BacMet Database

BacMet Experimentally Confirmed database

Result: Details of the source of prediction- copA

Gene_name	Experimentally Verified Resistance Gene Information	Predicted Resistance Gene Information
copA	BacMet ID: BAC0077 Code for: Enzyme Family: Multicopper oxidase (mco) family Sequence: FASTA Cross-database IDs: Link Organism: Pseudomonas syringae pv. Tomato Location: Plasmid pPT23D (Pseudomonas syringae pv. Tomato), Plasmid pRJ1004 (E. coli) Compound: Copper (Cu), Silver (Ag) Description: Encode for copper uptake ATPases; also resistant to Ag+ ; periplasmic protein; Probably involved in copper and silver Export. Mediates copper resistance by sequestration of copper in the periplasm along with the copper-binding protein CopC. May have oxidase activity. Length (amino acid): 609 Reference: Cha and Cooksey 1991; Pubmed- 1924351, Outten et al. 2001; Pubmed- 11399769	Similar resistance genes in 'BacMet Predicted database'
copA	BacMet ID: BAC0078 Code for: Enzyme Family: Cation transport ATPase (P-type) family Sequence: FASTA Cross-database IDs: Link Organism: Bacillus subtilis (strain 168) Location: Chromosome Compound: Copper (Cu) Description: Involved in copper export; The copZA operon is activated by CueR and indirectly repressed by YfmP Length (amino acid): 802 Reference: Banci et al. 2003; Pubmed- 14514665, Outten et al. 2001; Pubmed- 11399769	Similar resistance genes in 'BacMet Predicted database'
copA	BacMet ID: BAC0619 Code for: Enzyme Family: Cation transport ATPase (P-type) family, Type IB subfamily Sequence: FASTA Cross-database IDs: Link Organism: Pseudomonas putida PNL-MK25 Location: Chromosome Compound: Copper (Cu) Description: Part of copABCD operon, that encodes copper-binding and sequestering proteins for copper homeostasis in the copper-sensitive strain Pseudomonas putida PNL-MK25. Length (amino acid): 564 Reference: Adaikkalam et al. 2005; Pubmed- 15920618	Similar resistance genes in 'BacMet Predicted database'
copA	BacMet ID: BAC0620 Code for: Enzyme Family: Cation transport ATPase (P-type) family, Type IB subfamily Sequence: FASTA Cross-database IDs: Link Organism: Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258) Location: Chromosome Compound: Copper (Cu) Description: Probably involved in copper import under copper limiting conditions. Length (amino acid): 727 Reference: Odermatt et al. 1994; Pubmed- 8037745, Solioz et al. 1995; Pubmed- 7721839	Similar resistance genes in 'BacMet Predicted database'
copA	BacMet ID: BAC0621 Code for: Enzyme Family: Cation transport ATPase (P-type) family, Type IB subfamily Sequence: FASTA Cross-database IDs: Link Organism: Xanthomonas citri subsp. Citri Location: Chromosome Compound: Copper (Cu) Description: Copper resistance protein A. Length (amino acid): 623 Reference: Behlau et al. 2011; Pubmed- 21515725	Similar resistance genes in 'BacMet Predicted database'
copA	BacMet ID: BAC0622 Code for: Enzyme Family: Cation transport ATPase (P-type) family, Type IB subfamily Sequence: FASTA Cross-database IDs: Link Organism: Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) Location: Chromosome Compound: Copper (Cu), Silver (Ag) Description: Involved in copper and silver export. Length (amino acid): 804 Reference: Mandal et al. 2002; Pubmed- 11756450	Similar resistance genes in 'BacMet Predicted database'
copA	BacMet ID: BAC0623 Code for: Enzyme Family: Cation transport ATPase (P-type) family. Type IB subfamily Sequence: FASTA Cross-database IDs: Link Organism: Helicobacter pylori (Campylobacter pylori) Location: Chromosome Compound: Copper (Cu) Description: Probably involved in copper export. Part of copAP operons of Helicobacter pylori and Helicobacter felis. Length (amino acid): 741 Reference: Bayle et al. 1998; Pubmed- 9440521	Similar resistance genes in 'BacMet Predicted database'
copA	BacMet ID: BAC0624 Code for: Enzyme Family: Cation transport ATPase (P-type) family. Type IB subfamily Sequence: FASTA Cross-database IDs: Link Organism: Helicobacter felis (strain ATCC 49179 / NCTC 12436 / CS1) Location: Chromosome Compound: Copper (Cu) Description: Copper-transporting ATPase. part of copAP operon. Length (amino acid): 732 Reference: Bayle et al. 1998; Pubmed- 9440521	Similar resistance genes in 'BacMet Predicted database'
copA	BacMet ID: BAC0625 Code for: Enzyme Family: Cation transport ATPase (P-type) family. Type IB subfamily Sequence: FASTA Cross-database IDs: Link Organism: Xanthomonas alfalfae subsp. Citrumelonis Location: Chromosome Compound: Copper (Cu) Description: Copper resistance protein A. Required for the copper-inducible expression of copper resistance; part of the copper resistance determinant system. Length (amino acid): 622 Reference: Bayle et al. 1998; Pubmed- 9440521	Similar resistance genes in 'BacMet Predicted database'
hpcopA	BacMet ID: BAC0617 Code for: Enzyme Family: Cation transport ATPase (P-type) family, Type IB subfamily Sequence: FASTA Cross-database IDs: Link Organism: Helicobacter pylori (Campylobacter pylori) Location: Chromosome Compound: Copper (Cu) Description: Involved in copper export. Length (amino acid): 745 Reference: Ge et al. 1995; Pubmed- 7752900, Ge et al. 1996; Pubmed- 8961555	Similar resistance genes in 'BacMet Predicted database'

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