Gene_name | Experimentally Verified Resistance Gene Information | Predicted Resistance Gene Information |
arsH | BacMet ID: BAC0595Code for:
EnzymeFamily: NADPH-dependent FMN reductases familySequence: FASTACross-database IDs: LinkOrganism: Synechocystis sp. PCC 6803Location:
ChromosomeCompound: Menadione [class: Naphthoquinone]Description: ArsH from Synechocystis sp. does not cofer resistance to arsenic (reduction of arsenate) as the arsH of Synechocystis sp. lacks cyestein residues. arsH encodes an NADPH-flavin mononucleotide oxidoreductase. ArsH plays a role in the response to oxidative stress caused by arsenite.Length (amino acid):
206Reference: Hervas et al. 2012; Pubmed- 22304305, Lopez-Maury et al. 2003; Pubmed- 12949088
| Similar
resistance genes in 'BacMet Predicted database' |
chrB | BacMet ID: BAC0027Code for:
RegulatorFamily: Contains 1 Chromate resistance exported protein domainSequence: FASTACross-database IDs: LinkOrganism: Ochrobactrum triticiLocation:
Chromosome (transposon TnOtChr)Compound: Chromium (Cr), Methyl Viologen [class: Paraquat], Menadione [class: Naphthoquinone]Description: Part of chrBACF operon from the transposable element TnOtChr. Has a regulatory role for expression of the ChrA transporter.Length (amino acid):
312Reference: Branco et al. 2013; Pubmed- 24223748, Branco et al. 2008; Pubmed- 18776016
| Similar
resistance genes in 'BacMet Predicted database' |
chrC | BacMet ID: BAC0028Code for:
EnzymeFamily: Iron/manganese superoxide dismutase familySequence: FASTACross-database IDs: LinkOrganism: Ochrobactrum triticiLocation:
Chromosome (transposon TnOtChr)Compound: Chromium (Cr), Methyl Viologen [class: Paraquat], Menadione [class: Naphthoquinone]Description: Part of chrBACF operon from the transposable element TnOtChr. ChrC encodes a superoxide dismutase.Length (amino acid):
202Reference: Branco et al. 2008; Pubmed- 18776016
| Similar
resistance genes in 'BacMet Predicted database' |
chrF | BacMet ID: BAC0029Code for:
UnknownFamily: Contains 1 Chromate resistance exported protein domainSequence: FASTACross-database IDs: LinkOrganism: Ochrobactrum triticiLocation:
Chromosome (transposon TnOtChr)Compound: Chromium (Cr), Methyl Viologen [class: Paraquat], Menadione [class: Naphthoquinone]Description: Part of chrBACF operon from the transposable element TnOtChr.Length (amino acid):
150Reference: Branco et al. 2008; Pubmed- 18776016
| Similar
resistance genes in 'BacMet Predicted database' |
ideR | BacMet ID: BAC0498Code for:
RegulatorFamily: Contains 1 HTH dtxR-type DNA-binding domainSequence: FASTACross-database IDs: LinkOrganism: Mycobacterium tuberculosisLocation:
ChromosomeCompound: Iron (Fe), Hydrogen Peroxide (H2O2) [class: Peroxides], Plumbagin [class: Naphthoquinone]Description: Metal-dependent DNA-binding protein that controls transcription of many genes involved in iron metabolism. Acts as a repressor of siderophore biosynthesis and as a Positive modulator of iron storage. Also regulates expression of transporters, proteins involved in siderophore synthesis, iron storage and transcriptional regulators. Has a role in oxidative streee tolerance.Length (amino acid):
230Reference: Rodriguez et al. 2002; Pubmed- 12065475
| Similar
resistance genes in 'BacMet Predicted database' |
tolC | BacMet ID: BAC0393Code for:
EffluxFamily: RND Superfamily, OMP familySequence: FASTACross-database IDs: LinkOrganism: Escherichia coli (strain K12)Location:
ChromosomeCompound: Phenol [class: Phenolic compounds], Triclosan [class: Phenolic compounds], Sodium Deoxycholate (SDC) [class: Acid], Sodium Cholate [class: Acid], Sodium Taurodeoxycholate [class: Acid], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Proflavin [class: Acridine], Acriflavine [class: Acridine], Ethidium Bromide [class: Phenanthridine], Tetraphenylphosphonium (TPP) [class: Quaternary Ammonium Compounds (QACs)], Rhodamine 6G [class: Xanthene], Tetraphenylarsonium (TPA) [class: Quaternary Ammonium Compounds (QACs)], Cetrimide (CTM) [class: Quaternary Ammonium Compounds (QACs)], Dequalinium [class: Quaternary Ammonium Compounds (QACs)], Benzylkonium Chloride (BAC) [class: Quaternary Ammonium Compounds (QACs)], Plumbagin [class: Naphthoquinone]Description: Required for proper expression of outer membrane protein genes such as ompF, nmpC, protein 2, hemolysin, colicin V, or colicin E1. May be specialized for signal sequence independent, extracellular secretion in Gram-negative bacteria. Required for acrAB, mar efflux pumps to act as multidrug efflux pump.Length (amino acid):
493Reference: Hackett et al. 1983; Pubmed- 6312426, Fralick et al. 1996; Pubmed- 8824631, Sulavik et al. 2001; Pubmed- 11257026
| Similar
resistance genes in 'BacMet Predicted database' |
tolCsm | BacMet ID: BAC0507Code for:
EffluxFamily: RND superfamily, OMP familySequence: FASTACross-database IDs: LinkOrganism: Stenotrophomonas maltophilia (strain K279a)Location:
ChromosomeCompound: Acriflavine [class: Acridine], Carbonyl cyanide 3-chlorophenylhydrazone (CCCP) [class: Hydrazone], Crystal Violet [class: Triarylmethane], Methyl Viologen [class: Paraquat], Plumbagin [class: Naphthoquinone], Sodium Dodecyl Sulfate (SDS) [class: Organo-sulfate], Tetrachlorosalicylanilide (TCS) [class: Salicylanilide], Menadione [class: Naphthoquinone]Description: Outer membrane protein. pcm and tolCsm genes form an operon. A significant feature of TolCsm different from that of other tolC homologues of Enterobacteriaceae is that tolCsm is not transcribed alone, but is transcribed with the pcm gene.Length (amino acid):
452Reference: Huang et al. 2013; Pubmed- 23629016
| Similar
resistance genes in 'BacMet Predicted database' |