding protein
Family: ZraP familySequence: FASTA
Cross-database IDs: Link
Organism: Salmonella typhimurium (strain LT2/SGSC1412/ATCC 700720) Location: Chromosome
Compound: Zinc (Zn)Description: Zinc resistance-associated protein ZraP; Undergoes a specific Zn++ induced cleavage to release a carboxy-terminal Zn++ binding region; located in periplasm; Binds zinc. Could be an important component of the zinc-balancing mechanism; located in periplasm
Length (amino acid): 151
Reference: Noll et al. 1998; Pubmed- 9694902, Appia-Ayme et al. 2012; Pubmed- 22084975
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Similar resistance genes in 'BacMet Predicted database' |
zraR/hydH | BacMet ID: BAC0467Code for: Regulator
Family: Contains 1 response regulatory domain, 1 sigma-54 factor interaction domainSequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Zinc (Zn)Description: Transcriptional regulatory protein ZraR; Member of the two-component regulatory system ZraS/ZraR. When activated by ZraS it acts in conjunction with sigma-54 to regulate the Expression of zraP. Positively autoregulates the Expression of the zraSR operon.
Length (amino acid): 441
Reference: Leonshartsberger et al. 2001; Pubmed- 11243806
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Similar resistance genes in 'BacMet Predicted database' |
zraS/hydG | BacMet ID: BAC0468Code for: Regulator
Family: Contains 1 histidine kinase domainSequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Zinc (Zn), Lead (Pb)Description: Sensor protein ZraS; Member of the two-component regulatory system ZraS/ZraR. Functions as a membrane-associated protein kinase that phosphorylates ZraR in response to high concentrations of zinc or lead in the medium.
Length (amino acid): 465
Reference: Leonshartsberger et al. 2001; Pubmed- 11243806
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Similar resistance genes in 'BacMet Predicted database' |
zupT/ygiE | BacMet ID: BAC0469Code for: Porter
Family: ZIP transporter family, ZupT subfamilySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Zinc (Zn), Iron (Fe), Cobalt (Co), Nickel (Ni), Copper (Cu), Cadmium (Cd)Description: Zinc transporter ZupT; Mediates zinc uptake. May also transport other divalent cations such as copper and cadmium ions.
Length (amino acid): 257
Reference: Grass et al. 2005; Pubmed- 15716430
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Similar resistance genes in 'BacMet Predicted database' |
zur/yjbK | BacMet ID: BAC0470Code for: Regulator
Family: Fur familySequence: FASTA
Cross-database IDs: Link
Organism: Escherichia coli (strain K12)Location: Chromosome
Compound: Zinc (Zn)Description: Zinc uptake regulation protein zur; Acts as a negative controlling element, employing Zn2+ as a cofactor to bind the operator of the repressed genes (znuACB). Zinc uptake regulation protein.
Length (amino acid): 171
Reference: Patzer et al. 1998; Pubmed- 9680209, Patzer et al. 2000; Pubmed- 10816566, Li et al. 2009; Pubmed- 19552825
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Similar resistance genes in 'BacMet Predicted database' |