BLAST SEARCH ENGINE

Please read the BLAST help manual if you are not familiar with the BLAST search tool.

Choose program to use and database to search:

Program blastp blastx

Database BacMet Predicted Database BacMet Experimentally Confirmed Database

Enter sequences below in FASTA format

Or load it from local machine

Advanced options:

Set subsequence: From         To

The query sequence is filtered for low complexity regions by default.
Filter: (a) Low complexity (b) Mask for lookup table only

Expect (E-value) 0.0001 0.01 1 10 100 1000    Matrix PAM30 PAM70 BLOSUM80 BLOSUM62 BLOSUM45

Perform ungapped alignment

Frame shift penalty for blastx 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 25 30 50 1000 No OOF

Other advanced options:       

Output options:

Graphical Overview
Alignment view    Pairwise master-slave with identities master-slave without identities flat master-slave with identities flat master-slave without identities BLAST XML Hit Table
Descriptions        0 10 50 100 250 500
Alignments          0 10 50 100 250 500
Colour schema    No colour schema colour schema 1 colour schema 2 colour schema 3 colour schema 4 colour schema 5 colour schema 6