BacMet Experimentally Confirmed database

Result: Details of the source of prediction- vceC

Gene_nameExperimentally Verified Resistance Gene Information Predicted Resistance Gene Information
  • BacMet ID: BAC0420
  • Code for: Efflux
  • Family: RND superfamily, OMP family
  • Sequence: FASTA
  • Cross-database IDs: Link
  • Organism: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
  • Location: Chromosome
  • Compound: Sodium Deoxycholate (SDC) [class: Acid]
  • Description: Part of the The VceCAB multidrug (hydrophobic compounds including deoxycholate (DOC), antibiotics, such as chloramphenicol and nalidixic acid, and the proton motive force uncoupler, cyanide carbonyl m-chlorophenylhydrazone (CCCP)) resistance pump; Alpha-helical hairpin domain of Vibrio cholerae VceA play important roles in recognition/specificity/recruitment in the assembly of a functional, VceAB-OprM chimeric efflux pump
  • Length (amino acid): 484
  • Reference: Woolley et al. 2005; Pubmed- 16030246, Bai et al. 2010; Pubmed- 20206171

  • Similar resistance genes in 'BacMet Predicted database'

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