BacMet Database

BacMet Experimentally Confirmed database

Result: Details of the source of prediction- copB

Gene_name	Experimentally Verified Resistance Gene Information	Predicted Resistance Gene Information
copB	BacMet ID: BAC0626 Code for: Enzyme Family: Cation transport ATPase (P-type) family. Type IB subfamily Sequence: FASTA Cross-database IDs: Link Organism: Pseudomonas syringae pv. Tomato Location: Plasmid pPT23D Compound: Copper (Cu) Description: Copper resistance protein B. It mediates copper resistance by its sequestration in the outer membrane. Required for the copper-inducible expression of copper resistance; part of the copper resistance determinant system. Length (amino acid): 328 Reference: Mellano et al. 1988; Pubmed- 3372485, Cha et al. 1991; Pubmed- 1924351	Similar resistance genes in 'BacMet Predicted database'
copB	BacMet ID: BAC0627 Code for: Enzyme Family: Cation transport ATPase (P-type) family. Type IB subfamily Sequence: FASTA Cross-database IDs: Link Organism: Xanthomonas alfalfae subsp. Citrumelonis Location: Chromosome Compound: Copper (Cu) Description: Copper resistance protein B. Length (amino acid): 422 Reference: Behlau et al. 2011; Pubmed- 21515725	Similar resistance genes in 'BacMet Predicted database'
copB	BacMet ID: BAC0628 Code for: Enzyme Family: Cation transport ATPase (P-type) family. Type IB subfamily Sequence: FASTA Cross-database IDs: Link Organism: Xanthomonas citri subsp. Citri Location: Chromosome Compound: Copper (Cu) Description: Copper resistance protein B. Required for the copper-inducible expression of copper resistance; part of the copper resistance determinant system. Length (amino acid): 422 Reference: Behlau et al. 2011; Pubmed- 21515725	Similar resistance genes in 'BacMet Predicted database'
copB	BacMet ID: BAC0629 Code for: Enzyme Family: Cation transport ATPase (P-type) family. Type IB subfamily Sequence: FASTA Cross-database IDs: Link Organism: Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) Location: Chromosome Compound: Copper (Cu) Description: It is a thermophilic Cu2+-ATPase in Archaeoglobus fulgidus. Required for the copper-inducible expression of copper resistance; part of the copper resistance determinant system. Length (amino acid): 690 Reference: Mana-Capelli et al. 2003; Pubmed- 12876283,	Similar resistance genes in 'BacMet Predicted database'
copB	BacMet ID: BAC0079 Code for: Enzyme Family: Cation transport ATPase (P-type) family. Type IB subfamily Sequence: FASTA Cross-database IDs: Link Organism: Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258) Location: Chromosome Compound: Copper (Cu), Silver (Ag) Description: Efflux ATPases, located in same operone with copA; outer membrane protein, have 4 impefect repeats of octapeptide Asp-His-Ser-Gln/Lys-Met-Gln-Met; Required for the copper-inducible Expression of copper resistance. It is a pump for the extrusion of monovalent copper and silver ions, with copper probably being the natural substrate. Length (amino acid): 745 Reference: Odermatt et al. 1994; Pubmed- 8037745, Solioz et al. 1995; Pubmed- 7721839	Similar resistance genes in 'BacMet Predicted database'

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